Os02g0130600

From RiceWiki
Revision as of 02:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0130600| Description = Conserved hypothetical protein| Version = NM_001052320.1 GI:115444010 GeneID:4328191| Length = 4279 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0130600

Description

Conserved hypothetical protein

Version

NM_001052320.1 GI:115444010 GeneID:4328191

Length

4279 bp

Definition

Oryza sativa Japonica Group Os02g0130600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1595033..1599311

Sequence Coding Region

1595056..1595498,1596621..1596654,1596791..1596979,1597956..1598045,1598136..1598201
,1598299..1598390,1598501..1598548,1598680..1598806

Expression

GEO Profiles:Os02g0130600

Genome Context

<gbrowseImage1> name=NC_008395:1595033..1599311 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1595033..1599311 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttccacggctcgccggcggcggtggcggcgtcggcggcggtggcggagatgaggttcacgacgggggggtcgtcgacgcggtcgtgggagccgacggtgacggcggacacgtcggacctgcactactggatgcagtggcgcgccgcggtgtgcgcgctgtccgtgctcgcgtgcatggccgtcgcggcgtgcctcgtgtggcgccacgagggccccggcgccgaacgccgccccggcggcgcgtccggcggcggcggcgggagcaaggagcggcggcggccgggggtgctgtacgacgacgaggcgtggcggccatgcctccgggacatccacccggcgtggctgctcggctacaggctcatctccttcttcgtcctcctcagcttgctcatcgtcattgtcatctccgatggtggcaccatcttctactactacactcagtggaccttcattctggtgacgatttacttcgggctcggcacggcgttgtccatctatggatgcagcaagcttgctgatgagaatgttgtcactgaaagaacagacatggagctcggctcgtacgtcgcccatggagctggtactaaacccaatttgaatggggaagatgacacaggagagattgctggattctggggttacctgctccagatcatctaccagacaaatgcaggcgcagtgatgcttacagattgtgtgttttggttcatcatcttcccattccttacagtcaaagattacaatctaaattttttgttgataggaatgcactcggtaaatgccgttttcttgcttggtgaagctgccctgaatagcttgagcttcccttggttccgggtcgcatatttctttctctggactgctctctatgtcatttttcaatggattctccatgcatcaactccactttggtggccatacccatttctcgatgtttcagctaatttatctcctttgtggtacttcgccgtcgcgatcatgcaattaccatgctacgcggtattcagactggtgatcaaactgaaacaccacctgctcacaaggtggtttccgggttcagtcgtaagaggctcatctacaccataa</cdnaseq>

Protein Sequence

<aaseq>MFHGSPAAVAASAAVAEMRFTTGGSSTRSWEPTVTADTSDLHYW MQWRAAVCALSVLACMAVAACLVWRHEGPGAERRPGGASGGGGGSKERRRPGVLYDDE AWRPCLRDIHPAWLLGYRLISFFVLLSLLIVIVISDGGTIFYYYTQWTFILVTIYFGL GTALSIYGCSKLADENVVTERTDMELGSYVAHGAGTKPNLNGEDDTGEIAGFWGYLLQ IIYQTNAGAVMLTDCVFWFIIFPFLTVKDYNLNFLLIGMHSVNAVFLLGEAALNSLSF PWFRVAYFFLWTALYVIFQWILHASTPLWWPYPFLDVSANLSPLWYFAVAIMQLPCYA VFRLVIKLKHHLLTRWFPGSVVRGSSTP</aaseq>

