Os02g0139300

From RiceWiki
Revision as of 02:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0139300| Description = Glycoside hydrolase, family 17 protein| Version = NM_001052379.1 GI:115444128 GeneID:4328252| Length = 3705 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0139300

Description

Glycoside hydrolase, family 17 protein

Version

NM_001052379.1 GI:115444128 GeneID:4328252

Length

3705 bp

Definition

Oryza sativa Japonica Group Os02g0139300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2097011..2100715

Sequence Coding Region

2097302..2097657,2099389..2100502

Expression

GEO Profiles:Os02g0139300

Genome Context

<gbrowseImage1> name=NC_008395:2097011..2100715 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2097011..2100715 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttcttcttggtggtggcatggaagggcggcggcggcggtggcgtgttgggtgtggctggcggcggcggcggcggtgggggtggaggcgataggggcgaactgggggacgcaggcgagccacccgctggcgccggacacggtggtgcagatgctcaaggacaacgggttcgacaaggtgaagctgttcgacgccggggaggacaccatgagcgccctgaggaagagcgggctggaggtgatggtcggcatccccaacgacatgctcgccgccatggccagcagcatggcggccgccaacaagtgggtcgaccagaacgtctccaactacctcaacgacggcgtcaagatcaggtatgttgctgttggtaacgagcctttcctggagacatacaatggaagctttctgcaaactacttttcctgccatcagaaacatacaaagtgcgcttgtgaaggctggcttgggtagtcaagttagagtgacatgccctctcaatgctgatgtttatcaatcatcgactagcaagccttctgatggggacttccgcacagatattcatgatctgatgctcaccatcgtaaaattcctgagcgatactggtggagctttcactgtcaacatctaccctttcataagcctctattctgattcaaacttccctgtcgactacgccttctttgatggtgccgcatcacccattgttgatggctctgcgacatacacaaacatgtttgatgcaaactatgacacacttatatgggctttgaagaagaatggctttggaaatctcccagtcattgttggggagattggatggccaactgacggggacatgaatgcaaatattcagatggcgcagcacttcaaccaaggcttcctaacacatattgccacagggcgaggaacgccgatgaggcctggaccagttgatgcttacttgttcagtctaatcgatgaggatgagaagagcatacagccaggtaattttgagcgtcactgggggatattcacctatgatggcttgccaaagtatcaactgaatcttgggcaatcacatggccttctcaaagcgaagaacgtgaagtaccttgagaggaagtggtgcgtgctgaagccttctataggccttactgatccaaggctttcagatagcatcagctatgcctgctccctggcagattgcaccagccttggttacaagacatcttgtgggggactggacaccagaagcaacatctcgtacgcgttcaacagctactaccagaagaacgatcaagacgatgtcgcctgtgggttctcgaacctcgcaacgatcactggccaagaccccagcaccggaacatgcagattcggtatcatgatcgaggttgactcggccttctcgtggaagctgcagcatgttagaagcagcaacctcttgatgcttctgctagtgcttctccagctttgcctgtcattctcatag</cdnaseq>

Protein Sequence

<aaseq>MGSSWWWHGRAAAAVACWVWLAAAAAVGVEAIGANWGTQASHPL APDTVVQMLKDNGFDKVKLFDAGEDTMSALRKSGLEVMVGIPNDMLAAMASSMAAANK WVDQNVSNYLNDGVKIRYVAVGNEPFLETYNGSFLQTTFPAIRNIQSALVKAGLGSQV RVTCPLNADVYQSSTSKPSDGDFRTDIHDLMLTIVKFLSDTGGAFTVNIYPFISLYSD SNFPVDYAFFDGAASPIVDGSATYTNMFDANYDTLIWALKKNGFGNLPVIVGEIGWPT DGDMNANIQMAQHFNQGFLTHIATGRGTPMRPGPVDAYLFSLIDEDEKSIQPGNFERH WGIFTYDGLPKYQLNLGQSHGLLKAKNVKYLERKWCVLKPSIGLTDPRLSDSISYACS LADCTSLGYKTSCGGLDTRSNISYAFNSYYQKNDQDDVACGFSNLATITGQDPSTGTC RFGIMIEVDSAFSWKLQHVRSSNLLMLLLVLLQLCLSFS</aaseq>

