Os02g0140500

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Revision as of 02:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0140500| Description = Similar to mutator-like transposase [Oryza sativa (japonica cultivar-group)]| Version = NM_001052389.1 GI:115444148 G...")
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Gene Name

Os02g0140500

Description

Similar to mutator-like transposase [Oryza sativa (japonica cultivar-group)]

Version

NM_001052389.1 GI:115444148 GeneID:4328262

Length

11093 bp

Definition

Oryza sativa Japonica Group Os02g0140500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2167665..2178757

Sequence Coding Region

2167773..2168062,2168126..2168257,2168348..2168413,2168504..2168617,2168660..2168753
,2168846..2169104,2169181..2169479,2169569..2169979,2170064..2170312

Expression

GEO Profiles:Os02g0140500

Genome Context

<gbrowseImage1> name=NC_008395:2167665..2178757 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2167665..2178757 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agacctgagacgcacacgttccaccttccctgtggggagatggctccgacactgcaggacgtgtcgtacctgctcgggctaccgctggcgggagcaccagttggtcccgtggacggtgtttttgggtggaaggaggatatcactgcgcgcttcgagcaggtgatgcgccttccacacctaggaccgaccaacacccttcctccgtactctacagtcgggcctagcaaggcttggttgctccagttcactgcggaccttctgcaccctgacgctgatgattactcggtccgacgctcccttgaggcgtacctgttgtggttgttcgggtgggtgatgttcactagcacccacgggcacgctgtggacttccggctggtccactacgcacggtccatcgcggatgctcagccacaggacgtgccgcagtggagctggggttctgccgtgctagcagccacgtaccgtgccctctgtgaggcgtgcacgaagactgacgcgggagcgatcatcgctggctgccctatgttgcttcagctttgggcagccgagaggtttgccataggtcgaccagtggtggacagcgcaccctacggggttggtcgcagcgcgcagtggccagaggacggtcccacgatggggacttactggtgtcgacgtgggcgtcgttacgctcacgtccaggtgagacgtggttacccggacttcgtgttcgagtttgaccgtctccagccgagcgacgtcatctgggagccgtacacagaagaggccgtcgctgcgagagcaccgctaggactttcgtccttgtgcacacgcgaccaggcttactggctcaccatcctgccgatggtgttcgacattttcgttgagcctcactgcccgcagcgtgtgatgagacagttcggacttaggcaggtgtttccgggcaacgtgcagccgaccgtcctccctgccgaccactcgttgactcgacggggacagctagcaggcgcactttgggctccacgtgtacagcagtacgttgacgactgggtgttagctacagaggaggtgatcaacgagctcttcccacacacggaggagaactaccgtgactaccttcgttggtaccttcctcgcactcgtgcgcgtgtgaccttcactccagacgccccagagccgcacgttgccgctgtcacggacgcgtatcccacgcaccgtgaccgagactacttcgtggcggctgatgacgcacgggatatcagtgccgatatcaccgcagtccaagtgaggttgaacagaggtttgcacttgactgacgttgagcagagggtgatcttctcctgtcgcagcgccgtggacgtcgtacctccagctggtccggtacaaccacggcctcgcgcgcctaccgtcggagcaggacctcgacctacggcacctgtttcgcacggacctcgtttgccttcaagcgcccctagcttcggagcagtgcgacctacagcaccggtttcgcacggacctcgtctgccttcgagcgcgttcgcaggcacgaccggcgcttccgcgagctccgcaggggcgttcgccacctcttcgggcgcgttcgccagctcttcctctcacggagcgtcgatccctcgcccacacggatttgcagccgggatcttcggtactagggcctcttcgtctcacgccggtaggactggtcctactagccagttctacgacgacgacttgcacggtgcacaccaccacgacgtactaggctcctctcagcttggaggagctccagaggcgcacactcaggagcagccagaggtcacacctgtacaggcaggacgggttggccgtgccgtacccccggaccgactcacgtactcccaggggcacattagggcgcagggtaggagggacaggggtaagaggcctcgtcagtag</cdnaseq>

