Os02g0153500

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Revision as of 02:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0153500| Description = Protein kinase-like domain containing protein| Version = NM_001185878.1 GI:297720888 GeneID:9266791| Length = 3633 b...")
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Gene Name

Os02g0153500

Description

Protein kinase-like domain containing protein

Version

NM_001185878.1 GI:297720888 GeneID:9266791

Length

3633 bp

Definition

Oryza sativa Japonica Group Os02g0153500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2952132..2955764

Sequence Coding Region

2952434..2955583

Expression

GEO Profiles:Os02g0153500

Genome Context

<gbrowseImage1> name=NC_008395:2952132..2955764 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2952132..2955764 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacccacttcattctccgtgcaagaaacacagcaacaaatttcccatacctgttcttgcccttgccctggtgctgctcatcaacctcgcctctctcaccagttcatgtacagagcaggacaggagctccctcctcaggttcctcagggagctctctcaagatggcggcctcgctgcgtcatggcaggatggtacagattgctgcaaatgggatgggatcacctgcagccaagatagcacggtcactgatgtttccctggcctctaggagcctccagggacgcatctcaccgtctcttggtaatctccctggattgctgcgcctcaacttgtctcacaacctgctgtctggtgccctgccgaaggaactgttgtcttccagcagtctcatcaccattgacgtcagctttaaccgcctggatggagatcttgacgagttgccatcttcaacacctgcaaggccactgcaggtactgaatatctcaagtaatttgttagcaggacagtttccatcatccacatgggtagtgatgaaaaatatggttgcactcaatgtcagtaacaacagctttagtgggcatataccagctaatttctgcaccaactcgccatacttatctgtgcttgaactcagttataaccaattaagtgggagcattccccctggatttggaagttgctccaggctcagagtcctcaaggctggccacaacaaccttagtgggactatccctgatgaaatcttcaatgctacctcgttagagtgcctctcttttccaaacaatgattttcaagggacacttgaatgggcaaatgttgtcaaactcagtaagctggctacccttgacctcggagagaacaacttcagtggtaacatttcagagtctataggtcagctcaacagattggaggaactccatctgaacaacaacaaaatgtttgggagcataccatcaaacttgagtaactgcacaagtctgaaaatcatcgacctcaataacaacaatttcagtggagagctcatctatgtcaatttctccaacttacccaatctaaaaactttagatcttatgcggaacaacttcagtggtgaaattccagaaagcatatacacatgcagcaacctaactgctctgcgggtatcttccaataagctgcacggccagttatcaaagggactaggcaatctgaaatccctctccttcctgtcactcgcaggaaactgtcttacaaacatagcaaatgcacttcagatattaagcagctccagcaacctcaccacccttcttattggccacaacttcatgaatgaaagaatgcctgatggcagtattgatggttttgagaatcttcaggttctatccctaagtgaatgctcattatctggaaaaatacctcgatggctatcgaaactctcaaggttggaggtgctagagttagacaacaatcgactaactggaccaataccagactggatcagtagcctaaacttcctcttctatctagatatatcaaataacagcctgacaggagaaattccgatgtccttattacagatgccaatgctaaggtcagacagggctgcagcacagttggaccgtagagcatttcaattacccatatatatatctgcatcactacttcaataccgcaaggccagtgcttttcccaaagtgctcaatctaggcaaaaatgaattcaccggtttgatccccccagagattggtctgttgaaagtgctcctttcactgaatttgagctttaacaaattatatggagatatcccccagtcgatctgcaacctcacagatctgcttgtgctggatttgtcaagcaacaatctaactggtacaatcccagctgcgctgaacaatctaaacttcctttccgaattcaacatctcatacaatgacctagaagggcctatcccaactggtggtcagcttgatacattcacaaattctagcttttatggcaatccaaagctgtgtggtcctatgcttgtacgccattgcagttcagctgatggacatttgatctcaaagaaacaacaaaacaagaaggtcatacttgcaattgtttttggtgtcttctttggagccattgtcattcttatgttgtcagggtatctcctttggtcgatcagtggtatgagtttcaggaccaaaaataggtgcagcaatgattacacggaagcattatcatccaacatcagttcagagcatttgttagtaatgttgcagcaaggcaaggaagcagaagacaagatcacattcactggcattatggaagctacaaataattttaacagggagcacatcattggatgcggaggttatggattagtctacagggcagagctacctgatggctcaaaacttgccataaagaagctcaatggtgaaatgtgcctgatggaaagggagttcagtgcagaggttgaaacgctctccatggcacaacatgacaatcttgtgccactcttgggttactgtatccagggaaactcgaggctcctcatatattcttacatggagaatggcagtctggatgattggcttcataacaaggacgatggtaccagcacaattctagattggccaagacggctcaaaatagcgaaaggagcaagccacggcctttcttacatccacaatatctgcaagcctcgtattgtccaccgtgacatcaaatctagcaacatccttctcgacaaagaattcaaagcttatattgcagattttggattatcacggttgatccttcccaacaaaactcatgtcacaaccgagctagtcggcactctcggttacatcccccctgagtatgggcaagcatgggttgctacattgaaaggtgacgtgtacagtttcggagtggtcctgcttgagcttctcactgggaggaggccagttccaatactatctacttcaaaggaacttgtcccatgggtacaggagatgatatcagagggaaagcagattgaggtgctggattcaacacttcaaggcacagggtgtgaagagcaaatgctaaaggtccttgaaactgcttgcaagtgcgttgatggtaatcctttgatgaggccaactatgatggaagtagtagccagtctggacagtatagaccctgacctaaagatgcaataa</cdnaseq>