Gene Sequence

<dnaseqindica>292..647#2379..3492#gagtccttgcatttagctatcaaaggaaatctcctttcgtggtcaagctttaggtggagtttgatgagttcggctgggcttcatttattcccaaagatttgagctcttgatgctgctttaatagttcagagattccagcgtccttcacttcttgcagctcaggaaaggattcgatctttgagcttctagtgtttcttggagctttgctcttcgtgttcatcgatcccaaaatcccccttttttgctggtttctttagcttgcctgatcaatcatcccaagatctgagcagaatgggttcttcttggtggtggcatggaagggcggcggcggcggtggcgtgttgggtgtggctggcggcggcggcggcggtgggggtggaggcgataggggcgaactgggggacgcaggcgagccacccgctggcgccggacacggtggtgcagatgctcaaggacaacgggttcgacaaggtgaagctgttcgacgccggggaggacaccatgagcgccctgaggaagagcgggctggaggtgatggtcggcatccccaacgacatgctcgccgccatggccagcagcatggcggccgccaacaagtgggtcgaccagaacgtctccaactacctcaacgacggcgtcaagatcaggtctcactcactcactcactccctgaagattcttcagttcactctcaagcagtttttgctggggagctaatcagcttactctagtagttctagtttcatatggccttttaagcatactggttaagtctagaaagcatcaggtatagtatactcactcactcactcactgaagattcttcagttcactcactgaagattcttcagttcactctagtagctcttgtgtgattttgctttttaagcagtactggttaagtctagagcttttggtagagggttggcattacgttcaacctggttgttctagtgtgatatggccttttgagcatactggttaagtctagagtttttatgtagagtggttagcgttgcattcaatctgtgttgattggttcctaccaactgcagctcatatttggtagagtggttgagttagaaaccccctgtagtctatagcattgcatttttcgtggctcacgcgatttgcacccttgctgggatgagtcagttgagcatgtttgtctctggaggcaaaattaccacaaagtacagttgtgttttatccatctgtgcttgtactcctgattaatgcatacaccatgttgggagactttcttgctatcattatactgttagtaaagaattttgctcctctatggaattgtagcaagaatatgaggtttttgcactcaagtgacactatggtagtcatatcatttgggtgaagtttaccagttttttgttttgaatatgttcacaaacaactgcttctgggtagtactgttttttcaactgaaactgagctatcgatatgaccagtagcattcagtagtatgctatataaggtggaaggtatggacattgctgtgcggaggataacccttttttttgacatgtcctctttattcgttgaaagagaataataattgtccccactctgaattgctgcatgcccgcatctagaccttacataagctctttgttctgtcactatgctaatgcctcttctttcacttataggattttgtggatcactggatccccttatgtagatggcttataaaacctcccattccttttgcttgtcatgtctaattgtacacaagggaactgtgtttactaccaaaaagtatcacacacttatttgaagtatgagtggatctgttgcttttcatcattgcgaactgaacaagactagattttctaactaaacaatgctgtgttgtgtttgtgttggtaagaaattttcctacatgttattcacacatggagtatcccttattatacatatatcaaaacagcaactttataaatatatactaaactgctaagtaacatgacctggactaacattatagagcataacaactgaagttcactgaatactcatgctgacctctgtgtgtttgtatgaaacgcaaccatatcatttcttactagtgtgccacctccaagctggtggccaagtttggttaccactaatgagatgttgggtgtgtgcattagttccactctgactttcctggatttgaatcagtgacctatggtttggagcctcaatataattgaatcatccaattgttccgcactcttaagaaaagatgattgacaacacatcatataactcatgttctatatcccaccaactttatcctgcaagttcgttcctctgtgatgtttactcactgaaccatctgatctcacatcttggttttcctattgtaatatcaggtatgttgctgttggtaacgagcctttcctggagacatacaatggaagctttctgcaaactacttttcctgccatcagaaacatacaaagtgcgcttgtgaaggctggcttgggtagtcaagttagagtgacatgccctctcaatgctgatgtttatcaatcatcgactagcaagccttctgatggggacttccgcacagatattcatgatctgatgctcaccatcgtaaaattcctgagcgatactggtggagctttcactgtcaacatctaccctttcataagcctctattctgattcaaacttccctgtcgactacgccttctttgatggtgccgcatcacccattgttgatggctctgcgacatacacaaacatgtttgatgcaaactatgacacacttatatgggctttgaagaagaatggctttggaaatctcccagtcattgttggggagattggatggccaactgacggggacatgaatgcaaatattcagatggcgcagcacttcaaccaaggcttcctaacacatattgccacagggcgaggaacgccgatgaggcctggaccagttgatgcttacttgttcagtctaatcgatgaggatgagaagagcatacagccaggtaattttgagcgtcactgggggatattcacctatgatggcttgccaaagtatcaactgaatcttgggcaatcacatggccttctcaaagcgaagaacgtgaagtaccttgagaggaagtggtgcgtgctgaagccttctataggccttactgatccaaggctttcagatagcatcagctatgcctgctccctggcagattgcaccagccttggttacaagacatcttgtgggggactggacaccagaagcaacatctcgtacgcgttcaacagctactaccagaagaacgatcaagacgatgtcgcctgtgggttctcgaacctcgcaacgatcactggccaagaccccagcaccggaacatgcagattcggtatcatgatcgaggttgactcggccttctcgtggaagctgcagcatgttagaagcagcaacctcttgatgcttctgctagtgcttctccagctttgcctgtcattctcatagatgcttgtttcacaagagatatggctgtagtaagagcatcagccatctggcaggaggataaggatatttgatgtctgctgtcagtatgttcattcatgtaggaaccttttctttttttgctcttttttccctctttatttttccctggtggatgccgcgaacccgctatcgcgatcatgcttggattcttgttagtgtagcctttgatctacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0139300, RefSeq:Os02g0139300