Os02g0154000

From RiceWiki
Revision as of 02:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0154000| Description = Protein kinase-like domain containing protein| Version = NM_001052466.1 GI:115444302 GeneID:4328340| Length = 3141 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0154000

Description

Protein kinase-like domain containing protein

Version

NM_001052466.1 GI:115444302 GeneID:4328340

Length

3141 bp

Definition

Oryza sativa Japonica Group Os02g0154000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2972240..2975380

Sequence Coding Region

2972240..2975380

Expression

GEO Profiles:Os02g0154000

Genome Context

<gbrowseImage1> name=NC_008395:2972240..2975380 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2972240..2975380 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagccacctcattcttcatgcaagacacaaagcaacagatttcccatacctgttcttggtcttgcccttgtgctactgctcaacttcacctctcccaccagttcatgtacaaagcaagagaagagcaccctcctcaatttcctcacggggttttctcaggatgggggcctcagcatgtcatggaaggatggcatggattgttgcgaatgggaagggataaactgcagccaagataagaccgtgactgaagtttcattgccttccaggagcctcgaggggcacatctcaccatctcttggcaacctgactggattgttgcgcctcaatctgtcctacaacctgctatccggtgccataccgcaggaattagtgtcttccagaagtctcattgtcatcgacatcagctttaaccgcctgaatggaggtctcgatgagttgccatcttcaacccctgccaggccactgcaggtactaaacatctcaagcaatttgtttaaaggacagtttccatcctccacatggaaagtgatgaaaaatctggtcaaactcaatgtcagtaacaacagctttagtgggcatataccaactaatttctgcaccaactcaccatccttcgctgtgcttgagctcagttacaaccaattcagtgggggcgttccccctgaacttggaaattgctccatgctcagagtcctcaaggctggcaacaacaaccttagtgggactctcccagacgaactcttcaatgctacctcgttggactgcctctcttttcccaacaataatttagaaggaaacattggtagtacacctgtagtaaaactcagtaatgtggtagtacttgatcttggagggaacaacttcagtggcatgattccagatactataggtcagctcagtagattgcaggagctccatttggacaacaataacttgcatggtgagcttccatcggctttgggcaattgcaaatatctcacaaccatcaacctcaagagcaacagcttcagcggagatctaggcaaggtcaacttctccacattgcccaatctgaaaactttagatattgacatgaacaactttagtggtaaagttccagaaagcatctactcatgtagcaacttgattgcactgcggctctcgtataacaatttctacggtgagctgtcatcagaaataggcaagctgaagtacctctcgttcctatctttgagtaacaattcttttacaaatatcacaagagctcttcagatccttaagagctccacgaaccttaccaccctgtttattgcgtacaacttcatggaagaggtcattccacaggatgaaaccattgatggtttcgagaatctccaggctctctcagtagaccactgttcattatcaggaagaataccactttggctatcaaagctcacaaacttgaagttactatttttatccaacaatcaactaactggaccaataccagactggattagctcactaaaccgcctgttctatctggatatatcaaacaacagcctagcaggagaaatcccaattaccttgatggacatgccaatgataagaacaacccagaataagacctattcagagcctagtttctttgagctacctgtttatgatggtaaatttcttcaataccgtacacgtactgcttttccgacactgttgaatctaagcctaaacaagttcatgggtgtgatccccccacaaattggtcagttaaaaatgcttgtcgtacttgatttcagccacaacaatttatcaggacagatcccacaatcagtttgcagcctcacaagtctgcgagttctcgatttatccaataacaacctcacaggttcaattcctggtgaactgaatagcctgaacttcctttcagcattcaatgtttcaaacaatgaccttgaaggtcctattcccataggagctcagtttagtacatttccaaattccagctttgatggtaacccaaagctgtgtggctctatgctcactcacaaatgcaaatcagcagaagaagcctcagcatccaaaaaacagttgaacaaaagggtcattcttgcaatagtatttggggtgctttttggaggggccgcaattgttttgctattggcgcacttccttttctcgctcagggatgcaattcccaaaatcgaaaacaaaagcaacactagtggaaatctggaggccggttcgttcacctctgatccagagcatttgttggtaatgataccacgaggcagtggagaagcaaacaaactcacattcactgatctcatggaggctacagataacttccataaggagaatattatagcatgtggaggttatgggctagtgtacaaagctgagttacccagtggctccacactcgcaatcaagaagctcaatggagaaatgtgcctcatggaaagggagtttgcagcagaggttgaagccctatccatggcacagcatgacaatcttgtgcctttgtggggatactgcatccagggaaactcgaggctactcatatattcttacatggaaaatggtagcctggacgactggcttcataatagggatgacgaaaccagctcatttcttgactggccaacacgtttcaagattgcacgaggagcaagccagggtctttcgtatatccatgatgtctgcaagcctcacattgtccaccgtgacatcaagtccagcaacattctacttgacaaagaattcaaagcttatgtcgctgattttgggttgtcaagattgatccttccgaacaaaaaccacatcacaacagagctagtcggcactctaggttacatcccacctgagtatggacaaggatgggttgctaccttaagaggcgatgtgtacagttttggagtggtcctgcttgagctactcacaggaagacggcctgtttcaatcctctctacatcagaggaacttgttccatgggtactagaaatgaagtccaagggaaacatgcttgaggtcctggatccaacactccaaggcacagggaatgaagagcagatgctcaaggtgcttgaagttgcttgcaaatgtgtcaactgtaatccttgcatgcggccaactatcacagaggtagtttcctgcctggacagtgtaggctccgactga</cdnaseq>

