Os02g0128300

From RiceWiki
Revision as of 02:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0128300| Description = ENTH/VHS domain containing protein| Version = NM_001052304.1 GI:115443978 GeneID:4328174| Length = 6709 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0128300

Description

ENTH/VHS domain containing protein

Version

NM_001052304.1 GI:115443978 GeneID:4328174

Length

6709 bp

Definition

Oryza sativa Japonica Group Os02g0128300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1461552..1468260

Sequence Coding Region

1465310..1465414,1465959..1466027,1466332..1466658,1466744..1466957,1467170..1467267
,1467516..1467554,1467672..1468160

Expression

GEO Profiles:Os02g0128300

Genome Context

<gbrowseImage1> name=NC_008395:1461552..1468260 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1461552..1468260 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggcctcgacgacgagtgggacgacgacaagttcctcgccgagctcttccgcgcccaggacgaggccgtcgcctcccgcaaccctaaccccactccccctccccctcctcctcctcccgacctcatctcctacctcccgccgccctccacctcatcgtacccttcctcctccgccgccgccgccgcgcttccgctctcctacatcacccccgggccccatgtcttctccgccgcccctgttcacttcttgcctccccgcgagctctcccagcatccgcagggattcgacgtcgggctccgtgacttctcccctccgcgcgagctctcgcagcgcccggcggcggaggtgagcagccgcgagatcgtcgcggtgtcgtcgggcatcgccggtgctgatcgcttcagagggggcgggggcgggggcgcgcggagggagagggatgccagggaggcggctgatcggagggaggtcgagaggctcaagagggagctgaatcgtgtctcgaagcaaatgaacgacgtgaaaaacgaatgcagtgagctgaagaaagacaggacaaggaaagaccttgaaatcaaggctaaagaagcagagattcaaagtttgagaagggcaaatgtgggttctgctaacaaatatgccggcagtatggctatggatattgatcagtctgttcatgcccctgcaaatggggctttgcatactggggattcttgcttggcatccacgagaagagcagagacattaaatggtagaaacaaggagctcagttcccctcaagacggtctctgtttgaaccaaaggaatcaaacatatgcatctgaggtcttggaggaaagtgttcgctttgaatcaaaaggcagcaaacacaaggaaatcaagactgtaggggttcagacagatcttccagggaataacgaatatcttgagcacaagaaagtattggttgaccgtatctctagcaatctgtgtgcagtgtggggcatgccaactaacagtttgatggggaggagtctgatatcaaagatcctggtttcttgctcagaagaaattttgacacttgtccagtctacgggatcgctagacaagtgtgaagcctcttctgaagcgagctcatcggtcagaaatgctatttcccaagtatatgatatcatcataaagacgagcagtgatacaatacctatacaaactcttctcgaagcattgctaaatttggctgctgttggtaatgatgctgttgttagtagagccctgcggatgttacatagtgtcttgcagcacttgctgaataacagaacgatgtctaatcagaggtatgctttactactacattga</cdnaseq>

Protein Sequence

<aaseq>MDGLDDEWDDDKFLAELFRAQDEAVASRNPNPTPPPPPPPPDLI SYLPPPSTSSYPSSSAAAAALPLSYITPGPHVFSAAPVHFLPPRELSQHPQGFDVGLR DFSPPRELSQRPAAEVSSREIVAVSSGIAGADRFRGGGGGGARRERDAREAADRREVE RLKRELNRVSKQMNDVKNECSELKKDRTRKDLEIKAKEAEIQSLRRANVGSANKYAGS MAMDIDQSVHAPANGALHTGDSCLASTRRAETLNGRNKELSSPQDGLCLNQRNQTYAS EVLEESVRFESKGSKHKEIKTVGVQTDLPGNNEYLEHKKVLVDRISSNLCAVWGMPTN SLMGRSLISKILVSCSEEILTLVQSTGSLDKCEASSEASSSVRNAISQVYDIIIKTSS DTIPIQTLLEALLNLAAVGNDAVVSRALRMLHSVLQHLLNNRTMSNQRYALLLH</aaseq>

