Os02g0148500

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Revision as of 02:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0148500| Description = Similar to TIMING OF CAB 1 (Fragment)| Version = NM_001052427.1 GI:115444224 GeneID:4328300| Length = 3720 bp| Defi...")
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Gene Name

Os02g0148500

Description

Similar to TIMING OF CAB 1 (Fragment)

Version

NM_001052427.1 GI:115444224 GeneID:4328300

Length

3720 bp

Definition

Oryza sativa Japonica Group Os02g0148500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2664440..2668159

Sequence Coding Region

2664488..2664862,2664973..2665059,2665155..2665267,2665506..2665634,2666688..2666793
,2667296..2667367,2667702..2667806

Expression

GEO Profiles:Os02g0148500

Genome Context

<gbrowseImage1> name=NC_008395:2664440..2668159 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2664440..2668159 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcggccaccacgaagctaagccctaccagccccgccgcggcccggctcccgccgacgaggaggccgcccccgccgctgcggcggacgaggcggaggcggaggcggaggtggaggctatggagcggtacgagcaggagcaggagtacgaggagggggaggagggggaggaggaggagtacgagggcggggagggggtccccatggacgccgacgcctccgccgcggccgtggcggggatggacccgcacggggagatggtgcccgtggccggcggggaggcgggcggcggctacccgcacgtggcgtcgaacaccctcacgctgtcgttccagggcgaggtctacgtcttcgagtccgtttccgccgagagggtgcaagctgtgctgttactgcttggaggaagagagctagcaccagggtcgggttcggtaccatcatcttcagcggcatacagtaagaagatgaattttcctcaccggatggcatcattgatgaggttccgggaaaagagaaaagagagaaactttgataagaagatccggtatactgttaggaaggaagttgcacttaggatgcagcgtaatagaggccagtttacatcatcaaaatcgaaggctgaagaagcaacatccgtcataactagttcggaaggttcgccaaattggggcgcagttgaaggtcgacctccatcagctgctgagtgccatcattgtggtattagtgcagcgtcaacacctatgatgcgccgtggtcctgatggcccaagaacattgtgcaatgcatgtggacttatgtgggcaaacaagggtacgatgagagaggtaacaaaaggtccccctgtgcccttgcaaattgtgccagctgcaaccaatgatgttcagaacggaatcgtcgaggcaacaggtgtcgagcagcacaattctgcagtcgaggaggcagtttctgctgcaaatggccatgaatcgcagtcgggagtcgcgtga</cdnaseq>

Protein Sequence

<aaseq>MSGHHEAKPYQPRRGPAPADEEAAPAAAADEAEAEAEVEAMERY EQEQEYEEGEEGEEEEYEGGEGVPMDADASAAAVAGMDPHGEMVPVAGGEAGGGYPHV ASNTLTLSFQGEVYVFESVSAERVQAVLLLLGGRELAPGSGSVPSSSAAYSKKMNFPH RMASLMRFREKRKERNFDKKIRYTVRKEVALRMQRNRGQFTSSKSKAEEATSVITSSE GSPNWGAVEGRPPSAAECHHCGISAASTPMMRRGPDGPRTLCNACGLMWANKGTMREV TKGPPVPLQIVPAATNDVQNGIVEATGVEQHNSAVEEAVSAANGHESQSGVA</aaseq>

