Os02g0147800

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Revision as of 02:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0147800| Description = Similar to Homeo protein (Fragment)| Version = NM_001052422.1 GI:115444214 GeneID:4328295| Length = 5792 bp| Defini...")
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Gene Name

Os02g0147800

Description

Similar to Homeo protein (Fragment)

Version

NM_001052422.1 GI:115444214 GeneID:4328295

Length

5792 bp

Definition

Oryza sativa Japonica Group Os02g0147800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2620422..2626213

Sequence Coding Region

2621302..2621711,2622442..2622616,2622694..2622811,2623381..2623496,2623626..2623964
,2624113..2624307,2624505..2624594,2624887..2624935,2625286..2625518
,2625632..2625952

Expression

GEO Profiles:Os02g0147800

Genome Context

<gbrowseImage1> name=NC_008395:2620422..2626213 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2620422..2626213 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaataccccagaaaagaaaccactgtgctatacttctagaagagcactgcaacagaggacagaatcctcttcggaattgatctctgtatcaaaaagagcaacccgccagaatactccacgcaagccggattctcctcccaaacgaacaacaagaagtagcgctaacctggcgaaatgtatagagaacaaacaccatagcagtcctctgaagcggcggcggggttcagatgcggctaccggaaagtctgcaacagggccaacaaggaggaagcataaacagaaaaggaaaaatgatgagagtgatgaggtcagtcgcatggaaaaaagagcaagatatttacttatcaaaataaaacaggagcagaatttgctagatgcatactctggagatggttggaatgggcacagtcgagagaaaataaagccagagaaggagctacagcgtgctaagaaacagatcatgaaatacaaaatcgctatccgtgacgtcattcaccaacttgatttgtgtagttccagtgggagcaaggatgactctgtgattccaccagatgggtgtcacgagtctgtcaatcctgaacatacaatatgttcaaggtgcaaatcccacgagtcatttcctgacaataacattatattctgtgaggggggctgcaaactggcgtgtcatcagaaatgtttggagcctccttttgataaaattcttccaactacccgccatgggcggctttgcaaacactgttcttccaagatgaaaattttagacgccattaatgcccatctggggacaagttttacagtgaagtgtccctccagtgatattttcaaggaagcagctgaacatttcaactctgatgatggactgggccaagattggctatctgagtattcaggtgatgaggactatgaccctgaagaaaatgaggccagcagcagtggtgaagagaataaatctgccgattccaattgttcagggagtccactttattctccaaatgatgatattccagacttcatatcagcagatttcaatgatgctgaaggattctgtcgtgaaagttcaaatctaggaatcgattttggtgaagatggtttggctgagattcttacccaccaaaggccaagaagagatgttgactatacacaacttaatgagcaaatgtttggagagcctattggcaatgacgaacagagtgaagatgaagattggggtcttaacaagagaaagaaaagaagaactggttcaactggtgttgggactaattccgtagagggtcgatcagatgtcaaatccaataagaaagcccaacctcggagaaaacttttcaggattcctcctgcggcagttgaggtgctccgtaaagcttttgctgaaaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgggtatttcttttgaaaagattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaagggtgaaagtcgttattctggtcccagcaaaaggtcaagaacaagcatagaaaaggctgaaacttcagctaaagtggatcaaatggacaactcatgctttcttcccttatctgaaataatcaacgtgcccacacgtctgcagaaaggtcttgataagaagccaaaatcaattaacagccctccaagacctcaggacaatgaaacttgcttgtcgccaactgataaaaccaaggagggtacaccgcctacgatcaagccttccatcacagattctagtcaactgatgaataacaacatcggcactgaggagactgctgtttcttgggtggacacttgggcctctgacgctctgcatttcttggacgtgagcgatgatgaacatttcttcgatgtgatcgagaaggtgtgcggtctcgagaatcggctgcagcggttgaaggagaacatgctatcatcgtcatcgtcaactgacaacaatgtggctgctgagagtggcttgcaaaacgaagttgtgcttgtaccagctgctgagctcaaggataaagcatcttaa</cdnaseq>

Protein Sequence

<aaseq>MNTPEKKPLCYTSRRALQQRTESSSELISVSKRATRQNTPRKPD SPPKRTTRSSANLAKCIENKHHSSPLKRRRGSDAATGKSATGPTRRKHKQKRKNDESD EVSRMEKRARYLLIKIKQEQNLLDAYSGDGWNGHSREKIKPEKELQRAKKQIMKYKIA IRDVIHQLDLCSSSGSKDDSVIPPDGCHESVNPEHTICSRCKSHESFPDNNIIFCEGG CKLACHQKCLEPPFDKILPTTRHGRLCKHCSSKMKILDAINAHLGTSFTVKCPSSDIF KEAAEHFNSDDGLGQDWLSEYSGDEDYDPEENEASSSGEENKSADSNCSGSPLYSPND DIPDFISADFNDAEGFCRESSNLGIDFGEDGLAEILTHQRPRRDVDYTQLNEQMFGEP IGNDEQSEDEDWGLNKRKKRRTGSTGVGTNSVEGRSDVKSNKKAQPRRKLFRIPPAAV EVLRKAFAENELPARSVKENLSTELGISFEKIDKWFKNTRCAALRDRKGESRYSGPSK RSRTSIEKAETSAKVDQMDNSCFLPLSEIINVPTRLQKGLDKKPKSINSPPRPQDNET CLSPTDKTKEGTPPTIKPSITDSSQLMNNNIGTEETAVSWVDTWASDALHFLDVSDDE HFFDVIEKVCGLENRLQRLKENMLSSSSSTDNNVAAESGLQNEVVLVPAAELKDKAS</aaseq>