Protein Sequence

<aaseq>MQPPHSSCKTQSNRFPIPVLGLALVLLLNFTSPTSSCTKQEKST LLNFLTGFSQDGGLSMSWKDGMDCCEWEGINCSQDKTVTEVSLPSRSLEGHISPSLGN LTGLLRLNLSYNLLSGAIPQELVSSRSLIVIDISFNRLNGGLDELPSSTPARPLQVLN ISSNLFKGQFPSSTWKVMKNLVKLNVSNNSFSGHIPTNFCTNSPSFAVLELSYNQFSG GVPPELGNCSMLRVLKAGNNNLSGTLPDELFNATSLDCLSFPNNNLEGNIGSTPVVKL SNVVVLDLGGNNFSGMIPDTIGQLSRLQELHLDNNNLHGELPSALGNCKYLTTINLKS NSFSGDLGKVNFSTLPNLKTLDIDMNNFSGKVPESIYSCSNLIALRLSYNNFYGELSS EIGKLKYLSFLSLSNNSFTNITRALQILKSSTNLTTLFIAYNFMEEVIPQDETIDGFE NLQALSVDHCSLSGRIPLWLSKLTNLKLLFLSNNQLTGPIPDWISSLNRLFYLDISNN SLAGEIPITLMDMPMIRTTQNKTYSEPSFFELPVYDGKFLQYRTRTAFPTLLNLSLNK FMGVIPPQIGQLKMLVVLDFSHNNLSGQIPQSVCSLTSLRVLDLSNNNLTGSIPGELN SLNFLSAFNVSNNDLEGPIPIGAQFSTFPNSSFDGNPKLCGSMLTHKCKSAEEASASK KQLNKRVILAIVFGVLFGGAAIVLLLAHFLFSLRDAIPKIENKSNTSGNLEAGSFTSD PEHLLVMIPRGSGEANKLTFTDLMEATDNFHKENIIACGGYGLVYKAELPSGSTLAIK KLNGEMCLMEREFAAEVEALSMAQHDNLVPLWGYCIQGNSRLLIYSYMENGSLDDWLH NRDDETSSFLDWPTRFKIARGASQGLSYIHDVCKPHIVHRDIKSSNILLDKEFKAYVA DFGLSRLILPNKNHITTELVGTLGYIPPEYGQGWVATLRGDVYSFGVVLLELLTGRRP VSILSTSEELVPWVLEMKSKGNMLEVLDPTLQGTGNEEQMLKVLEVACKCVNCNPCMR PTITEVVSCLDSVGSD</aaseq>