Protein Sequence

<aaseq>MHPLHSPCKKHSNKFPIPVLALALVLLINLASLTSSCTEQDRSS LLRFLRELSQDGGLAASWQDGTDCCKWDGITCSQDSTVTDVSLASRSLQGRISPSLGN LPGLLRLNLSHNLLSGALPKELLSSSSLITIDVSFNRLDGDLDELPSSTPARPLQVLN ISSNLLAGQFPSSTWVVMKNMVALNVSNNSFSGHIPANFCTNSPYLSVLELSYNQLSG SIPPGFGSCSRLRVLKAGHNNLSGTIPDEIFNATSLECLSFPNNDFQGTLEWANVVKL SKLATLDLGENNFSGNISESIGQLNRLEELHLNNNKMFGSIPSNLSNCTSLKIIDLNN NNFSGELIYVNFSNLPNLKTLDLMRNNFSGEIPESIYTCSNLTALRVSSNKLHGQLSK GLGNLKSLSFLSLAGNCLTNIANALQILSSSSNLTTLLIGHNFMNERMPDGSIDGFEN LQVLSLSECSLSGKIPRWLSKLSRLEVLELDNNRLTGPIPDWISSLNFLFYLDISNNS LTGEIPMSLLQMPMLRSDRAAAQLDRRAFQLPIYISASLLQYRKASAFPKVLNLGKNE FTGLIPPEIGLLKVLLSLNLSFNKLYGDIPQSICNLTDLLVLDLSSNNLTGTIPAALN NLNFLSEFNISYNDLEGPIPTGGQLDTFTNSSFYGNPKLCGPMLVRHCSSADGHLISK KQQNKKVILAIVFGVFFGAIVILMLSGYLLWSISGMSFRTKNRCSNDYTEALSSNISS EHLLVMLQQGKEAEDKITFTGIMEATNNFNREHIIGCGGYGLVYRAELPDGSKLAIKK LNGEMCLMEREFSAEVETLSMAQHDNLVPLLGYCIQGNSRLLIYSYMENGSLDDWLHN KDDGTSTILDWPRRLKIAKGASHGLSYIHNICKPRIVHRDIKSSNILLDKEFKAYIAD FGLSRLILPNKTHVTTELVGTLGYIPPEYGQAWVATLKGDVYSFGVVLLELLTGRRPV PILSTSKELVPWVQEMISEGKQIEVLDSTLQGTGCEEQMLKVLETACKCVDGNPLMRP TMMEVVASLDSIDPDLKMQ</aaseq>

