Os02g0133200

From RiceWiki
Revision as of 02:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0133200| Description = Similar to Phosphatidylinositol transfer-like protein IV| Version = NM_001052337.1 GI:115444044 GeneID:4328209| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0133200

Description

Similar to Phosphatidylinositol transfer-like protein IV

Version

NM_001052337.1 GI:115444044 GeneID:4328209

Length

4664 bp

Definition

Oryza sativa Japonica Group Os02g0133200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1748459..1753122

Sequence Coding Region

1748795..1748815,1748943..1749017,1749453..1749868,1750095..1750215,1750423..1750533
,1750636..1750737,1750896..1750989,1751145..1751194,1751323..1751424
,1751794..1751871,1752322..1753050

Expression

GEO Profiles:Os02g0133200

Genome Context

<gbrowseImage1> name=NC_008395:1748459..1753122 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1748459..1753122 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcagccgccgtgatgccgacgccgagcatgaactcctcatccgccggcgcagcggccgcggcggcggcggcagagggaggtggcggcgaggacgagcggcgggcgcgggcgctgtcgtcgtcgtcgtcgtcgctgcggcagcgcgcgatgagcgcgtcgtcgaagctgctccggacgtcgctgagcaggagcagcaagggggcggcggcgcggcagcggagcagcaaggtgatgtcggtgtcgatcgaggacgtgcgcgacgcggaggagatgaagtcggtggacgcgttccggcagacgctggtgctggaggagctcctcccggcgcgccacgacgactaccacatgatgctccgcttcctccgcgcccgcaagttcgacatcgacaagagcaagcagatgtggagcgacatgctgcaatggcgcaaggagttcggatctgacaccatcctcgacgacttccagttcgaggagatggaccaggtgctcgagcactacccgcagggccaccatggcgtcgaccgcgacggccgccccgtctacatcgagaagctcggcgcgatcgacaccgccaagctcctccaggtcaccagcatggaccgctacgtcaagtaccatgtccgcgagttcgagcgcgccttcgccgtcaagttccccgcctgctccatcgccgccaagcgccatgtcgaccagagcaccaccatcctcgacgtctccggcgttgggtacaagaacttcaacaaggccgccagggatctcatcggccgcctccagaaggtcgatggtgacaactacccagagactctgtgccggatgttcatcatcaacgccggtcaaggattcaggcttctctggaacaccgtcaagtccttcctcgatcccaagaccacagccaagatccatgtcctaggcaacaagtaccagagcaagctgctggaagtgattgatcccagcgaattgcctgagttccttggtggcacttgcacctgcgaaggcggctgcatgcgctccgacaaagggccatggaaagatcctgaaatcataaagatggtccaatgtggcatgggaagatgtggatttaatagctcgggtcatactgaggctgatgagaagatgatcactgaggatgacatagtggcaattcccaagaagcaagaatcaattcgccgtgattccgttgattcacccaagatcccacgcgaaaagattgaacatccgcagatgtcaccactccatgagatgtcaacttcagaaagcaaggctcctcctggccaagagggaagctcttcccgatacgacgatctgttccccatgccggacaagaacatggacttcaactggaacggcgaagtcagcgccgagaagctcgcactcgcacgagacatgtacgcgtcgctgccggacgcgtacaagcacggcgacgccggggaccggcaggtggtgacggggttcatggcgttcgtgatgggggtggtggcgatgttccgggtggggaagatcgcgccgaagcgcgccatggacgcggcgatgggcatcgcgacgatggaggcgatggccaagaaccggaagctgatgcagcagcagcagcggcagctggagcagctccctggcccggacacggtgacggtgtcgacggcgcagtacgaagcgctgatcaagcggctcggcgacctcgaggagaaggtggcggcgctcacctcccgccctcccgagatgcccgccgacaaggaggacttgctcaaagccgccgtcacccgcgtcgaggccctcgagaccgagctcgaatccaccaagaagcttttggagacttcgtcggggcagcaggaggaggtgctggcctacatcgagaagaagaagaagaagagggggatgcagaatccattccgctggtga</cdnaseq>