Gene Sequence

<dnaseqindica>1..3141#atgcagccacctcattcttcatgcaagacacaaagcaacagatttcccatacctgttcttggtcttgcccttgtgctactgctcaacttcacctctcccaccagttcatgtacaaagcaagagaagagcaccctcctcaatttcctcacggggttttctcaggatgggggcctcagcatgtcatggaaggatggcatggattgttgcgaatgggaagggataaactgcagccaagataagaccgtgactgaagtttcattgccttccaggagcctcgaggggcacatctcaccatctcttggcaacctgactggattgttgcgcctcaatctgtcctacaacctgctatccggtgccataccgcaggaattagtgtcttccagaagtctcattgtcatcgacatcagctttaaccgcctgaatggaggtctcgatgagttgccatcttcaacccctgccaggccactgcaggtactaaacatctcaagcaatttgtttaaaggacagtttccatcctccacatggaaagtgatgaaaaatctggtcaaactcaatgtcagtaacaacagctttagtgggcatataccaactaatttctgcaccaactcaccatccttcgctgtgcttgagctcagttacaaccaattcagtgggggcgttccccctgaacttggaaattgctccatgctcagagtcctcaaggctggcaacaacaaccttagtgggactctcccagacgaactcttcaatgctacctcgttggactgcctctcttttcccaacaataatttagaaggaaacattggtagtacacctgtagtaaaactcagtaatgtggtagtacttgatcttggagggaacaacttcagtggcatgattccagatactataggtcagctcagtagattgcaggagctccatttggacaacaataacttgcatggtgagcttccatcggctttgggcaattgcaaatatctcacaaccatcaacctcaagagcaacagcttcagcggagatctaggcaaggtcaacttctccacattgcccaatctgaaaactttagatattgacatgaacaactttagtggtaaagttccagaaagcatctactcatgtagcaacttgattgcactgcggctctcgtataacaatttctacggtgagctgtcatcagaaataggcaagctgaagtacctctcgttcctatctttgagtaacaattcttttacaaatatcacaagagctcttcagatccttaagagctccacgaaccttaccaccctgtttattgcgtacaacttcatggaagaggtcattccacaggatgaaaccattgatggtttcgagaatctccaggctctctcagtagaccactgttcattatcaggaagaataccactttggctatcaaagctcacaaacttgaagttactatttttatccaacaatcaactaactggaccaataccagactggattagctcactaaaccgcctgttctatctggatatatcaaacaacagcctagcaggagaaatcccaattaccttgatggacatgccaatgataagaacaacccagaataagacctattcagagcctagtttctttgagctacctgtttatgatggtaaatttcttcaataccgtacacgtactgcttttccgacactgttgaatctaagcctaaacaagttcatgggtgtgatccccccacaaattggtcagttaaaaatgcttgtcgtacttgatttcagccacaacaatttatcaggacagatcccacaatcagtttgcagcctcacaagtctgcgagttctcgatttatccaataacaacctcacaggttcaattcctggtgaactgaatagcctgaacttcctttcagcattcaatgtttcaaacaatgaccttgaaggtcctattcccataggagctcagtttagtacatttccaaattccagctttgatggtaacccaaagctgtgtggctctatgctcactcacaaatgcaaatcagcagaagaagcctcagcatccaaaaaacagttgaacaaaagggtcattcttgcaatagtatttggggtgctttttggaggggccgcaattgttttgctattggcgcacttccttttctcgctcagggatgcaattcccaaaatcgaaaacaaaagcaacactagtggaaatctggaggccggttcgttcacctctgatccagagcatttgttggtaatgataccacgaggcagtggagaagcaaacaaactcacattcactgatctcatggaggctacagataacttccataaggagaatattatagcatgtggaggttatgggctagtgtacaaagctgagttacccagtggctccacactcgcaatcaagaagctcaatggagaaatgtgcctcatggaaagggagtttgcagcagaggttgaagccctatccatggcacagcatgacaatcttgtgcctttgtggggatactgcatccagggaaactcgaggctactcatatattcttacatggaaaatggtagcctggacgactggcttcataatagggatgacgaaaccagctcatttcttgactggccaacacgtttcaagattgcacgaggagcaagccagggtctttcgtatatccatgatgtctgcaagcctcacattgtccaccgtgacatcaagtccagcaacattctacttgacaaagaattcaaagcttatgtcgctgattttgggttgtcaagattgatccttccgaacaaaaaccacatcacaacagagctagtcggcactctaggttacatcccacctgagtatggacaaggatgggttgctaccttaagaggcgatgtgtacagttttggagtggtcctgcttgagctactcacaggaagacggcctgtttcaatcctctctacatcagaggaacttgttccatgggtactagaaatgaagtccaagggaaacatgcttgaggtcctggatccaacactccaaggcacagggaatgaagagcagatgctcaaggtgcttgaagttgcttgcaaatgtgtcaactgtaatccttgcatgcggccaactatcacagaggtagtttcctgcctggacagtgtaggctccgactga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0154000, RefSeq:Os02g0154000