Os02g0140200

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Revision as of 02:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0140200| Description = Similar to Beta-amyrin synthase| Version = NM_001052386.1 GI:115444142 GeneID:4328259| Length = 4843 bp| Definition...")
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Gene Name

Os02g0140200

Description

Similar to Beta-amyrin synthase

Version

NM_001052386.1 GI:115444142 GeneID:4328259

Length

4843 bp

Definition

Oryza sativa Japonica Group Os02g0140200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2148516..2153358

Sequence Coding Region

2148788..2148892,2149474..2149557,2149643..2149723,2150303..2150480,2150811..2150954
,2151048..2151094,2151353..2151409,2151566..2151664,2151867..2151989
,2152083..2152205,2152594..2152707,2152972..2153304

Expression

GEO Profiles:Os02g0140200

Genome Context

<gbrowseImage1> name=NC_008395:2148516..2153358 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2148516..2153358 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcggcgattctcgccgccggtggcggcggcggcggcggcagtggcgactcgccctccttccggcggcgccgttcctcctccatcccccctgtctctctctctcctctaactgttcgtcatgctctggattttggtggtggcaggaggatctggtctgcccgaggacgcggctgcagaacgcggtgtggagttggctgtacaagtgggtggagccggtgatgagcagctgggcgatgaacaagctgagggggagagctttggatgcactcatggagcacatccattacgaggacgagaacacgcagtacctctgcatttgctctgtcaacaaggctctaaacatggtctgctgctgggcggaagatccaaattcagacgcattcaagaggcatcttgcgagggtacctgatttcttgtggctttcagaagatggcatgaaggcgcaggtatatgatggttgccaaagctgggaaacagcattaataattcaagcgttttgtgccactgatcttgtaaatgagtatgcttcaactgttcagagagcccacgaattcatgaaaaattcccaggttgtaaggaatcatcctggtgaccaaagttactggcatcgccatagatcaaagggttcttggactctttcctctgcagacaatgggtgggctgtgtctgacactacagcagaagcactgaaggctgtattgttgctgacaaagatatctagtagcatggttggggatcccattgaaagagaaaggctgtatgatgctgttgattgcctcctatcttttgtgaacaaagatggtaccatttctacatatgaatgtaaaagaacttctacttggatagagattctcaagccttgcgagagttttccaaatatggtggttgattatccatatccagaatgtacctcctcagtgcttcaagctttggtgctgttcaaagaactatgccctggttaccgtactgaagagatagaagaatgtgttagaaacgcatcaatgtttattgagaacacgcaacgcaaagatggctcatggctaggcacttggggtgtatgcttcacctatggggccttcttttcagtacaaggattaattgctgctggaagaacatatgagaatagttcttccatcaggaaagcatgcgactttatattgtcaaaacagctcaatactggcggatggggagaaagccacgtttctaatgaaactaaggtctatgtaaacatcaaaggtgatcgtgctcatgtagtgaatactgcttgggcaatgctgactttaatttatgctggacagatggagcgagatccaaccccactgcattgtgctgcaaaagaattaatcaatatgcagttagaaacaggggagtttccccaacaagaacacgttggatgcttcaattgctccctcttcttcaattaccccaactaccgcaacatattccccatctgggctcttggagagtactgctggcatctccgctaa</cdnaseq>

Protein Sequence

<aaseq>GGDSRRRWRRRRRQWRLALLPAAPFLLHPPCLSLSSNCSSCSGF WWWQEDLVCPRTRLQNAVWSWLYKWVEPVMSSWAMNKLRGRALDALMEHIHYEDENTQ YLCICSVNKALNMVCCWAEDPNSDAFKRHLARVPDFLWLSEDGMKAQVYDGCQSWETA LIIQAFCATDLVNEYASTVQRAHEFMKNSQVVRNHPGDQSYWHRHRSKGSWTLSSADN GWAVSDTTAEALKAVLLLTKISSSMVGDPIERERLYDAVDCLLSFVNKDGTISTYECK RTSTWIEILKPCESFPNMVVDYPYPECTSSVLQALVLFKELCPGYRTEEIEECVRNAS MFIENTQRKDGSWLGTWGVCFTYGAFFSVQGLIAAGRTYENSSSIRKACDFILSKQLN TGGWGESHVSNETKVYVNIKGDRAHVVNTAWAMLTLIYAGQMERDPTPLHCAAKELIN MQLETGEFPQQEHVGCFNCSLFFNYPNYRNIFPIWALGEYCWHLR</aaseq>

