Os02g0152800

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Gene Name

Os02g0152800

Description

RNA polymerase Rpb1, domain 1 containing protein

Version

NM_001052456.1 GI:115444282 GeneID:4328330

Length

5445 bp

Definition

Oryza sativa Japonica Group Os02g0152800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2913663..2919107

Sequence Coding Region

2913663..2914257,2915084..2915239,2915328..2915486,2915581..2915751,2916417..2916473
,2916565..2916680,2916790..2916916,2917862..2917945

Expression

GEO Profiles:Os02g0152800

Genome Context

<gbrowseImage1> name=NC_008395:2913663..2919107 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2913663..2919107 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggaccagtcagcaattccggttgctgaaggtgccatcaagagcatcaagcttagcctatccactgaggatgagattcgtacttattctataaatgactgtcctgtcactcatcctagtcagctcggaaatcccttccttgggttacctttggagacaggaaaatgcgagtcctgtggtgcctcagaaaatggaaaatgcgaagggcatttcgggtacattgagctgcctgtgcctatatatcacccttgccatgtaacggaactgaggcagatattaaatgtggtatgtttgaaatgcctccgcgtcaagaaaggaaaggtcaaacagacagagggaaaggataacacatcagcattgtcatgctactattgtcgggatcttccggcattatctttgaaagaaatcaaaacagcagatggtgcatttcgtttagagttgaaaatgcctcctaggaaattcatgacagaaggctcatggaacttccttgacaagtatggatttcaccatggtggaacctcccactgcaggaccttgctcccggaagaggctctcaatatattgaagaaaattcctgaagaaacgaagaggaaactagctgctcgtggttacattgctcaatctggatatgtgatgaaatacctccccgtgccaccaaattgtttatacattccagaatttacagatgggcagagcatcatgtcctatgacatatcaatatctctgctgaagaaggtgcttcagaaaatagagcagataaaaaagtcaagagctggatccccaaactttgaatcacatgaagttgaatcatgtgatctacagctctctattgcccagtacatacatctaaggggcactacaaggggtcctcaagacaacaccaagagatttgcaatcagtactgatccttctgcgttatcaacaaaacaatggctggagaagatgagaacattatttatcagcaaagggtcagggttttcatcacgcagtgtacttactggagatccatatattggagtagatgtgattggactgccttctgaagtggcaaaaagaatcactttcgaagagcaggtaacagacatcaaccttaacaggttgcaagagattgtggataagggattgtgtttgacctacagagatggccaggcaacctatgccatcaccgttggatccaaaggtcacactaccctgaaagtcggacagactatcagtaggagaattgttgatggggatgttgttttccttaaccgtccacccagtacccacaagcattccctccaggcatttcgcgtgtatgtccatgaagaccatacggtcaagatcaatccgctcatatgcgcaccttttgcagcggactttgacggtgattgtgtgcacatctattatccacagtcccttgctgcaaaagctgaagcactggagcttttcagtgtggagaagcagcttaccagttcgc</cdnaseq>

Protein Sequence

<aaseq>MEEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQL GNPFLGLPLETGKCESCGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKC LRVKKGKVKQTEGKDNTSALSCYYCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEG SWNFLDKYGFHHGGTSHCRTLLPEEALNILKKIPEETKRKLAARGYIAQSGYVMKYLP VPPNCLYIPEFTDGQSIMSYDISISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQ LSIAQYIHLRGTTRGPQDNTKRFAISTDPSALSTKQWLEKMRTLFISKGSGFSSRSVL TGDPYIGVDVIGLPSEVAKRITFEEQVTDINLNRLQEIVDKGLCLTYRDGQATYAITV GSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQAFRVYVHEDHTVKINPLICA PFAADFDGDCVHIYYPQSLAAKAEALELFSVEKQLTSS</aaseq>