Protein Sequence

<aaseq>MSSAAVMPTPSMNSSSAGAAAAAAAAEGGGGEDERRARALSSSS SSLRQRAMSASSKLLRTSLSRSSKGAAARQRSSKVMSVSIEDVRDAEEMKSVDAFRQT LVLEELLPARHDDYHMMLRFLRARKFDIDKSKQMWSDMLQWRKEFGSDTILDDFQFEE MDQVLEHYPQGHHGVDRDGRPVYIEKLGAIDTAKLLQVTSMDRYVKYHVREFERAFAV KFPACSIAAKRHVDQSTTILDVSGVGYKNFNKAARDLIGRLQKVDGDNYPETLCRMFI INAGQGFRLLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEVIDPSELPEFLGGTCTCEG GCMRSDKGPWKDPEIIKMVQCGMGRCGFNSSGHTEADEKMITEDDIVAIPKKQESIRR DSVDSPKIPREKIEHPQMSPLHEMSTSESKAPPGQEGSSSRYDDLFPMPDKNMDFNWN GEVSAEKLALARDMYASLPDAYKHGDAGDRQVVTGFMAFVMGVVAMFRVGKIAPKRAM DAAMGIATMEAMAKNRKLMQQQQRQLEQLPGPDTVTVSTAQYEALIKRLGDLEEKVAA LTSRPPEMPADKEDLLKAAVTRVEALETELESTKKLLETSSGQQEEVLAYIEKKKKKR GMQNPFRW</aaseq>