Gene Sequence

<dnaseqindica>4467..4571#3802..3885#3636..3716#2879..3056#2405..2548#2265..2311#1950..2006#1695..1793#1370..1492#1154..1276#652..765#55..387#aattgggcctaacgtaattgtgcttctttttgggggaggcgtggcccgtcgtgaggcggcgattctcgccgccggtggcggcggcggcggcggcagtggcgactcgccctccttccggcggcgccgttcctcctccatcccccctgtctctctctctcctctaactgttcgtcatgctctggattttggtggtggcaggaggatctggtctgcccgaggacgcggctgcagaacgcggtgtggagttggctgtacaagtgggtggagccggtgatgagcagctgggcgatgaacaagctgagggggagagctttggatgcactcatggagcacatccattacgaggacgagaacacgcagtacctctgcatttgctctgtcaacaaggtagcttcaattttttttcccctttgtgatagtcatcgtcaattacagatgtttgatgttaagtgttaaatttgattcttactttgctcttcatttctagtaagagaaatgggggccatgggccctagttcaaaaaaaaaaagtgttaaatttgattccggggaggctaggatatgtcagatttgagctaggcatcagaattcaaacggtttgtgtgaagcggtatttgtcttcttattacttgttactttaaacaatattcaggctctaaacatggtctgctgctgggcggaagatccaaattcagacgcattcaagaggcatcttgcgagggtacctgatttcttgtggctttcagaagatggcatgaaggcgcaggtaactaaacttttgtgtctttcatgcataaattgacaaatttcatgtggaagtggggctaacatggttaatgtgtccacttccggtactaccctaagacaaatactttacatctaggaaagatttcctgttactatctagttctgtcattaatttaacagagaaacgaggttatacacctatggatggttgtactttcagtgatgttcatcgcatatttagggaatacatcagtagatatgttaaacatataccaagaaggtttccaacctacaacagctataaagctaaatttctaaagttgctgtgccttttgttctagaaagttagctattttatctcaggcaaagatatgaaaaactgtgataaattgttatctcgatgataggtatatgatggttgccaaagctgggaaacagcattaataattcaagcgttttgtgccactgatcttgtaaatgagtatgcttcaactgttcagagagcccacgaattcatgaaaaattcccaggttcagaatctatactttcattatctaaatttagaaaccaactgctgtataagactataagattcaacataaattgcataatctttcttgaaggttgtaaggaatcatcctggtgaccaaagttactggcatcgccatagatcaaagggttcttggactctttcctctgcagacaatgggtgggctgtgtctgacactacagcagaagcactgaaggtcattatgttctttgttcttttcctggttactaatgtaggcaaatgaggtataaaactagtgtcatattaatccagtcctaatcggtgacagcacatcgaagaagctcatgcatataaaaaatattggccttgatatattcccaattctgcataatttctattatgtctaccctagaaatcttacataatttcatttccaggctgtattgttgctgacaaagatatctagtagcatggttggggatcccattgaaagagaaaggctgtatgatgctgttgattgcctcctatcttttgtggtatgcaaattgtaatctccttcaagactaacccccatatgtaatcttgtgaaaactatggtctcattagtctgggtgattccttcagaacgttcttgttggcatgattttaagatgtgaaatcgattttgtcaacgtattagcttttccttgcagaacaaagatggtaccatttctacatatgaatgtaaaagaacttctacttggatagaggtgagtttctgcacactaacaccctaacatcacaaaaaaactccatgattgtgcctacatcataacacaatcaatctaatttatgatgttgaaataacatcagcaacatgcatgtacttcaaattataaaacacgactatttgattcagcacgtcatgtatgttccagtacatttacattgaagaaatcaccagttttattgcaaattcttatggccattccagtaagcctgacaagtcttctctttttccaacctagattctcaagccttgcgagagttttccaaatatggtggttgattatccgtaagtgatgcaattacataaatcctggtagccccttttcactttgtagataaaataactccttgcaactcatactgttctataaattggcagatatccagaatgtacctcctcagtgcttcaagctttggtgctgttcaaagaactatgccctggttaccgtactgaagagatagaagaatgtgttagaaacgcatcaatgtttattgagaacacgcaacgcaaagatggctcatggtttgtagcaagagcattttactgactagtggatattttttctctcttctagtctactccctccgtcccataatataagggattttgaatttttgcttgcaacgtttgatcactcgtcttattcaaaattttttgaaattattatttattttatctgtgacttactttattatccacagtactttaagcacaacttttcgttttttatatttgcaaaaaaaatttgaataagatgagtggtcaaacgttgcaagtaaaaactcaaaatcccttatattgtgggacggagggagtaacaatttgtaacacaataacttggttattcggcaggctaggcacttggggtgtatgcttcacctatggggccttcttttcagtacaaggattaattgctgctggaagaacatatgagaatagttcttccatcaggaaagcatgcgactttatattgtcaaaacagctcaatactggcggatggggagaaagccacgtttctaatgaaactaaggtgagtttttttatctctctagctcttttgattgttcattttaatttttatggttgaatacacatatatggttcgttttgttggaagttttgtgataattggcatgtaggaaaaacaatggtgggttaattagcatagtttttttaaagcaggactttaaattcaactagaactggcatttactgaacgtatagtagaattgtagaacaaatgctcataacactagtaatggtgtgcaccctgttgattttgtgtcttgaatatggctgtacgggcatgcttgttcacacccctcaaaataagccatccaagcaaacattcattcttgaatcagcataggatttgaagcacagcacattcatttgatctgttgtgtatgttggagttattcattttcatttgcaacaagctctgcttccattcaaaagaaatctttttatgagggaagtctgcaaacttctacaaattttggcatatttggggcttggtttaatactcactgttaaaacacactttttggaaatgttaaccttttgcagatttccccattgattttcatttttttgtaatatcaaacaggtctatgtaaacatcaaaggtgatcgtgctcatgtagtgaatactgcttgggcaatgctgactttaatttatgctggacaggtatgttttttgtattctcaatttaattctgataggaataacttgtttatcaatgatctctgtaactatttaatttggatgtaagatggagcgagatccaaccccactgcattgtgctgcaaaagaattaatcaatatgcagttagaaacaggggagtttccccaacaagtaagtccccatttcagttttgttgggggtatgtcttatatcgattcatggaaaacttgagtttgtttattcagcagtaattttatggaatgaagtgaacatcacaataaaaaaaggttcctcctatacaatgcatcgtatgtcaggagtggggtttaattctcccagcttctctgatgtgaactatggtcatcaagtaatacataatatgactagactaaattttacattatactgctcaatatagttctgtttacattcagaaaagaactgaaccatgggctattgcttcctcgcacaaatcaagtggtttttaggaaagaaccatggtgtttacattagataaaaatcaggacttcgcaacatgtaaggaactgagatctaccatacaataccttctgtacaaggattttaagacatacaattccatctttaactgtcattatggaaacttgaaaagaaactaattagatggccaattagtttaactcctggggatgttctaaggtgattcagcattacttgtgtgaacatattaaggtctatctcatgttttgcttgtgctcctgtactgatgttaggaacacgttggatgcttcaattgctccctcttcttcaattaccccaactaccgcaacatattccccatctgggctcttggagagtactgctggcatctccgctaaaagaggcatgcatgagcatggcattgtgataaaggaaggggtcgatggcatgccatgaatctcttatatatgctacagatgttactgagcacctcatcaccctatacaaatatgtacttacttatatactacctgatgttgtatatattgtcaagacctggtaaacataattcgctgggaaacagtataggaagagagtgaaacttaaacatgatttgttgttgttgtatttgtatccatgaagataaactgtcttaataaatttctctggg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0140200, RefSeq:Os02g0140200