Os02g0142300

From RiceWiki
Revision as of 02:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0142300| Description = Similar to Nuclear protein-like| Version = NM_001052397.1 GI:115444164 GeneID:4328270| Length = 5124 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0142300

Description

Similar to Nuclear protein-like

Version

NM_001052397.1 GI:115444164 GeneID:4328270

Length

5124 bp

Definition

Oryza sativa Japonica Group Os02g0142300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2318212..2323335

Sequence Coding Region

2319758..2321995

Expression

GEO Profiles:Os02g0142300

Genome Context

<gbrowseImage1> name=NC_008395:2318212..2323335 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2318212..2323335 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gagttgcctggtgggttgcccttcatgaagccagaggattaccagtactttggaacattgctgaatgaggaggagggggagcagctatctccagaagagcagaaggagaggaagatcatgaagctcctgctcaaggtgaagaatggcacacccccacagcggaagacagcacttcgacagctgacagacaaagcaagggaatttggtgctggcccattgttcaacaagattctacccttgctcatgcagccaacacttgaggaccaggagcgtcatcttctagtgaaggtcattgacagggtactgtataagctggatgagctagtccgtccatttgtgcacaagattcttgtggtcatcgaaccacttctgattgatgaggactactacgctcgtgttgagggccgggagatcatctcaaatcttagcaaagctgctggtcttgctactatgattgccgccatgagaccagatattgataacattgatgagtatgtgagaaataccactgctagagcatttagtgtggtggcttctgctttgggtatccctgctctcctgccattcttaaaggctgtctgtcagagtaagaagtcttggcaagctcggcacactggtatcaagattgttcagcagattgctattcttatgggctgcgctgttctgccacatctcgagtccgtagtcgagatcattgagcatggtcttagtgacgagaaccagaaagtgaggacaatcactgccctttctcttgctgcacttgctgaggctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggtatcagatctaaccgtggaaaggttcttgctgccttcttgaaagcaattggttttatcatccctcttatggatgcgctgtatgccagttactacacaaaggaggtcatgcaaatcctgattagggagttccagtcaccagatgaagagatgaaaaagattgtcctgaaggttgttaaacagtgtgtcagtacagagggtgtagaggctgattatatctggaatgacatccttcctgaatttttccatcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtggaaacaacggtagagatggcaaataaggttggagttgctgatattgttgggaggattgttgaggatctgaaagatgaaagcgaaccttacaggagaatggtaatggaaacagttgagaaggtagtggctaatttgggtgcttcagatattgatgctcgtttggaggagctgcttattgatggcatcttgtatgctttccaagagcaggcaagtgacgatgcaaatgtcatgcttaatggttttggggctgttgtcaatgcactgggacagggggtcaagccttaccttcctcagatttgtggtaccattaagtggcggttgaacaacaagagtgcaaaagttaggcagcaagctgctgatctgatctcaaggatagccattgtaatgaaacattgccaggaggagcagcttatgggtcacttgggtgttgtgctgtatgagtatttgggagaggagtaccctgaggtgttgggttcaattcttggagcactgaaagctattgtgaatgtcattggcatgactaagatgacaccgctgatcaagaatcttcttcctcgactgactcctattttgaagaacaggcatgaaaaggtccaggagaactgcattgatctagttggtaggattgctgatcgtggagcagaatttgtgcctgctagggagtggatgaggatttgttttgagcttcttgaaatgttgaaggctcacaagaagggtattagaagagccaccgtgaacacatttggttatattgcgaaggctattgggctgcaggatgtgttggctactctgttgaattacttgaaggtgcaggaacggcaaaaccgtgtctgcacgactgtcgcgattgccattgttgctgaaacctgctcaccttttacagttctgcctgccctgatgaatgagtaccgagtcccagaactcaatgttcagaatggtgtcctgaagtctctctctttcctctttgagtatattggtgagatgggcaaggattacatatatgctgttactcccttggttgacgatgctctaatggacagagatcttgttcactggcaaactgctgcctctgctgtgaagcacatggctcttggtgccaaacatatttga</cdnaseq>