Gene Sequence

<dnaseqindica>4308..4328#4106..4180#3255..3670#2908..3028#2590..2700#2386..2487#2134..2227#1929..1978#1699..1800#1252..1329#73..801#aggaggccctcgggctcggcgcggcgaataatttaggaaattgattattaataaggcgagcggcgagcggcgatgtcgtcagccgccgtgatgccgacgccgagcatgaactcctcatccgccggcgcagcggccgcggcggcggcggcagagggaggtggcggcgaggacgagcggcgggcgcgggcgctgtcgtcgtcgtcgtcgtcgctgcggcagcgcgcgatgagcgcgtcgtcgaagctgctccggacgtcgctgagcaggagcagcaagggggcggcggcgcggcagcggagcagcaaggtgatgtcggtgtcgatcgaggacgtgcgcgacgcggaggagatgaagtcggtggacgcgttccggcagacgctggtgctggaggagctcctcccggcgcgccacgacgactaccacatgatgctccgcttcctccgcgcccgcaagttcgacatcgacaagagcaagcagatgtggagcgacatgctgcaatggcgcaaggagttcggatctgacaccatcctcgacgacttccagttcgaggagatggaccaggtgctcgagcactacccgcagggccaccatggcgtcgaccgcgacggccgccccgtctacatcgagaagctcggcgcgatcgacaccgccaagctcctccaggtcaccagcatggaccgctacgtcaagtaccatgtccgcgagttcgagcgcgccttcgccgtcaagttccccgcctgctccatcgccgccaagcgccatgtcgaccagagcaccaccatcctcgacgtctccggcgttgtatgcctcctcctcctcctcctcctcctcttctttcttcttcttcttgccttcttcttggacgtggattttcatccctcgaggggatatcatcttgttatttacataacatctaaatagttatcaaaaagtttgaaaaaaaataataacatagattaatatgaaatatatcacttcacaaacatgcaagatcaaattcgacttctacaagttgcaacaaaaagaacaaattaaagtgaaaatagttatcgtgcattcgcgtatatatttgttatttttgttacaatttgtagaagttgaattttgacttgcatgtttgtgaggtaatttatttcatattaatctaacttatgactaacatgcacgaaacaagtagatatctcattgagtgatgatttcactttccccttcttcacatccattaatattaattgtgattggttgatataggggtacaagaacttcaacaaggccgccagggatctcatcggccgcctccagaaggtcgatggtgacaactacccagaggtagctagcagaaattggctctctctgaatctgaatgttcactctttggttgtttttaattggtagtatctgaatctgaatgaccacatttgattttaattggtctgaatatgttcagtctttgattggttaattggtgcctgaatatctgaatgttcagtattagatttggttaactgatgttttttttaatccgaacgtttgttctttgattggttattgatgtatttttaatccgaatgtgtgctctttgatcggttaattgatgtctgaatgaatctaaatgtggacattttggtttgttcatcgatgtttatgattccaaatgttcgttcactcgttgatctgttgctgtctgtattgatgcagactctgtgccggatgttcatcatcaacgccggtcaaggattcaggcttctctggaacaccgtcaagtccttcctcgatcccaagaccacagccaagatccatgtaatccaatccatccacaatcttttcgatgtcaatgtcacatcgatcattcgtaattaagctacatttgatcaatttgcaactaaacattacataatgtttgcatttatgtgccctgttttaaccaggtcctaggcaacaagtaccagagcaagctgctggaagtgattgatcccaggtctgagcatgaaccttctagagttgttcgttcctgcttctatgcaaatgcaaatggaatcaccttgaatatttatattaaatctgctaatatcattattaaaaagaacaagattgagcagcgtgttgagctcactccctgttatttcgagacagcgaattgcctgagttccttggtggcacttgcacctgcgaaggcggctgcatgcgctccgacaaagggccatggaaagatcctgaaatcataaaggttatctgaaaattatagtgcatatatgcatcttacatgtgctagctaagtagctagtggagatttgccatgaactgaactgctcagccctagtgctgtctatatatgaagttatgaacatttctgatttggttctgatgcttcatctgatttttcagatggtccaatgtggcatgggaagatgtggatttaatagctcgggtcatactgaggctgatgagaagatgatcactgaggatgacatagtggcaattcccaaggtatcgttagttttgctaattgctatcattaagttttttttatgctcgtttttgtgcatcgtaacatttctgaatcatttttttgtgtgttttgatatgcagaagcaagaatcaattcgccgtgattccgttgattcacccaagatcccacgcgaaaagattgaacatccgcagatgtcaccactccatgagatgtcaacttcagaaagcaaggtaaatagacacgagtttatgattgcagactttgttcataattcacatgccacaatttaatcatccaaaattcaaaaatttgctggtgaattttacttctgttttcaatcatggtatcccagtgcaaacaaccaatctgcaacttggttagcctaatgtggcatctccctttctgatgaactgacagagaaagaaaattaactgcaggctcctcctggccaagagggaagctcttcccgatacgacgatctgttccccatgccggacaagaacatggacttcaactggaacggcgaagtcagcgccgagaagctcgcactcgcacgaggttgaaatttttattgcaatttcagtttcaaattgtgtgtgtgtgttacaaatgtcactgatataaaacgcgaatattatgaaggacctaatatcaaataaatagaagaggtgagccttcgaacccagaccggtcaggctaaccgaccaccttgtgaagctaaccggaatatccctagacgtctctccaaatgtcactgacataattgatggtggatgcaatgcagacatgtacgcgtcgctgccggacgcgtacaagcacggcgacgccggggaccggcaggtggtgacggggttcatggcgttcgtgatgggggtggtggcgatgttccgggtggggaagatcgcgccgaagcgcgccatggacgcggcgatgggcatcgcgacgatggaggcgatggccaagaaccggaagctgatgcagcagcagcagcggcagctggagcagctccctggcccggacacggtgacggtgtcgacggcgcagtacgaagcgctgatcaagcggctcggcgacctcgaggagaaggtggcggcgctcacctcccgccctcccgagatgcccgccgacaaggaggacttgctcaaagccgccgtcacccgcgtcgaggccctcgagaccgagctcgaatccaccaagaaggtaattaaacaaagagtaaattgtagtttgtgtcactttttattatcaatgtttcactttatatcatccttaaaccgattttttttttcagtttgtactcggtaaatttgctacttttcagtttaaaccacacaattctcttcactattcatacctaccctccgttctggtgaagatataatatacatatagatggagaagtttaatggtgtatcgagaccgatttgattgaggttgttgatggacgagtgtttgagaaattatatggggtggtccaaataaaaaaaaagatgatttaagggtagtttaaattgaaacttcaacaatatagataacctaaattgcaattgactaaaaataattacactcgccattgccgttgccatggccaagaagctaggtcgctgacaagtgagagtccatggttggttgcagcttttggagacttcgtcggggcagcaggaggaggtgctggcctacatcgagaagaagaagaagaagagggggatggtaaggggctcctgcttttcttttccgttggatgatcttcatcttattatataggcttgattacgttttggaagaactcattgactcgtttcatcatctgattccattaaagttttgccttcaacagcagaatccattccgctggtgatggacgggtttaaagcaagaagcggtgatggagctcggtcgtgcgtctcgtgtgttgttttgtgtgcgtcgtcgtcgctgtatctgaccccgtttgaaatgcggaaaaaattttgctatttctgcgggagttgagttgagttgtttcctccgggatttctgtgaaattcatgttacatacttcttgtgtttcaaaaggggccttatatgtgtatagcaaaaggaaaaaaaacaaactttttcttgcttactggactgaactgtgtaccccactgttgtgctgcacgtgctttatcaaacatattacatgtacaggctgtatatatctattttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0133200, RefSeq:Os02g0133200