Gene Sequence

<dnaseqindica>2847..2951#2234..2302#1603..1929#1304..1517#994..1091#707..745#101..589#atcgaccccacccaccctctcccacttcccctctttctctctctcacctcgcgccgccgccgccgccgccgccggtgaggcgcggtgcgccgcgagggggatggacggcctcgacgacgagtgggacgacgacaagttcctcgccgagctcttccgcgcccaggacgaggccgtcgcctcccgcaaccctaaccccactccccctccccctcctcctcctcccgacctcatctcctacctcccgccgccctccacctcatcgtacccttcctcctccgccgccgccgccgcgcttccgctctcctacatcacccccgggccccatgtcttctccgccgcccctgttcacttcttgcctccccgcgagctctcccagcatccgcagggattcgacgtcgggctccgtgacttctcccctccgcgcgagctctcgcagcgcccggcggcggaggtgagcagccgcgagatcgtcgcggtgtcgtcgggcatcgccggtgctgatcgcttcagagggggcgggggcgggggcgcgcggagggagagggatgccagggaggcggctgatcggagggaggtcgagaggctcaaggtgaggtttgcgatggcgcattggcgcgtgcggtgtaaacatatgctcgtttggatgcttcgcttgcctgtgctcctcctaatgcttgtgatctgaaatacttgtttgcttctgcagagggagctgaatcgtgtctcgaagcaaatgaacgacgtggtgcgtatctcactagatgattctgttgtgctctaatgctgcgcagagctagtgcattttgctctagtttgagtctgctttcaaatgaggacttgcctaatacaattgggggggggggggcgctgggatatttgaacttacttgactactatacaatgtgatgttgtgaacagatgaaatgatcaatgcagatttaagttaaccggtatgatcaactagagatgagtttgtttcaatttcgaatgcagaaaaacgaatgcagtgagctgaagaaagacaggacaaggaaagaccttgaaatcaaggctaaagaagcagagattcaaagtttgagaagggcaaatgtgtaagtgacactctagtgctgtatttagtaacccatggtcttgtctcatcatgtcctggaatcgctcatgatttagccatgcatgctatctgaatgagaacaatttgaattgaaatgaaatagttctccttgaaccgttaattgacatgtgccatggctactgtatttgagtgcatgctcaatatcattgacatccctttttgtgtattcaggggttctgctaacaaatatgccggcagtatggctatggatattgatcagtctgttcatgcccctgcaaatggggctttgcatactggggattcttgcttggcatccacgagaagagcagagacattaaatggtagaaacaaggagctcagttcccctcaagacggtctctgtttgaaccaaaggaatcaaacatatgcatctgaggtcttggaggtagcttgtcttgcctgggcacattgctttctattatatggtgctagcatattccattagtgatctattctgctgtgattgctaggaaagtgttcgctttgaatcaaaaggcagcaaacacaaggaaatcaagactgtaggggttcagacagatcttccagggaataacgaatatcttgagcacaagaaagtattggttgaccgtatctctagcaatctgtgtgcagtgtggggcatgccaactaacagtttgatggggaggagtctgatatcaaagatcctggtttcttgctcagaagaaattttgacacttgtccagtctacgggatcgctagacaagtgtgaagcctcttctgaagcgagctcatcggtcagaaatgctatttcccaagtatatgatatcatcataaaggtaatagacatgccaaagatagaaaatatacatttatttttaattttcctctgcttcagcttgaactgaccatctattttgtggaatttgaacttttactaatcaaggcaaaaacttcagcttgaacggactatcttctctgtagtctgcactagatttcaacattgaatagggacaatgcattcatctccatatactgtagttagagtgttctctactttacttttagtttttcattccatgttactctattttatttgaattaatgtttcacattgtcaaattatctgttttgtccctgcagacgagcagtgatacaatacctatacaaactcttctcgaagcattgctaaatttggctgctgttggtaatgtatgaactgattatccaacttcatttacatgcttatatagtcatttacattgcattaccatttgtagtacatttctcaggtctatgattatgggcttccccactaggtctagaaaaaatagatgcggcattcgggacaacccaattttagtgcttcctattatgcaaggaagtcagaattactcagatcagtttcaaaccaagtttcatcatatacttgtggaaatatctagccggctgagaatcagttagcttgctgatttatttgaagaactagtaacaatagcttctcacatgcaaacttacatggctttaggttgagtttgttggacatacagtaactttaggttgagtttgttggacatacagtaactatctaagctgaagtaggcttttatttgtgatctattgtcatggttgtttttctgtagtgtgtgtgtgtgtgtgttgtggatgctgaattgaaccagtcaattttccaattaggcaattactcttattccttggacttaattatcatttttacctactgtttttttttcaggatgctgttgttagtagagccctgcggatgttacatagtgtcttgcagcacttgctgaataacagaacgatgtctaatcagaggtatgctttactactacattgaatatggttctagttaccatggaagtgtatttcataattggattcgtcactgaactcagatattgaccagccaaccttatcttatagaatagcagctactattgcattcaataccttaccaatgttctcttctgtaacctaccagtcagttcagttttgtattgcttgaattgaactttgaccataaatctctcttggaaaatgctatcttttaattctaaaatcatgagaaaatgaaagtacatttaaatacaaatctggcagtatcaccttagtgtcactaaatcagttagcctaattgttggcaaaactagagtttgattcttacaatgtgcatgccttggaaggtatagttgttaactgaccagctgtgcttcgagcaatttttgtgggctgctatcttcatccaggctgagcaatcaatcactgcatagtagaaataaagtagtatcagataaatgttgagaaatattaatagatattgatattgatttagcacggtgaattgtctttgttttctgttccattgtatttgttatttctgagagaattgggtggggtgggtttttattttgtagatgccttgtaatcaaccaagtatttgacataggcagcaatacaacaagaacgtgggtatatacaataatacgattgttcattattttttccttgtttataatgataggttctcatgcttatgaactttaatacgattttcctcagtgtaacatcaggaataatgtttctattgagccatgtgttaacaatactgttcacatggagcggaacagtcacaaaggtagctccacttcgctgaatacacctgatgcatcgagtctatcaagaagccatgatgggcttcacactgaaaacacacagcttccttttacagtctggacttcactcttcactgcaatgctacaaattgcggacaggcattcggaggagaatattcgtgttgatgcattatctataatgattatcattgcaaggacaagtgatcccaaagtggagcgggaaaagtaagcaatcacatgagtattatttctttctttaatcggttgcaatgctttacgctaatgataatgtgctgctactttcagattcggatttacttctgtaatggaaaaattgcatcaactgttgcagaaggaaaatggattgcttgttaagaagcattctgtggatctacttttcttgctattgaattgtaagttgtcaggcttatatatacttagtattagttttagaaatgaatgtgtcgtttcaagaatttttaaaggctaaatgaatgcttcacttcctctggtagaatacctgttatactggctcttttttctccatagctctgttttattggtgagcttgaaatgtgcccatctattgcagtggaattcgattcatgtttagttattgactatcaaccaccaccaactcaaatatttaaagtattagagaatatagctacagaaacgcttcatcagacaataactggtgcattaaatgcatgcaaaatgcaaaatggtgatctggagtctggacccttgcaacttctcgaacttaattctgcccttttgcaaagtcttgttgctagcttggctgcttggccaggatttaattagatcttgttcagtctatatacctgttaaaaaaatgtgctccaagaaataacatatatatttcttttcaagtctattcctattggaatactggatgttttggggtcataaatcatactccctccatcccaaattgatcatccgtttgtgcaccaagaccaaggataatttaaacagcatcaatcaagatgtcatgcacaatatgcacacattctcccacaatgcatgcatcgattaaaacacaatgcacaattacaccctttagcatgcacacattctcccgtgctgtattgattgtactccgatgaaatctgtgtccatgtggttatatgatcaatttgagaaattttagtttccactatatgatgatcaatttgggaaggagagtatttattttccattttgaagataaaacctttacctttctgttactttgttttctctctttaccgatatctggatttcctgttgctggtaggcccaacgacattgaagttgctatgcaatggaggtaaagatagccctgagcagattgaagctataagatgtgaaaatgatagatcacaagaagctataagctcaatttttaaggacctatctgaatgcttgagttgtagggcaacaagttctctggtatgttgctcctcttccagaccgtatattttcatttagatgtttagattgaaggctaacttccatattattaagaacatagactgcatatattgaaaaatagtaatattgttacttgccattctttgaaaaaaaggtgttgcatggtatttcttaaaggttttaaagctggagttctagagagaaacaaaagatgacataagttctactgttacattttacttccaacactggacaactaagaaaactattattttcaggggatcaagctttgtcgggtagttgtcactctgttagcatatatagcttcaagtggcaaattggggtatgaagtgcttctaggtccagttactgtccgtggtgccaatttcttggagttgatcatggaagtccttgcgtcacagatggaatatgacacagccctttcaaatggagaacatgagctattgaaagaaaggtgatcttgaacttcccatcctaaactgcaattttgaatatgttccttttttctccctctgtccacaaatacaagggattttggttatgttacatacccaaaatccctcaatatttgtggatggaggtagtagcgtgtaagtggagataggctgcccatgcagataaccacaaaattgcatcatgttgtcaagtgactgcttggtaatttccttttgatgcttatattaaattaccgctggatacttttaagtcagatacatatatatgcaaataatattataagaatcatacagaaaaataaaaccatggaccttagcttagagttgtctgcactctgttatttgtaactgatgaacatatgcttttctgtaggtatttgctaatgagagaggttctaatccttctaaaccgactagcttcgcatgctaatttttcaaagccaacactggaagtgctcacaagcagcaagctctgtgcaaccttgacaattgatgtcgcaaatcagttgccgcaaaggagcaaatacccattgagacaccttggtgagatcaacatccagatggcgaacgatctcgctgaactagcccagaagttccgcacgcgagtacacagtttcttggaagagcaacattcaacagttgatcattccaatccaagtgctttgcacgagagttgacagcttccaggatgtgcaaaatcccgacggctaactgttctgcccccaattagctgggtgcaaataacagctaaagcagctagggggactatttctcgagctagcggagaaattttgtaatccctgtattatttctcccttttggatatttttgtactaataggtagggcctttcctttcctgggtttgtttggcttggctggggcgagtaaataggttttacctggtggtgtacatagaggctgatgctttctcgccattttggggctatgtaattctacgcaaagagaaggaaatgtacaatcagataaccgcataggctgttgcagcttttggtttgaatcgaactgataatcatatcctcattttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0128300, RefSeq:Os02g0128300