Protein Sequence

<aaseq>ELPGGLPFMKPEDYQYFGTLLNEEEGEQLSPEEQKERKIMKLLL KVKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVL YKLDELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDID NIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMG CAVLPHLESVVEIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDTVLKPLWKG IRSNRGKVLAAFLKAIGFIIPLMDALYASYYTKEVMQILIREFQSPDEEMKKIVLKVV KQCVSTEGVEADYIWNDILPEFFHHFWVRRMALDRRNYKQLVETTVEMANKVGVADIV GRIVEDLKDESEPYRRMVMETVEKVVANLGASDIDARLEELLIDGILYAFQEQASDDA NVMLNGFGAVVNALGQGVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKHC QEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPLIKNLLPRLTPI LKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTF GYIAKAIGLQDVLATLLNYLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVP ELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLVDDALMDRDLVHWQTAASAVKHMAL GAKHI</aaseq>

Gene Sequence

<dnaseqindica>1341..3578#tctcgcctcgtgcaatctctccaccccaaaccctaaccgcctctcccccgcgccgtcgccatggacgccatcgacgcggagctcgcgcgggcgcaggaggagcgcaagaagatggaggaggccctggccgccggcgcgcccatggccgtctcctccgtcaccttcgacaccgatctctacggcggcggcggctccgaccccaaccgcttcgccggctacgacacctccatccccgcctccgaggacgactccgaggcggccgtcaaccccgccgcccgccgcctcgcctcctacaccggccacgccgtcgccgccgccgacatcccccgcgccgccgaggacgacggcctccccaagaagtcgcagcgcatcatcgaccgcgaggatgactatcgccgccgccggctggcccgcatcatctcgccggagcgccacatcccttcgccgccggtgaggccaccccggacccttccgtgcggacctatgctgatgccatgcgcgagaatgacctgcagaagcagaaggagcagctgctgcgtgatatagctcagaagaagaaggaagaggagaaggccaaggagaagaaggccttgcctgagcagcagccagtcggcgcagcaatagatgggatcagtcgcaagatggtgatgcttctgctgcttctggatccaagaaggcgaagacctcctccgattgggatgctcctgatgcaactcctgggattgggcgctgggatgccacccctggtcgtgtcggggatgcgacgccgtcggtgagaaggaatcggtgggatgagacaccaactcctgggaggatggccgatgcggatgcaacacctgcagctggtggcattactccaggtgccacaccttctggagcttgggatgctactcctaagctgcctggtgggcttgtcacgccaacacccaagaagcagagatcgagatgggatgagactcctgctagtatgggtagtgctacacctggaggcactggtgctgcgacgcctgcaggttacactcctggtccgacgccatttggtggtgacaaccttgcgacgccaacaccccggccagattgcttctcgtggtccaatgactccagagcagtaccagctcttgcggtgggagcgggacattgaggagcggaacaggcctcttacggatgaggagcttgatactatgttccctcaggaagggtacaagattcttgaacctcctgcttcataccagcccatacgcacaccagcaagaaagctgctcgttacaccgacaccattgggcacaccattgtatgctattcctgaggagaatcgtgggcagcagtttgatgtgccctaggagttgcctggtgggttgcccttcatgaagccagaggattaccagtactttggaacattgctgaatgaggaggagggggagcagctatctccagaagagcagaaggagaggaagatcatgaagctcctgctcaaggtgaagaatggcacacccccacagcggaagacagcacttcgacagctgacagacaaagcaagggaatttggtgctggcccattgttcaacaagattctacccttgctcatgcagccaacacttgaggaccaggagcgtcatcttctagtgaaggtcattgacagggtactgtataagctggatgagctagtccgtccatttgtgcacaagattcttgtggtcatcgaaccacttctgattgatgaggactactacgctcgtgttgagggccgggagatcatctcaaatcttagcaaagctgctggtcttgctactatgattgccgccatgagaccagatattgataacattgatgagtatgtgagaaataccactgctagagcatttagtgtggtggcttctgctttgggtatccctgctctcctgccattcttaaaggctgtctgtcagagtaagaagtcttggcaagctcggcacactggtatcaagattgttcagcagattgctattcttatgggctgcgctgttctgccacatctcgagtccgtagtcgagatcattgagcatggtcttagtgacgagaaccagaaagtgaggacaatcactgccctttctcttgctgcacttgctgaggctgctgcaccatatggtatagaaagttttgatactgttttgaagcctctgtggaagggtatcagatctaaccgtggaaaggttcttgctgccttcttgaaagcaattggttttatcatccctcttatggatgcgctgtatgccagttactacacaaaggaggtcatgcaaatcctgattagggagttccagtcaccagatgaagagatgaaaaagattgtcctgaaggttgttaaacagtgtgtcagtacagagggtgtagaggctgattatatctggaatgacatccttcctgaatttttccatcacttctgggttaggagaatggctctggaccgcaggaactataagcagcttgtggaaacaacggtagagatggcaaataaggttggagttgctgatattgttgggaggattgttgaggatctgaaagatgaaagcgaaccttacaggagaatggtaatggaaacagttgagaaggtagtggctaatttgggtgcttcagatattgatgctcgtttggaggagctgcttattgatggcatcttgtatgctttccaagagcaggcaagtgacgatgcaaatgtcatgcttaatggttttggggctgttgtcaatgcactgggacagggggtcaagccttaccttcctcagatttgtggtaccattaagtggcggttgaacaacaagagtgcaaaagttaggcagcaagctgctgatctgatctcaaggatagccattgtaatgaaacattgccaggaggagcagcttatgggtcacttgggtgttgtgctgtatgagtatttgggagaggagtaccctgaggtgttgggttcaattcttggagcactgaaagctattgtgaatgtcattggcatgactaagatgacaccgctgatcaagaatcttcttcctcgactgactcctattttgaagaacaggcatgaaaaggtccaggagaactgcattgatctagttggtaggattgctgatcgtggagcagaatttgtgcctgctagggagtggatgaggatttgttttgagcttcttgaaatgttgaaggctcacaagaagggtattagaagagccaccgtgaacacatttggttatattgcgaaggctattgggctgcaggatgtgttggctactctgttgaattacttgaaggtgcaggaacggcaaaaccgtgtctgcacgactgtcgcgattgccattgttgctgaaacctgctcaccttttacagttctgcctgccctgatgaatgagtaccgagtcccagaactcaatgttcagaatggtgtcctgaagtctctctctttcctctttgagtatattggtgagatgggcaaggattacatatatgctgttactcccttggttgacgatgctctaatggacagagatcttgttcactggcaaactgctgcctctgctgtgaagcacatggctcttggtgccaaacatatttgagacatctccccatgtcatcaatgctgtcatggaggcgattgaggggatgagagttgctcttggtccagctgtgatcttgaattactgccttcaaggccttttccatccagcaaggaaagtatgtgaagtatattggaaaatctacaactcaactatatattgctgcacaagatgcgcttgttgctgcttatcctgcactggatgacgatggggataatatctacagccgtccagagctggcgatgtttgtctgttcaatgtaagtgttgtttctttcctattattttacttaaattttgtggcaaatattattgaaacttctgctgttagttacgaagtaagttgtgatattgtatcatgggttcacatttgttcattcaggtgctctctttttctaaagagcaaccattgcattactcgcatgtatgattccttttcgtttactgctgtccttgcaagtgttttatcagtttgtactgttcctcaacaaatgggcatccttagcctgggctgctgtatgttattaggccttaggcagtttgacctgttggaaatagagctcagctttttataattcactttacattgatatgctagaattgtatggtcttcttggttacttgatttcagtgaacatctatcacgagctgcctatattgaatggactaggttgcaccaacagctgttttgttctgtttgctccttttcagtggtgccaacgctttggttattgttatcatatgaaccatagtgtgcaggcactagttcgtttttcctttcatgtttctttctgcaaatttgctttatgttctgcctttttcttccctctatgcaaagaacacatctgatgtgagaacgcattggcaggcaggatgtacatttccatgtaccgtcacccaatatatgcgtgtgaagcttgaactcagtgatatttgagttagcagatattcaatttatggtgtttacttgtgatggatgcattttcattgaagttgcatttcttttttctgtatttgcaggcttgttgcttctgaagggggtgcaatgtttaggatatatttcccccttgtttacttgtgtaatgtaatgataaattgctacctgttctgatgcactgacgtttttgttactggttttgtgttcagggtattttgacccggtttgctgaggagttcccttagattaaaagatcccaaggagatgatatctgtcctgcatgtcacactttgttgccgttgcatgatcctctccgctctgaagagaaaatgatcaacatagtattactgctgtcccaataactgtattattagcaaaaaaatgttataaagctactatcgagattgtgaacttgtcttattattagagtctgtattagtaatgttattactatgcctggaacgtggtattagtattactaccctgctctgagttgatggatcaatggatggatggttagatcgtatagtgtctgttttcttcccggactgttagttgttactttagaaaatgttttaaattgtattgcgtatgttgtggtttgtgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0142300, RefSeq:Os02g0142300