Protein Sequence

<aaseq>RPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWK EDITARFEQVMRLPHLGPTNTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEA YLLWLFGWVMFTSTHGHAVDFRLVHYARSIADAQPQDVPQWSWGSAVLAATYRALCEA CTKTDAGAIIAGCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQWPEDGPTMGTYWCR RGRRYAHVQVRRGYPDFVFEFDRLQPSDVIWEPYTEEAVAARAPLGLSSLCTRDQAYW LTILPMVFDIFVEPHCPQRVMRQFGLRQVFPGNVQPTVLPADHSLTRRGQLAGALWAP RVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVT DAYPTHRDRDYFVAADDARDISADITAVQVRLNRGLHLTDVEQRVIFSCRSAVDVVPP AGPVQPRPRAPTVGAGPRPTAPVSHGPRLPSSAPSFGAVRPTAPVSHGPRLPSSAFAG TTGASASSAGAFATSSGAFASSSSHGASIPRPHGFAAGIFGTRASSSHAGRTGPTSQF YDDDLHGAHHHDVLGSSQLGGAPEAHTQEQPEVTPVQAGRVGRAVPPDRLTYSQGHIR AQGRRDRGKRPRQ</aaseq>

Gene Sequence

<dnaseqindica>10696..10985#10501..10632#10345..10410#10141..10254#10005..10098#9654..9912#9279..9577#8779..9189#8446..8694#attgctatgccttgcctaggagcaaattaatccaaaacctgtgctctagctagctggagctagttaggtggccattcttctccatctccggcgagttgattggctgactgactggcggcggccatgtggaggttgaaggttgcggagagcggtggcacgccgttgctgcggtcgacgaatggcttccttgggcgagcggtgtgggagttcgaccccgaccacggcacgccggaggaccgcgccgacgtcgagagggtgcgccgtgagttcaccgaccaccgccttcaccaccgggagtcagctgacctcctcatgcgcatgcaagtatatattaattacatacgctcattcatcccttagttttttaaatatataatgtcgctattcgtttattaataaaagtattcagttgttatatacttctattttggttatggttatatcatcactgcagtacattaagaacgacttatatatagagagagaaagcattatgaacggtcaaatatatgtttaaaaatcaataatctcatatattaaagaacaaaggaagtaataaacacgaatggctctgtatctttcgaaaatcaataaccacctcatatattaaagaaaaaagggagtaataaacacgaatggttctatatctcttatttgtatatattatataataattacttattagttaaactgcaatttactccaatactttttgagaaacgcaatttaccccaatatgaaactgtacggtgtgttcgctttcatttgattttgttgcagggtttcgttcatttcatacggtgttattttcatttccttttgtgttgcaatttgcatagcaaaacaagcatcaacgtcgtcgttatcgtattccacccgtcaataataagcttggagagaaggaggaggtgactgaagaaatcgccatggcttcgttgagacgagctctcgacgagttctcttctctgcaagcagacgacggacactggcctggagacttcagtggtgttatgttcatcatgcctggcttggtagtatatttaaattgtatctgtctctggctaaataatttatgcttagctatttcgtggtttaatttctggtgatctagctaatttctgtacaaataaatgcagatatttgccttatatgtcactggatcactggacactatcatatcaccagagcatcggcgggagatatgtcgctatatctataaccatcaggcatatttttttccgtatatatggacgactgaccataaaataattataatatgctcatgtattcatggtttaataattttaattatagaagaacgtgtgttactccagtacttgcagtacgaatgtttataaaaacaaaaatgggtggtttgcataaattaaagcacgagttcagacttatttgctcagacaaaatataagcatatttttctaagtaacaattaaatgtcattagtataaaaaacactgagtaaatttcccaaaactacatataacttaaccaaactgtgtcaaaactatagatttaagataacgtatcacaaaacacaaatttaccatcaaaattatcattaaaatattgcaaaagtacatatctaataatgtttttgtcacaagactataggttttatttaaattactcgaactatatattattatattagagtaataagttatgatgaatttggtgctaaacctataattttgtgataactttattattaaatctataatattatgatactcgctcttaaatctgcaattccgcgataaatttaatattaattctatagttttatgatacaccattttaaatatataattttataatagcttggttagagaatatgtaattttgtgaaattcactttaaaaacatttgattttccatattttgtgactgcaaattctgcacatgcatgtgttatatagaacgaggatggtggatggggcagtttgatgttgagctcgagcaccatgtttggcacatgttcaaactatatcacccttaggcttctcggtgaagagacaagcaatgagcaattagccaaagggcgcatatggatcatattgcatggcggcactacctttgttccacaatggggaaagatatggctctcggtctgtctactatattatcgcatgaatccacacaataatgaattttgctaaacaattgctttcgttgatttttgtagggttcagtttactttcgaaacatcttgatttatataaacatgactaatataatggttaactaaatgataggtatatttagcactttctaatcgtaccaaccgattcatattttaattaaagtactttcacacgattggttttatagtacaaggttttcactttcgcgccaaaaatttcggccattttggtagaaacgaaatttctggatttttgggattttcggcgttttttagaccattttttgaaattttaacacaatttaactgaatttgactaaattcacaaaaaagttagaaaaatcgaaaatttcaaccgagataatcatttgcctgggtaagaattggaggcagggttcaatctatcgggaaggggaaaaatttcaggggtcaccgaaatttcgaaaatctttcagaaatttcgaacggaattttcaaacaaaatttgaatttaaacaataaaaataaagaaattttaccaagatcagagtatagatgagcatcgagtctattcaatccaaagcagaggaacaggagattgaaacacagtaacacgtaaggatgcgaggcttgtgcggcttgtgtcgtcgtccggtcatcgtcgtgctgccgaagagcgatggagccgccagcggcaactctagccaaacggaggatgcgaggcccgcggcttgtatcgtcgtcgtggtgccgaagagccacggagacgccgccggccactccaaccaacccgccgcctccggttccggccaccgccgcggccgctgttcgctagcttgggaggatggcgacctgctgcctgctgggcgagctgtcggaggatagcgaagcagcagcagcctttggtatataagtgaggaggggataggaaattgaggatttttaccatgaacattgttttgccgaaatttttgaccggagctcatgtttatcaggacccaccaatagacccgaaatttcgtaaatttcgttccgaaattttgaaccctgattagagggaaggtagaaaaaaaaagcccaaaaggcaaaaagaaaggagaaaaaacgaaataagaaaagaaaaacggcggaaaaaaacctaagcccgaaaaaaaaagggacggaggaaaagaaaaaagatggaaaaaagaaaataacagcgaaaaaagaaaaaaggacaaaaagagaaccggaaaccttaattattatatatataggtataaaaaagaaaaaacagcgaaaaaagaaaaaaacggacggaaagagaacaggaaaccttacttatttttcttattaggtatagataagccatatgacttttttctagtcaaacttctttaagtttgaccaattttatataaaaatttagtagtattttcaacacaaaacaaacatattatcagaatatattcaatgttatatttaatgaaactaatttgatattttagatgttgttaaatttttctataaatttgggccaacttgacaaagtttaattatgaaaaaaatcaaacgacttataatataacgcgttgattgatttcggacaaattaatttgattcactacagatacttggagtgtacgagtgggcaggaaacaaccccatcttccctgagctatggctgaccccacaatttcttccttttcatccaggtatatatatactagtaataatcatactgtatactcctacatcaaatagtagctagttgcacacaaatcaaaaacagtttaatggcaatgcctggagtttatatcagacttaaggttcatgaaaattctttaattttgaactgaatttacttttgtgcaggcaaattctggtgcttaactcgcatggtatacctgccgatggcctacctatacggcaagaagttcgtgggccccaccgcgccgaccatcctggcgctgcgagaggagatttactcggcccactacctcacaatcgattgggcccaggcccgcagcgcctgcgccaaggtaatttttgggccgggccgaatttgttgggcttcttgttgggggaggagtgccccgcgaggagaattttttttatttataattttttttattaaaagttttacaaaaataattttccattttgaaaattgacgaatgtagtcgcctaccgccctctgggagggcgatttttaaaaatcgccctctcagagggcggcgaaaatgacgtggcagacggccgttcgctctcgggcgacggccgtcaacgaaatttgcaggcggcccccttgccgccctccgctagggcgattttatactgtgcggggggccgcctgcaaatgggcggcgagggggggcatggaattttgcaggcggcccccttgccgccctccgctagggcgattttgtactgtggagggggccgcctgcaaatgggcggcgagggggcatggaattttgcaggcggcccccttgccgccctaggggagggcgatttttgcctcccccctataaagcccagtccctcctctgtgaaatttcattatattcactaaaaatccaaaaaaaacgaaagagagagaggggagggcagcagaaggggagcggcgaagccctgctggttcgctcaattcatcacaggtatgctcccatacatcttttgcatttgtactaatatgttatgtttgagtatatatgttgcgttttagttttagttccatatattttagcacatctgtagcacacagcacatatgtgtagatccagagcatagaatataatagtatgaattgagacatagacagtagtgttaattgtaagatgtagtttagtttgatctgaagaatgtaacgtaattttagaaatttagagaacaatattgtagagaatgtaacttagggcgtagtacagaaatgcgaggttaacacagttattgttttcatcaggcacaatgtcaagtaaggtcacatttcagatagttcacggtgaaggaaatattagatttggtccagatggtgttgatctgtcagattttgtaatgacatctaagggcatcgataggcctgcggagagaacatttcagtcaatttatagttggttgttgagaggatttagaatagaccaagaagtctacacaatgtcagtgtcagttgtagtgagtcgtgcaacagaaggttatttttgggaactaatgccgatggacagcactgatgcttggagacggtatgtggaaatggcttttgaacggtcatggcccctcgttatatttgtgtcggtacaagagaaagatataaatgtttcaatgcaaaccgaagatgtagagggtcctatcaatgcaagggatgttgttggaccatcgatgcaaaatgaggaaaatcaacgaagggaggaacaggctatgggcatggcggatgagggggagagagtcggtataattgttgatgaaatggagagggaagattcggataatgaggaagtggacgacgacgcatcatccgatgaggaaggtgatgtaatggccactgattgggcaaatgaggacttctctggacttgttatatcagagggtgatcatgtaccctgggagtataaggagaacgaggtaattgagggtgcaaggtatgctcataaggatgagatgaaggagacggtgaagcattgggcagtttccttgcagagagagtttagggtggtcaagtcaacaaattatgtgtatgaagtgaggtgcatgaaggaagattgtccgtggcgtgtccatgcatataagggtaaatggaatgattattggaaagttagcattgtgaccgagcacaagtgctacttacaaggggtggagaagtatcaccgaaatatcacttcagcttttgtggcaagtgagatgtacagcagtgttgttggtaacattgtctttgaaccaaaatcaattattaggcacatcgagaacaaattcaagtacaccataagctatgcaaaggcctggagagccaaacaaaagatcattgagatgaggtatggcacatttgaagcttcttatgataatttgcctcgtttgttagccaccattgcccagaggaataatgatacgtactatgacctacatacatttacatcggttgatgatcgaacaaagagtatgctgcaaagagcctttttctcattgggtgcttgcatcaatgcttttgtgcattgtcgacctgttctatgcatagatggaacttttatgacaggtaaataccgaggtcagatattgacagcaattgggtgtgatgggaacaaccaggttctacctatggcttttgcatttgtagagagtgagaacactgaaagctggtactggttcctagagagagtgcacattgcagtggtgcgtatgaggcccaatgtttgccttatacatgatcgtcatgcgggtatgttgcgggctattgactacttgcagaacggttgggatgagaagggacttccagctaagtggcctgatgttcggagtcggtggtgcatgcgtcacatgggtgcaaatttctacaagcaattcaagaacaagcatcttatggagctctttaagaggctctgtgcacagaaccaagagaagaaatttaattagttgtgggacaagttggatgagttgacaacgaagcaaacagatgagcaatctcgcagaccactagttgaatgtgacgagcctcccatacctcttggtgcattacatgatgacccaccaacaatgagaaggaggtcagggtcgtccatcagaaatttcactcagtggattgagaatgagcctaaggagaagtggtctctattgttcgacaccgatggatctcggtatggcataatgacaaccaatttggtagaggtgtacaactgggtaatgcgaggagttcgggtacttccattggttgctattgttgaattcatccttcacggcacgcaagcgtactttagggatcgatacaagaaaattggtccgtccatggccgataacaacatagtgtttggcaacatagtgacaaagtacatggaagataaaatcaaaaaggcacggagacatcgagttgttgctcaaggcacacaagtgcatcggtatgaaataatgtgtgttgataggagcaggcgtggtatctatcgcaagcaagccgtgcaggaatgtgtcttgaaggcggatggtggatgtacctgcagttgtatgaagccgaagcttcatcaccttccttgctcacacgttcttgctgctgccggtgattgtggcatatctcccaatgtgtacgtctcaaattatttcaggaaagaagcaatctttcatacatggagtgaggagatatatgggttcgggatctcaggatcttacacaacgctgagtgcccaagttttttatattccagatccatctaagttaagggtgaaaaagggtcgacgccaaactagacgcatcagaaatgatatggatgagtcagaagcaggtgggaggactttacgctgcagcaagtgtgatctgcgcggccatacttacaagaaatgcccgaagaatgcagaagttccaagcggcgcagatgctagtccatctggacaggcaagtgatggtaggcgaccacctggtgaaggaacaacaagcaggcgcgcaaggccaaggtgtcgtcgcgcagcaggcgattccatggtgtaacaaagctttcgatttaggaaataaaatgctgttgtgatgtaatgagtgttcggactaaatacttctatcgtgtaatttcaattcaatgttgttgtaatgagtacctccgactattgttatactagtagtattgcgaactattcggtgttgtatcataatgttatcgtgatgagtgttcggactaaacacttttgtttgtttgtactcttgtttaatatgtgttagtaattcgcttatgaacatttattacttatgttgaactaattatttatatgtttctgatcaacctatttgatgaaggtatggcgtacgacacaccggcgctgttgaaccgtgggattgacaggaaccaccgctcgttcctgtcagcagtcgagggtgcacagctcggcaccttccgtccacgcacgtcgcgcgagtggttgcgtgtcgacccccgtcacgttccttggtacgcgtatgttcacatttcaactcaactttgctttgtgttgtacttatgtttgaagtttgctctatacaggttgcgtgcggcaggccttctaccactttgtaggcttgttgaggcggcggcggacgaccgtgacccagcgaagcggtgggatgcagaccggtcactccttgccgctcttgtagaccgctagagacctgagacgcacacgttccaccttccctgtggggagatggctccgacactgcaggacgtgtcgtacctgctcgggctaccgctggcgggagcaccagttggtcccgtggacggtgtttttgggtggaaggaggatatcactgcgcgcttcgagcaggtgatgcgccttccacacctaggaccgaccaacacccttcctccgtactctacagtcgggcctagcaaggcttggttgctccagttcactgtaagtaaataagttgttattatcatacgtgcttatttgcgaccggatgagtgttttgtactaacatttcattcttaattgtaggcggaccttctgcaccctgacgctgatgattactcggtccgacgctcccttgaggcgtacctgttgtggttgttcgggtgggtgatgttcactagcacccacgggcacgctgtggacttccggctggtccactacgcacggtccatcgcggatgctcagccacaggacgtgccgcagtggagctggggttctgccgtgctagcagccacgtaccgtgccctctgtgaggcgtgcacgaagactgacgcgggagcgatcatcgctggctgccctatgttgcttcagctttgggcagccgagaggtttgccataggtcgaccagtggtggacagcgcaccctacggggttggtcgcagcgcgcagtggccagaggacggtcccacgatggggacttactggtgtcgacgtggggttagtgcaacttcgctgcgttataagtttatcagtcgtctttttttttcttcacataacatgtctaattccgatcatgtttattgcagcgtcgttacgctcacgtccaggtgagacgtggttacccggacttcgtgttcgagtttgaccgtctccagccgagcgacgtcatctgggagccgtacacagaagaggccgtcgctgcgagagcaccgctaggactttcgtccttgtgcacacgcgaccaggcttactggctcaccatcctgccgatggtgttcgacattttcgttgagcctcactgcccgcagcgtgtgatgagacagttcggacttaggcaggtgtttccgggcaacgtgcagccgaccgtcctccctgccgaccactcgtgagttcggattgttcatttctaaatttttatgataattacttcatcgagccatataatttacctctcttcacaggttgactcgacggggacagctagcaggcgcactttgggctccacgtgtacagcagtacgttgacgactgggtgttagctacagaggaggtgatcaacgagctcttcccacacacggaggagaactaccgtgactaccttcgttggtaccttcctcgcactcgtgcgcgtgtgaccttcactccagacgccccagagccgcacgttgccgctgtcacggacgcgtatcccacgcaccgtgaccgagactacttcgtggcggtacgtccaatttgtattacttcttacaattatttcatttatcttgcataatataggacaactactgaattttttatttccatcttgcataggctgatgacgcacgggatatcagtgccgatatcaccgcagtccaagtgaggttgaacagaggtttgcacttgactgacgttgagcagagggtgaccttcgaccggatgcaggagaagatgcgtgtggtcatgcgcatcttctcctgtcgcagcgccgtggacgtcgtacctccagctggtccggtacaaccacggcctcgcgcgcctaccgtcggagcaggacctcgacctacggcacctgtttcgcacggtactgctcagcccagaggtttcttaagttttgtttctgtttttctacgaaaacatcaccccgtcgtaacttgatgttccatcctcgcaggacctcgtttgccttcaagcgcccctagcttcggagcagtgcgacctacagcaccggtttcgcacggtacagttcagcccagatattagttcatttttgtttcagcttttgcacgaatatgtcaccatgttttaactgcacgtttcctcatcgcaggacctcgtctgccttcgagcgcgttcgcaggcacgaccggcgcttccgcgagctccgcaggggcgttcgccacctcttcgggcgcgttcgccagctcttcctctcacggagcgtcgatccctcgcccacacggtactttactttttattactactgttaaatacttgtacgaaactgatggtccttgtccagcaggatttgcagccgggatcttcggtactagggcctcttcgtctcacgccggtaggactggtcctactagccagttctacgacgacgacttgcacggtgcacaccaccacgacgtactaggctcctctcagcttggaggagctccagaggcgcacactcaggagcagccagaggtcacacctgtacaggcaggacgggttggccgtgccgtacccccggaccgactcacgtactcccaggggcacattagggcgcagggtaggagggacaggggtaagaggcctcgtcagtagtgttctacctcttcagtccttatgtgaccgtttcttttgtcttacaaacttgtaaagcagtactacttttgctattactactgcagtactacttgtgtttgtctcgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0140500, RefSeq:Os02g0140500