Gene Sequence

<dnaseqindica>24..466#1589..1622#1759..1947#2924..3013#3104..3169#3267..3358#3469..3516#3648..3774#ggcctcgatcggtggtcgaacacatgttccacggctcgccggcggcggtggcggcgtcggcggcggtggcggagatgaggttcacgacgggggggtcgtcgacgcggtcgtgggagccgacggtgacggcggacacgtcggacctgcactactggatgcagtggcgcgccgcggtgtgcgcgctgtccgtgctcgcgtgcatggccgtcgcggcgtgcctcgtgtggcgccacgagggccccggcgccgaacgccgccccggcggcgcgtccggcggcggcggcgggagcaaggagcggcggcggccgggggtgctgtacgacgacgaggcgtggcggccatgcctccgggacatccacccggcgtggctgctcggctacaggctcatctccttcttcgtcctcctcagcttgctcatcgtcattgtcatctccgatggtggcaccatcttctactactacactcagtaagccactccatttcattttctcagctactactttttttttacctcttcattaattatctgttcctttcccccaaaaaaaacatgtcattttaacttggaactttggaagatggtgttcttgatgcaaagtttaacttcctccttatctgttttcccccatataacttggatggtgttcaggatgcaaagtttggtgataagattttttttaaaagaaaaaaaaaagcaaggaaatgagattgattaaaattttcattgtgtgctcaagtgcttcaactaggaggaatgtactgtggtcaagaagtttggcatttgttcccctttggtgtaatttagatttttcagggaataaagggtgcttttccatgaagcaattggttttctgaacatgcatataaagaattaatgaaaactgtcaggcagaattcctggcattttctgttaaaaatactatgcacaattgatggctaaaaacggtttgcctgttagcttagacagcaagcgacgcgcctcaccattttggttctattgttcatggtcatgggtagtaccaagatttgtactagcacatctctgaaactgtttttatatgtgacacattacctcaatttaataattacaaaggacctcacatgttatttggagcgcatttaaaaatgcagtcttttgtgcagtatggaatacagtgtcataactgttcatactcagtttattaactaccagtctaccagctagaagtactgaaattcggcattactacctgtatggtcagtagtttttattaatgtttttgattaatggaatggacaacactaggaatacccactccaacttagctacctggtcttacatgacttcctgttccattaaacatttctcacatcaagttaatcaaatactgccttttgataatatattataatatatgacctttttgttgcaaaattctggtgtttatcatatttctcaataaacaaactagtgtatctggttgcaagaatcaaattatcgttacatggatccgctagttgttggtgtttgtcaccctgctcccagaagtagcatttgtcaccagccttcctcctctaataagtggttgttgaactgtcgataatgcaggtggaccttcattctggtgacgatttacttcggggtaggtcccttaatccctcctttttcacaacaaaatagtttgtctctgcactgaattcatgaatctaatgattcatgtcgatttatctttacatcgaacacatctgaagaaaagtttgttttgtggaattgttcagctcggcacggcgttgtccatctatggatgcagcaagcttgctgatgagaatgttgtcactgaaagaacagacatggagctcggctcgtacgtcgcccatggagctggtactaaacccaatttgaatggggaagatgacacaggagagattgctggattctggggttacctgctccagatcatctaccaggtaaagagggattccatgcagccaaagaacttagaataaccatccacttgagcgcctttttttttcttatttgttattgaagagagttatcttatctgcactgacatttgcgtccatggagagggggtctgatctcattaggcttttcatacgcaattattgcactaacaactaaagtacgtttgtggtgtgctctgatgaattggattccgtttctaaagatcagatgtgcccacatactagcatctttgtccggtcacatttcaagggctctcacgtagccgccctacatgagccatcttgacatcttgttggtcctatctaaatattcagataatctctgcaaatctcacatttccttgtacctcaagggctgaatcagctttaaaccgctttgcgaaatgtagggctgactctttttagtagtggcatcaagaataaagacaacatgtttcctttgtgttgatttgcaaggcctaactgtacccaaacggtgactgaataccttcctaggctgaaataggacagaatggaactattgttctgctttgtgataagaattactagatagttctatggatggtagtttactagcgccatgtttagttccaaagttattcttcaaactttcaactttttcatcgcatcaaaactttcctacacacacaaacttccaacttttccgtcacatcatttcaatttcaaccaaacttccaattttggtgtgaactaaacacaacctagatctgtgttgggttactgtgtacactttgccaacaaaattttgtaatatatctcaccttttttagagaaaagaatgggtatattcattaattcataatcgttgtgaatatccttttaaggatttatgctcttattatcaaactttacagaaaactgagtaatttatgtaagttttacagtttactagcaatttttactgaaccagtatctgaccttttatctgccatgacagacaaatgcaggcgcagtgatgcttacagattgtgtgttttggttcatcatcttcccattccttacagtcaaagattacaatctaaattttgtaagtattacatgcttcaggccttccctacctgccatctcatactttgaccaatacagtgctaaaaattcagttactatgtttcgacagttgttgataggaatgcactcggtaaatgccgttttcttgcttggtgaagctgccctgaatagcttggtaagttgataactacttatctcgatcagtcaagtaattttatgaatgaatgaatggttaatttgacaattacccactgaattcaacatatctgcagagcttcccttggttccgggtcgcatatttctttctctggactgctctctatgtcatttttcaatggattctccatgcatcaactccactttggtaactttttttttctaactcccattctctcctaactactaaaaccatgactaagagtagtacttgcatctttctgttactgatcactacatttcatatctatttgtcaggtggccatacccatttctcgatgtttcagctaatttatctcctttgtggtaattccattacctccctacaatgatacttcctcccatatgtcttctcttgcaaagattacaaactgaaatcatcatgaatatcacaactcaaatcatcagattttcaatgaatcttttcatctacacaggtacttcgccgtcgcgatcatgcaattaccatgctacgcggtattcagactggtgatcaaactgaaacaccacctgctcacaaggtggtttccgggttcagtcgtaagaggctcatctacaccataagccaggccgtcatgcatcatcttcctccgccattgccaacagtttatacagaaagggcaatggtgaagatcacaagaaaagaataatggcagcctggtggtgatggactgatggtggcatcgatcaccgactccatttccattcctcctttgcgagattctcttattgcagcaggtgcaactctccgagcgaaaaaagaaaacaggagaggcacatgcgttttacaccaccgtatagtagttctgatagatgtaaattgaagcttacaggttcagatatgagattcagagagtttttctttttctttttggatgtaatggaaactgaaatgaacagagagaaaaaaaagagtgtggtggggttatgtatagcttgactcattgactgattggtcaaatggaggagatatttgttaacattttttttattttgtagagctgattaattaatggtcatttgtatatgtgattaatgctaatgagtaatgaatggatgcaagtgtgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0130600, RefSeq:Os02g0130600