Os02g0129000

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Revision as of 02:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0129000| Description = Conserved hypothetical protein| Version = NM_001052309.1 GI:115443988 GeneID:4328180| Length = 4292 bp| Definition ...")
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Gene Name

Os02g0129000

Description

Conserved hypothetical protein

Version

NM_001052309.1 GI:115443988 GeneID:4328180

Length

4292 bp

Definition

Oryza sativa Japonica Group Os02g0129000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1507314..1511605

Sequence Coding Region

1507314..1507566,1507645..1507913,1508010..1508213,1508323..1508415,1508509..1508604
,1508688..1509032,1509123..1509191,1509284..1509367,1509455..1509520
,1509735..1509800,1509934..1509999,1510097..1510162,1510280..1510327
,1510406..1510468,1510554..1510619,1510782..1510841,1511185..1511232
,1511315..1511605

Expression

GEO Profiles:Os02g0129000

Genome Context

<gbrowseImage1> name=NC_008395:1507314..1511605 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1507314..1511605 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaatatttgtcagaggaacagactgaagaagaaaatacccttccacagcttgccacaccatctgaacaaaaaactgtatgtgatgattctggagaaggcaatgaagacactgatgacgattttgatatcaatgatggagaaggcaatgaagacactaatgacgatgttgatattgatgatgaaggcaatgaagatactgatgttgatattaatgttcgaggcaactgctaagtttaatagtcctaatgttgaaaatggagcacctgaaacacgtggcaagacaaaactgaaagatgtttggaaccttccgaaagggcttagaattgtggtacaatgcaatgatctcaatcaggcggtaggggaagaagctggagttttgggtaaatttcttggaatgatagctaggaatggtagtctgtgtagcttaggctacacagactggagatatgtaataggaaagagagagaaaaatacaaatgaactaaaagttaaaaaggacatacttaagcaagtaaagatgagattcctttatgctcctcggatggaagagttcatattaaaaaaaattggagaaagatggcggcaatataaagcaaaactaaaagatttgtattttgatgtgaatgagactaaggaagctaattgcaacaatgtcccagaaggtgtgctttctgaccagtggattgctcttgtcaatcattggatgaacgagaaatcgaagagaataagtgagcagaataagaaaaactgccaaaagaagaaggcaattcacacagcagggacaaagagttttgctcgcacaagagaagagatgagacaaaaagatcctgcaaagaagtacccacatagagctgttgtttatgtccacacacacaagcgcaaaagtgacaagaatataaatgggcatgtggataatttgaagagacttatagctgaacaaccagctttagcggatgctagtaaaggaaagactgcttggaaaggagatgcattgaaccaaatactaggagatgacaagcctgggcgtgtgcatggtcttggactagttccaaagcctaaacaagtgcttgatgtgccaacttcccgacgtttgcagaatataaatcttactacagtggaggataactccagtgaagatgtaatggctattagactgcagatggaaaagttagaacgccatgttgagaataatgatgctgaacttttacaattaaaagagaaggcaaccaagttggaaaaggcacaaaagaatcagggaggtttagatggagcatctacaaataaaaaagctatttgtgatgacgtacctaattcaaaaaggaggagagtgtatggtgacaacccctcgcaagaaatttgtatgtttgaggagggaaacattatggatcagcaggacaacagtttgatgaatacacaaagccatgtgcacgatgagaatttgcaaccaccaaccaagcattctactgtttacaagcgcaaaggaaatttggaccagaatgagcttatgcaaccagggaagagtatttctagtgcatacaagaacaataaacctgacaaccaggacaactatatggtgaatgcacacaaagttacaagtacacacaagaacaaagagaaccttacccgcaagcttgttagaccaagcctaaacaagtatagtactgcttctaagaaacggcaatgcaacacaatggactttttaactgacaattcaacagtgaaagtgtatggtgacggtcccttgcaagaaatttgtcatgttgaacaggaaaacattgtgatgaattcacaaagccatgctcaagatgaggataagacaccaccaaccaagcatgctactgcacacaagaacaaacgaacctttggcctaaatgaccatgggaaacagatggagattatttgtgccaaggaacaacagtgcagcaaaatggactttatcactgacaattcaatggaggttggaactaaagtattcttaaaaagttggaaaaatcggaatacaaacgtggctcttgccactattgtaagctgtgatccaacacgcagagttggaggtgttgagctaggaaatgaatttttaatggttcatgtcgatcttgcattggcaaaatccgaagatttgattaggccatacaaaggctacaaaattgttggtcatgttgtaggacttgaaattgcgtggcctgcaatttttatatgttcctatctcttacttcttacttcggagatgtgcttttcgtcttcataa</cdnaseq>