Gene Sequence

<dnaseqindica>182..3331#ctaggtatgaccatctgatgcattccccaagtcagagaaggccaaaataaaatggaaccaatagacactctttcttactcctgatgctctttcttgatataaccatctgatgcttttcccagtgaagatacttagatacaaactcagcatcaagtttccatgctagattcacaagaaaaccatgcacccacttcattctccgtgcaagaaacacagcaacaaatttcccatacctgttcttgcccttgccctggtgctgctcatcaacctcgcctctctcaccagttcatgtacagagcaggacaggagctccctcctcaggttcctcagggagctctctcaagatggcggcctcgctgcgtcatggcaggatggtacagattgctgcaaatgggatgggatcacctgcagccaagatagcacggtcactgatgtttccctggcctctaggagcctccagggacgcatctcaccgtctcttggtaatctccctggattgctgcgcctcaacttgtctcacaacctgctgtctggtgccctgccgaaggaactgttgtcttccagcagtctcatcaccattgacgtcagctttaaccgcctggatggagatcttgacgagttgccatcttcaacacctgcaaggccactgcaggtactgaatatctcaagtaatttgttagcaggacagtttccatcatccacatgggtagtgatgaaaaatatggttgcactcaatgtcagtaacaacagctttagtgggcatataccagctaatttctgcaccaactcgccatacttatctgtgcttgaactcagttataaccaattaagtgggagcattccccctggatttggaagttgctccaggctcagagtcctcaaggctggccacaacaaccttagtgggactatccctgatgaaatcttcaatgctacctcgttagagtgcctctcttttccaaacaatgattttcaagggacacttgaatgggcaaatgttgtcaaactcagtaagctggctacccttgacctcggagagaacaacttcagtggtaacatttcagagtctataggtcagctcaacagattggaggaactccatctgaacaacaacaaaatgtttgggagcataccatcaaacttgagtaactgcacaagtctgaaaatcatcgacctcaataacaacaatttcagtggagagctcatctatgtcaatttctccaacttacccaatctaaaaactttagatcttatgcggaacaacttcagtggtgaaattccagaaagcatatacacatgcagcaacctaactgctctgcgggtatcttccaataagctgcacggccagttatcaaagggactaggcaatctgaaatccctctccttcctgtcactcgcaggaaactgtcttacaaacatagcaaatgcacttcagatattaagcagctccagcaacctcaccacccttcttattggccacaacttcatgaatgaaagaatgcctgatggcagtattgatggttttgagaatcttcaggttctatccctaagtgaatgctcattatctggaaaaatacctcgatggctatcgaaactctcaaggttggaggtgctagagttagacaacaatcgactaactggaccaataccagactggatcagtagcctaaacttcctcttctatctagatatatcaaataacagcctgacaggagaaattccgatgtccttattacagatgccaatgctaaggtcagacagggctgcagcacagttggaccgtagagcatttcaattacccatatatatatctgcatcactacttcaataccgcaaggccagtgcttttcccaaagtgctcaatctaggcaaaaatgaattcaccggtttgatccccccagagattggtctgttgaaagtgctcctttcactgaatttgagctttaacaaattatatggagatatcccccagtcgatctgcaacctcacagatctgcttgtgctggatttgtcaagcaacaatctaactggtacaatcccagctgcgctgaacaatctaaacttcctttccgaattcaacatctcatacaatgacctagaagggcctatcccaactggtggtcagcttgatacattcacaaattctagcttttatggcaatccaaagctgtgtggtcctatgcttgtacgccattgcagttcagctgatggacatttgatctcaaagaaacaacaaaacaagaaggtcatacttgcaattgtttttggtgtcttctttggagccattgtcattcttatgttgtcagggtatctcctttggtcgatcagtggtatgagtttcaggaccaaaaataggtgcagcaatgattacacggaagcattatcatccaacatcagttcagagcatttgttagtaatgttgcagcaaggcaaggaagcagaagacaagatcacattcactggcattatggaagctacaaataattttaacagggagcacatcattggatgcggaggttatggattagtctacagggcagagctacctgatggctcaaaacttgccataaagaagctcaatggtgaaatgtgcctgatggaaagggagttcagtgcagaggttgaaacgctctccatggcacaacatgacaatcttgtgccactcttgggttactgtatccagggaaactcgaggctcctcatatattcttacatggagaatggcagtctggatgattggcttcataacaaggacgatggtaccagcacaattctagattggccaagacggctcaaaatagcgaaaggagcaagccacggcctttcttacatccacaatatctgcaagcctcgtattgtccaccgtgacatcaaatctagcaacatccttctcgacaaagaattcaaagcttatattgcagattttggattatcacggttgatccttcccaacaaaactcatgtcacaaccgagctagtcggcactctcggttacatcccccctgagtatgggcaagcatgggttgctacattgaaaggtgacgtgtacagtttcggagtggtcctgcttgagcttctcactgggaggaggccagttccaatactatctacttcaaaggaacttgtcccatgggtacaggagatgatatcagagggaaagcagattgaggtgctggattcaacacttcaaggcacagggtgtgaagagcaaatgctaaaggtccttgaaactgcttgcaagtgcgttgatggtaatcctttgatgaggccaactatgatggaagtagtagccagtctggacagtatagaccctgacctaaagatgcaataatatgatagataatcttgtactttaagtgaacagagttgatctggtttcactagaactagaatttgattgatcttatagttcgttctgtacagcgtgtgacaggctagtgtgattttgaggcatttcccttttttactgtacttgtttttacattagaaagtgggtatgtaatgcgtcttcctttccctgtttattaaacattgttcattctcaggttgcacaggcatgaaaaaaggtcgaaacaagtgaggaaattgttatgttccttgagtttttcaatgcaaaaatcaaaatggttccca</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0153500, RefSeq:Os02g0153500