Gene Sequence

<dnaseqindica>881..1290#2021..2195#2273..2390#2960..3075#3205..3543#3692..3886#4084..4173#4466..4514#4865..5097#5211..5531#aaggtttcccccaactcaactcccctccccttcgcttcccttcccttctctcctctcctctcctctcctcttctcccccccaaattcgccgccgcctcctctccccctctcctcctacccttccccgcggcggcggcgagaggcggcgcggtgcgtcccctcccctcccccgcactctgctggtgctggtgctgggctgccgttgggggaggcgggagatccgcccgggcccggggttccgtttcctcctcctgctcggtaagcggcaaaccctagcttcggtcggttgcttggatgggggtggatcgtgtgttcgttcgtttgttttaactccgctgtggcttgggtagtgggagaccgaagattgctgcgtcttcctctcgattcggttggtttagtgagggattcatttgctgtttagtgtgctagttagtggttgaatccttcgtgtaggatttagcatccaaggttggggtgcgcagttcatttccgcgacatttttgggagagggggtttcaactgagccccaatgctccgcgctaggtctgtgctcggtgagatcttcgggtgtgtaatgtgtgtgctggaatttgctgctctggttagagatctagaatttctcattatttgttctatgcttttcggtatttgccctgctggttagggcaggcagccaatagatgtactactactttgtttagattacaagcatctgtctttttttacatgcagcggctagtacattttcttgtctgctacgtactatgtaatgctgcttactgtacttgttatcatcatgtccattcagctctcagattaatactgtaatgtgttctttatggtaggtctcaacctgttgtaatactatccatcaccagcaatgaataccccagaaaagaaaccactgtgctatacttctagaagagcactgcaacagaggacagaatcctcttcggaattgatctctgtatcaaaaagagcaacccgccagaatactccacgcaagccggattctcctcccaaacgaacaacaagaagtagcgctaacctggcgaaatgtatagagaacaaacaccatagcagtcctctgaagcggcggcggggttcagatgcggctaccggaaagtctgcaacagggccaacaaggaggaagcataaacagaaaaggaaaaatgatgagagtgatgaggtcagtcgcatggaaaaaagagcaagatatttacttatcaaaataaaacaggagcagaatttgctagatgcatactctggagatggttggaatgggcacaggtatgcactgcttctctcttactgttgtaagcttctgagttttgactatagaaatattcaaatccaactaatcttacatgccaaaaggggaaaaagaaacctgaaattatttaattcatgcttgcatgattgtagtttttgacggaaaactcaaaagcaaaccagattaaaccttctcagtaacaaagttccattttgtttagggcaataatgagcaagggcttagaatgaggtttagaactactcatgaagagaaaatcattcacatttactgtatgcaaaccagatgagaacttatgttttaaccaccaatagcatcttaataataggaggatcagaatccatccctagctcattggctgtgaccaactcctcatgggtcagaaataatactggtatatgtatctgttggaagtaatcattttgacttgcgtagttgaagtagtgtcttgggatagaagtgctttactgtggaggacctctcaatcatgatatacacatctagtttgccttctaattgttaatttgttactgtcagttgtcaattagctatcaaagaactgttctataacggtctatactgatgctctcagtaagcttcacttgtgttgttttatatctaattctctctctctatatatatatatatatatatcctgatgttgcatagaatgaagtaacagtatgctatttatactatacttactaaagggtgtgcctttcctaacagtcgagagaaaataaagccagagaaggagctacagcgtgctaagaaacagatcatgaaatacaaaatcgctatccgtgacgtcattcaccaacttgatttgtgtagttccagtgggagcaaggatgactctgtgattccaccagatgggtgtcacgagtctgtcaatcctgaacatgtatgtatgtcatcaagtgaatatcaaactccctacttccataggattatatattgatacaatgttctcttttctagacaatatgttcaaggtgcaaatcccacgagtcatttcctgacaataacattatattctgtgaggggggctgcaaactggcgtgtcatcagaaatgtttggagcctccttttgataaaagtgggtaatcatttctcttaacttctttcaaaatatgaggttccacctttttggtaaatgaatgtagttttgtttagtgtcaattttttaatatatatttctactttatgtagtgaccagtgcagtgtacgaactcaaccataatctgaactttccaatttcctcaaaaataaactgaacttagcactctactatgttatgttgtggtccaacacttcaaaataaatgtaggacatctctagtgtgtagagtctagactctgctgtcactccatgcataacttgtcttctactttttagcatgtgatgattctttagcatgaataaacatttatatgcctttttaaagaaatgaaagtatggcatgagttcctataaaataatgtatgttttaagttattgcttcagaataatgtaatgtggtgtgctgtaccaaacatcatagtgtaccttctattctgatgattatgcatccatgtcacctgctgcagttgctccacctgatatgttgctgcaatggctactttacagtttgtgatgtatctaactttgttttgtggtatctctcagttcttccaactacccgccatgggcggctttgcaaacactgttcttccaagatgaaaattttagacgccattaatgcccatctggggacaagttttacagtgaagtgtccctccagtgtaagtttttttgttctttacgttcaagttttgatcaccttttagttctttacgttcatgttttgatcaccttttactcaagtggtttaattgtgttgaataagccttgattctgcttgctttctataggatattttcaaggaagcagctgaacatttcaactctgatgatggactgggccaagattggctatctgagtattcaggtgatgaggactatgaccctgaagaaaatgaggccagcagcagtggtgaagagaataaatctgccgattccaattgttcagggagtccactttattctccaaatgatgatattccagacttcatatcagcagatttcaatgatgctgaaggattctgtcgtgaaagttcaaatctaggaatcgattttggtgaagatggtttggctgagattcttacccaccaaaggccaagaagagatgttgactatacacaacttaatgaggtgtgctttatcaacaggaaattgtattctatgaatagcggagtttaaatagatgtgtctgttattaactgtgaatactgtattagtaagttccttttcatcactaagatggatcaacgctattatgaccacttctctccattcacagcaaatgtttggagagcctattggcaatgacgaacagagtgaagatgaagattggggtcttaacaagagaaagaaaagaagaactggttcaactggtgttgggactaattccgtagagggtcgatcagatgtcaaatccaataagaaagcccaacctcggagaaaacttttcaggattcctcctgcggcagttgaggtaacttggaatgtttattatctcaaaaaacatattatcagcattacatcttaattctatgatcgcgtatttgctgtaacacaaaacagaaagtcaattgatggtgaaattcactgatctactgtgcctgtagctgtgaccgtgtgtttttttcaggacacttgcttaatgcctcgtattattctctgttaaattaggtgctccgtaaagcttttgctgaaaatgagcttcctgcccggagtgtcaaagaaaatctctcaacagagctgggtatttcttttgaaaaggtttgttgtgttgtgttgaataatttatttcttacatatgttaattcacctggatattttgttttgctagtcaatttttggcagcactcaccagatcatactccgaagttcaattttcaaaatacagcaaacaatgtgtatgacttttaagttcagatgtatattttgtagttgatcaccttttccttctaatgtgatgggttcatctttgaagtatagaagtattaccaagtttgtctttgcggaatcaatgaactcattgaccaatgacaaatgtctgatctctttgcagattgataagtggttcaaaaatacacggtgtgctgctctcagggataggaaggcatgcatttcttatctcacatttattcatataatctgaatatttgttttcttgcatccgcatgcccccaaatgttccctctgggtttatctatacattccatgtgcccatgcaaacatttgaatatgttgcctgtaaaaaattgaagtcctaaaaatgtattagtagattcattatgtatgatagttactctgagtttgatgcatgatattcatcgactgaaattttgtctttcatgcattacattccttcactatggcaactttacaatctgttatttttaagttcctggcaacatctcacatagtgcccagggttttcgtaagttaaccgttggcattgtctttcagggtgaaagtcgttattctggtcccagcaaaaggtcaagaacaagcatagaaaaggctgaaacttcagctaaagtggatcaaatggacaactcatgctttcttcccttatctgaaataatcaacgtgcccacacgtctgcagaaaggtcttgataagaagccaaaatcaattaacagccctccaagacctcaggacaatgaaacttgcttgtcgccaactgataaaaccaaggtataaacagcaagcgctgataagggcttccacctgaaatagtttactccttttgaatccacccagttaattgtgtggtcttaacttgtctgcttaacttgtcttgtttgcaggagggtacaccgcctacgatcaagccttccatcacagattctagtcaactgatgaataacaacatcggcactgaggagactgctgtttcttgggtggacacttgggcctctgacgctctgcatttcttggacgtgagcgatgatgaacatttcttcgatgtgatcgagaaggtgtgcggtctcgagaatcggctgcagcggttgaaggagaacatgctatcatcgtcatcgtcaactgacaacaatgtggctgctgagagtggcttgcaaaacgaagttgtgcttgtaccagctgctgagctcaaggataaagcatcttaaccttgcatctgggtcccaatgctttgcttcagttgaccatttgctcataggattttatacatcagaaaatagtacaggaggggctggagtgtagcttgccccgtttatctttgaacttatataccggtgaactggtaccattctatatagggagggacagataattcggattaggttcgtgaggatttgcaaagagttagtttaactgtaatctttcagctggaactttgttcagcgagtaataggtcatggacaattacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0147800, RefSeq:Os02g0147800