Protein Sequence

<aaseq>MRNICQRNRLKKKIPFHSLPHHLNKKLYVMILEKAMKTLMTILI SMMEKAMKTLMTMLILMMKAMKILMLILMFEATAKFNSPNVENGAPETRGKTKLKDVW NLPKGLRIVVQCNDLNQAVGEEAGVLGKFLGMIARNGSLCSLGYTDWRYVIGKREKNT NELKVKKDILKQVKMRFLYAPRMEEFILKKIGERWRQYKAKLKDLYFDVNETKEANCN NVPEGVLSDQWIALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQK DPAKKYPHRAVVYVHTHKRKSDKNINGHVDNLKRLIAEQPALADASKGKTAWKGDALN QILGDDKPGRVHGLGLVPKPKQVLDVPTSRRLQNINLTTVEDNSSEDVMAIRLQMEKL ERHVENNDAELLQLKEKATKLEKAQKNQGGLDGASTNKKAICDDVPNSKRRRVYGDNP SQEICMFEEGNIMDQQDNSLMNTQSHVHDENLQPPTKHSTVYKRKGNLDQNELMQPGK SISSAYKNNKPDNQDNYMVNAHKVTSTHKNKENLTRKLVRPSLNKYSTASKKRQCNTM DFLTDNSTVKVYGDGPLQEICHVEQENIVMNSQSHAQDEDKTPPTKHATAHKNKRTFG LNDHGKQMEIICAKEQQCSKMDFITDNSMEVGTKVFLKSWKNRNTNVALATIVSCDPT RRVGGVELGNEFLMVHVDLALAKSEDLIRPYKGYKIVGHVVGLEIAWPAIFICSYLLL LTSEMCFSSS</aaseq>