Gene Sequence

<dnaseqindica>4851..5445#3869..4024#3622..3780#3357..3527#2635..2691#2428..2543#2192..2318#1163..1246#gctctcgcactcgcactcgcgctcgtgtgggttcccttctcggcttctccgaggcgagggcttggctgcaggctaaaaccctctccgcccccaccccccgcgcggtggctagggttttagggcgagggtgggaggaggcaggcaggcgcgcgcgcgcgcgcgggtgttcaggtgagggggaggagggctctgatcccgtctccgcaatgtggggggcgctgggttactcgcagaaatggggggaaaggggatgtggttggttgtttgtctgttcatcgtcgcttgttgtggggggtttgggtttccccgagggaagggaagatttgggtcgtgcggagaggcgtgggttattcaattttggtgcactttgatatgcctttttgtttcccaactaaggggttctatctcatgtatgataaatgttcaccggagtaatccgtgtgggtttggggggaagtttgtggtgtgctgggaatctaaacgaatcctgatgattgtgcgaaatgtttttttagttaggggaggggaggggatcctggtgagcatccgcatcctctttctgatgattcatctctcactctaccacctggagtgcttttgtgtggaatttgctcgcgttcgttcgttaaccctagcttctcttctagatctggaagaagctctttctcttaatttcagagccttaaccttgatacaagtaacagtttgtttgtacttttggatcttcccctgttgttgggtgtacttttggtgggtcgtagtaggatgctagagctaagatgaaacagaaggaaatgcagcttcagcggtaggagtaacctaatattagcttagccactttgccctaattaacttgcttggagacaagggcacactctctaagggaatatatttgttagtgcacccattaggaaaaggaaacaaatgattaaaatcaaaagcaagtttgatttggagtggtattttccgagaagccaacaaataattacagcggtttttatcctacgtttgcgaatttgaggttgctgttttctgtttgtttctgctatttcttgttgtttaattggagctaatggtgggttctagcttgttggtattaccggttctttcttttcaattctttttacggacacagccatgtccctttgtctatttcagatagatggaggaggaccagtcagcaattccggttgctgaaggtgccatcaagagcatcaagcttagcctatccactgaggatgagattgtaagttctccttctctgatgctttttaccagcaatgcttgcagaaagagatgcatgcagaagcgacaacttggtcattgtgatccattagagacagtaccgtctgataagggagcatatgattgatgtaactactcttgatgatgagatctagaaaccctccttttctctatcatttatatttgatatcatttgcgaatggacctctagctgagttggttaggtggctctagtagcactcctcaggtcctgggttcgactccttgtgggagcgaatttcaggctggggttgaaaaaaaatcccctcgtttgtcccacgccaaagcataggtctaaggaccagcctattttcacgggttacggtgctgctgtgtaagggtggggcaagggttcgggggttttcttgacctgcctgtgccgctgtgtaaggggggttagggggttttcttgacatgcgtgagaaggtcttaccctccctcccccgtcaggtcaagttttatatttgatatcattcaattagatttacctatgatgcatgatctgtgctattcaatcgcaatgcaaaatttgaatttgtaagattaattttatcaagatgagtgttgctatgagagcttttctttttgacctttacttttgcaatgtaaagatgaatgttgtttgttagttaatactgaaatctgacattttcttttgcatctggaagtgctgatacatgggctttttcgctaactaacggagctgttttacattttgtggatttaaatacttgatgttgcattcttctacttgattcatatgaatttagccttctttttttttgtattttttgtttctcatgaatatggcaaggatatatcctgcacagttcccatttatatttcctactgtaatactatgttttttatttccaacatgactgatacacacctttctgtcctgcagcgtacttattctataaatgactgtcctgtcactcatcctagtcagctcggaaatcccttccttgggttacctttggagacaggaaaatgcgagtcctgtggtgcctcagaaaatggaaaatgcgaaggttctcacatgatgacttctcattagtttttcatgcccaagatattgttctgtagcaactgacaatccacttttctcttctttaaaaccaaaattatctgcttatttagggcatttcgggtacattgagctgcctgtgcctatatatcacccttgccatgtaacggaactgaggcagatattaaatgtggtatgtttgaaatgcctccgcgtcaagaaaggaaaggtacatacaggtcaaagcagctaagtcttaattttctaaatccaattgtcttactttggcttataattaatgtgatcttaccatgtatcaggtcaaacagacagagggaaaggataacacatcagcattgtcatgctactattgtcgggtactttccaaccccaacaattttgtatatcccttctgccttgaagtagacagacataatatttcattgtttgacatgtataagtagtaggaatatggaacatatgcctctcgaagaaccaagtataccagtgttttaagtttaatccactcatacatagtccggatgttacagcttagttggttttaaattgatcaaaatctgcttgggcaaaacatagccaatgttactgacatagctgttgcagtattcactcagtaatcctatccatacatatgctttcacttatatattaagttacggaataagttttatgttgcattcttttgcaataaaaccattgattgcaaagtttttttgtctacacagagaatgagtgacagactagcactgtattcagttttatgtttgttcagtaacatgtcgtcgttgaaaacagtacacaggatcaaagttatgctgtatgatggagtgttattggaacttgtaagatgtggccaacaatcatgacataagcattactatatcatgtttttattagttttttagcgtatggcttttggtatacagctttagttgtttttattagatgctagccttgacactataaacatttacaatccggatgagtggcaactgatgttcatcgccatttacttctttaggatcttccggcattatctttgaaagaaatcaaaacagcagatggtgcatttcgtttagagttgaaaatgcctcctaggaaattcatgacagaaggctcatggaacttccttgacaagtatggatttcaccatggtggaacctcccactgcaggaccttgctcccggaagaggttaatctcatttactttatttttatgacttctgtaagctcctaaatatccaacaacctacatgatcgtctgtcattcctgtatcgtttgctaggctctcaatatattgaagaaaattcctgaagaaacgaagaggaaactagctgctcgtggttacattgctcaatctggatatgtgatgaaatacctccccgtgccaccaaattgtttatacattccagaatttacagatgggcagagcatcatgtcctatgtgagttcttcctcacgtttgttcttcataattttcctgactggttcaattctatgtcatggcttattatacttgcttctcatatcaggacatatcaatatctctgctgaagaaggtgcttcagaaaatagagcagataaaaaagtcaagagctggatccccaaactttgaatcacatgaagttgaatcatgtgatctacagctctctattgcccagtacatacatctaaggggcactacaagggtatgttgcatgatcttaatgtgatagtttatttaccatatttacatgagagcatgttcaggagagtcctgtctcagctagagaattgctccagagagtagctcatctgctcacacacaaattggtcacttgttttgtaatcgtaattgtcaccaagccatgaattaggatcgactagttgtcaactgcatttgcacaggctgtcgacttaagctcatttttacaacaatttcaatactccttatagtaaccaaactaaaaatatgaatttacatttgacttcatattaatataattataatgactgagcacatgcatacaagggattttgattcataaatctctcagaagatagcaacaaatgaccaagcatatccatatgggttgggttgatcttgtgtcgggttgatcctgtgcatgagtatacactgtggatggttatcattgaggatgaacggtctgctattgtgcgtctatgtgcaccctttattagagaaaacagccatgcaaaccatgcatgcattgtcagtgaattcataatttcatattgcataggacgtccgtcatgatcatagacacactaagcaaaactgctcatttccctacattaactatattatcgaactcccttatagctattaaacccgaaactacaacatttctatagtagttggacctgaaaaggttcatgaaattcatcaactattagttcatgttaaagctttcttccataggtttatgttttacaaccgttctctcccagtagttgtgtgcaatcacttatttagtcttgtttcttttgtcccacggtaatgttgtcttgcagggtcctcaagacaacaccaagagatttgcaatcagtactgatccttctgcgttatcaacaaaacaatggctggagaagatgagaacattatttatcagcaaagggtcagggttttcatcacgcagtgtacttactggagatccatatattggagtagatgtgattggactgccttctgaagtggcaaaaagaatcactttcgaagagcaggtaacagacatcaaccttaacaggttgcaagagattgtggataagggattgtgtttgacctacagagatggccaggcaacctatgccatcaccgttggatccaaaggtcacactaccctgaaagtcggacagactatcagtaggagaattgttgatggggatgttgttttccttaaccgtccacccagtacccacaagcattccctccaggcatttcgcgtgtatgtccatgaagaccatacggtcaagatcaatccgctcatatgcgcaccttttgcagcggactttgacggtgattgtgtgcacatctattatccacagtcccttgctgcaaaagctgaagcactggagcttttcagtgtggagaagcagcttaccagttcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0152800, RefSeq:Os02g0152800