Gene Sequence

<dnaseqindica>49..423#534..620#716..828#1067..1195#2249..2354#2857..2928#3263..3367#agggtttggtctcgcctccatccccatcgtccgatccgatcccccgccatgagcggccaccacgaagctaagccctaccagccccgccgcggcccggctcccgccgacgaggaggccgcccccgccgctgcggcggacgaggcggaggcggaggcggaggtggaggctatggagcggtacgagcaggagcaggagtacgaggagggggaggagggggaggaggaggagtacgagggcggggagggggtccccatggacgccgacgcctccgccgcggccgtggcggggatggacccgcacggggagatggtgcccgtggccggcggggaggcgggcggcggctacccgcacgtggcgtcgaacaccctcacgctgtcgttccagggcgaggtctacgtcttcgagtccgtttccgccgagagggtgctgtgcctgcgccgctcatccatgatttcagtttttttttgtgtgtgttttgcgcacctgaattgctcggtgaatcggtgatgagtttgaattacttgtgttggcaggtgcaagctgtgctgttactgcttggaggaagagagctagcaccagggtcgggttcggtaccatcatcttcagcggcatacagtaaggtgaagtcatcgctgggcgaattatggtgattgccagttgagactattttaaattgtaatggtgcttatgtgactgtgtgtactctcttatgcagaagatgaattttcctcaccggatggcatcattgatgaggttccgggaaaagagaaaagagagaaactttgataagaagatccggtatactgttaggaaggaagttgcacttaggttagttagactagccttttaatatagccttcttttccctgtctatattctagagtatttgttatgttgtgtatttagtgttagcttattaatataatccattttctctgtttaatattatgaagttttcttatggtggatgaacttgttattgcatttgattttgtatatttggcaatgtgaattttcctttttaagttttatgagatagtagtaattattttctatacatttacaggatgcagcgtaatagaggccagtttacatcatcaaaatcgaaggctgaagaagcaacatccgtcataactagttcggaaggttcgccaaattggggcgcagttgaaggtcgacctccatcagctgctgagtatgtattcaaactattgtacttattatatctttatatgttcatacttcccattagtattatataaatgcatgaaaatcattacaaccatatttatatgagggatggccatttctttatgtagtaaataagtgtgccattcatggatcctgatttcccacctgggcaactgaattgtgttgtttcgaaaattcatccataattgggaaatatattcaatatgctccaattataagaaaatcagtttccattgcaacacatgggtgcactgctaggtatatctttgacctagtaaggatgcattatctcatgctcgcactgtccacagggacattgggctatcatacagagactttgtcgttttctctcagtcaccaacccaacctccaccatgtgccatgcagcatgcacgcacgtcgctggagctagctagctagccattttttaattgaacacttctgggtagtgagaactgtgaagccttgaatcaagcctttaactcagtttgatatttgaaaatttacagcacaactatcctgcatatatttcaattgtagttgggtgcaaaaaataaatcaaaatgcatgggaaacctccagcggaaaatggatcaatgtatacatctttctagttcctgataaaaaaaatgtagcatcaatttctgtaccaggcaaggtagaagcacgtgattctaaatcttgactattcaaggtgtttgccatgtggcgaatgtgacactgcactttcgtactgtagaaggtcatgcagcataaaattaaaaatttcgaaatgagaattgtctgacttgcatcattcactgcttaccagatctagctcttccatttcagacaggtttttgctatttggctgttgataactaaaaaatgatagttggtcttgatcaattgtttgccacccacatgataatagatgcctcttgcctcttgcacctgttgcttgtatatttgccttatattttctagcttcttttgcttcagaatttgaaacttagttcttgttgtgagagttactttccatgcacaattctttcaggtgccatcattgtggtattagtgcagcgtcaacacctatgatgcgccgtggtcctgatggcccaagaacattgtgcaatgcatgtggacttatgtgggcaaacaaggtacttccaatctttattgcactgcaccagtatctttctatacattggtgctaattgcaacttctagaataggctgtatgttgtttgcataacctttgttgcatcgagggtgtctccttcaatattaatataatgaacaatttttgcctttctagagcccaggtactgtaaaatttccccttttaccatatgctaagtttggtggtaaaagttatactgttctagcttgattgttgtagctctcagggtggatcttttgtgtgatctgttgagtgtccaatgcatcccaaatcacagttcacatgtatggtcccatcgtgaaagttggaacaccagtaaacagtcatggaaattgtaacgtccccacccaaaacctccattaccccagtggttcagtgttggttttaagttcttagcttgcagacaagttgcatttagcgtttttagggtcagtcttggtgttattgacaatattctgctccaatttgttcgtatttcgtagggtacgatgagagaggtaacaaaaggtccccctgtgcccttgcaaattgtgccagctgcaaccaatgatgttgtaagtcactatgtttgcacttcattcattcagaattttagattgcaaattttatttatagatttacccctcatccttttctaactcaaatttagcgttgtgtaaaaccattgtttgggcctgatgaaattggcattagagtgtaagacatatggactgatgaaatgcatccttagggtgcacttgttctttctttataggatgaggatttgtgacttgtgagcacgaaacaatcatgtattgcagtttctagaaaaaataactgttctagagcagtgaattttaaactgggtcagtagtcttactcaaaatgtgaattacccgtgtttttcagcagaacggaatcgtcgaggcaacaggtgtcgagcagcacaattctgcagtcgaggaggcagtttctgctgcaaatggccatgaatcgcagtcgggagtcgcgtgatgcttgagggttcagacttgagaaaaaggaggaggatgcgtatcaatcaacaatcaagtagtcatggtgctcaacaagttaaccggatgtatgatatgaccggctctaggattcatgtggttctgcaatgccggtctctccgagatgatatatgcttgtggccggctttttctatgcttgtatttgagttttatagctttgcctttggcagtagataaatggacgagttcagcttgagcgcatgtgacatattttgcattttactctcttgtcagatgtaatcgttgatttacaggtgacactgggcaagcaggcaggttaatttcacaatcgcagcatcagtgcattgtctg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0148500, RefSeq:Os02g0148500