Gene Sequence

<dnaseqindica>1..253#332..600#697..900#1010..1102#1196..1291#1375..1719#1810..1878#1971..2054#2142..2207#2422..2487#2621..2686#2784..2849#2967..3014#3093..3155#3241..3306#3469..3528#3872..3919#4002..4292#atgaggaatatttgtcagaggaacagactgaagaagaaaatacccttccacagcttgccacaccatctgaacaaaaaactgtatgtgatgattctggagaaggcaatgaagacactgatgacgattttgatatcaatgatggagaaggcaatgaagacactaatgacgatgttgatattgatgatgaaggcaatgaagatactgatgttgatattaatgttcgaggcaactgctaagtttaatagtcctaatggtaagaaataatgacattattactcgtatccctgattactaaggatcacttttgtcttcgcaatttaacaccgaacagttgaaaatggagcacctgaaacacgtggcaagacaaaactgaaagatgtttggaaccttccgaaagggcttagaattgtggtacaatgcaatgatctcaatcaggcggtaggggaagaagctggagttttgggtaaatttcttggaatgatagctaggaatggtagtctgtgtagcttaggctacacagactggagatatgtaataggaaagagagagaaaaatacaaatgaactaaaagttaaaaaggacatacttaagcaagtaaaggtaattccttttcagatcaacatttttgctaacttcttgtattatgttatgcatatccccatatggccatatgagtttctgtgttgctatatgtagatgagattcctttatgctcctcggatggaagagttcatattaaaaaaaattggagaaagatggcggcaatataaagcaaaactaaaagatttgtattttgatgtgaatgagactaaggaagctaattgcaacaatgtcccagaaggtgtgctttctgaccagtggattgctcttgtcaatcattggatgaacgagaaatcgaaggtacatataccatattcatttctgtaatggtcttacaaattagaactctgtactaaacaaaacaatgcaatattcttttttgattgctaactctacgagaccataacagagaataagtgagcagaataagaaaaactgccaaaagaagaaggcaattcacacagcagggacaaagagttttgctcgcacaagagaagagatggtaaaacatgtcttgaatagtattcatctatttccatttcaagcatgtatagctactattaggactttactgatttggtcatgtgttccatagagacaaaaagatcctgcaaagaagtacccacatagagctgttgtttatgtccacacacacaagcgcaaaagtgacaagaatataaatgggcatgtggtatactattaacactcaaccatagatatttttcagttattctcatatgttgttttattcgtattaatttttcatatgtttaggataatttgaagagacttatagctgaacaaccagctttagcggatgctagtaaaggaaagactgcttggaaaggagatgcattgaaccaaatactaggagatgacaagcctgggcgtgtgcatggtcttggactagttccaaagcctaaacaagtgcttgatgtgccaacttcccgacgtttgcagaatataaatcttactacagtggaggataactccagtgaagatgtaatggctattagactgcagatggaaaagttagaacgccatgttgagaataatgatgctgaacttttacaattaaaagagaaggcaaccaagttggaaaaggcacaaaagaatcaggtgaatttaagggagttgagtcttaaaaaaattatatgaacttgtgtgtgacccaatgaatgcatctaacttacctaattgaagttacagggaggtttagatggagcatctacaaataaaaaagctatttgtgatgacgtacctaattcaaaaaggagggtatgtatctttatggaagaaatatcataacattttctgcattatctcataaactgtggtatagatctctgttcattttctgttatggacagagagtgtatggtgacaacccctcgcaagaaatttgtatgtttgaggagggaaacattatggatcagcaggacaacagtttgatggtaatgtgatatagcaccatcttataactgggaatagctgtgtttttttacttgggaatagcatttattttctctcttttacaatagaatacacaaagccatgtgcacgatgagaatttgcaaccaccaaccaagcattctactgtttacaaggtccttgcctttgcatttaaaatattattatatatatattcactattatttacatagcattcattataatcatatgccttcttttactctagaatacacagtctttgggccagaatcacagtgggaagcaaaggaagattacttcctgtgcaaacataaacaaataattggaacattatagtttgtgccaattttatgacctattccattgcagcgcaaaggaaatttggaccagaatgagcttatgcaaccagggaagagtatttctagtgcatacaaggtgagttgattaagttctctctttatcctttcaaactcaatgccatagtcaataagtgtttgaaagtagtttaatttcgatatataaatgtatatatagatttgtaaaatttatttgttaccttccactgtagaacaataaacctgacaaccaggacaactatatggtgaatgcacacaaagttacaagtacacacaaggttattttttcatcactttaagtcaccatgtctacagatataagctctttgaaactataacacacatgatttactagttataataattgtattgcagaacaaagagaaccttacccgcaagcttgttagaccaagcctaaacaagtatagtactgcttctaaggttagtctaattgtttcaagttcaaaatgctatttctgtttattgaacactacacaacaactaaaatagcacacacagcatgttggtttttactgtaaattctctctattttttcagaaacggcaatgcaacacaatggactttttaactgacaattcaacagtggtaaaccttgctaacattttagtctaaatagtttaataaaatctggtcttaatgtccttttattttccactgtgatagaaagtgtatggtgacggtcccttgcaagaaatttgtcatgttgaacaggaaaacattgtgatggtaatatacataaatttcattgttttatacatgggaatagttgcactattttgtaactgggaatatatgctctctttgacaacagaattcacaaagccatgctcaagatgaggataagacaccaccaaccaagcatgctactgcacacaaggtccttgtctttcaatttatatttttattctgaactcaccatggttgcatcctattatatggttatcatggatacatagcattatattatttggtattgtttgtaactaactatgaatgtttactatagttcatgacaatgtgatgtattcttttattctagaacaaacgaacctttggcctaaatgaccatgggaaacagatggagattatttgtgccaaggttagttttcacttcttattgagttcaaaaattatttgatagaaaagtttgaaagtaaaatttcttaatatatataattttagcactaatttgttgccctcccctatagaacaagaaacctgacaatcaggacagccatatggtacatgcacataaagttggtggtgcatacaaggttgtttttttattcaccatgtttacaaatatcagtccattcaaactataacatgcatgattcactagtattatgattgaattggagaacaataattagctctgtttggtctttctttctttctatcttgtggttaaattgcaaaccatgatccaattttttttataggaacaacagtgcagcaaaatggactttatcactgacaattcaatggaggtattttactgtgaaattatttatgatacttgaatttcttaaagtatattgataatattgatggatgtattatgcacttcaggttggaactaaagtattcttaaaaagttggaaaaatcggaatacaaacgtggctcttgccactattgtaagctgtgatccaacacgcagagttggaggtgttgagctaggaaatgaatttttaatggttcatgtcgatcttgcattggcaaaatccgaagatttgattaggccatacaaaggctacaaaattgttggtcatgttgtaggacttgaaattgcgtggcctgcaatttttatatgttcctatctcttacttcttacttcggagatgtgcttttcgtcttcataa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0129000, RefSeq:Os02g0129000