Os02g0157150

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Revision as of 02:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0157150| Description = Conotoxin family protein| Version = NM_001185881.1 GI:297720894 GeneID:9271194| Length = 7375 bp| Definition = Oryz...")
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Gene Name

Os02g0157150

Description

Conotoxin family protein

Version

NM_001185881.1 GI:297720894 GeneID:9271194

Length

7375 bp

Definition

Oryza sativa Japonica Group Os02g0157150, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3113443..3120817

Sequence Coding Region

3113443..3114220,3119557..3119693,3119831..3120817

Expression

GEO Profiles:Os02g0157150

Genome Context

<gbrowseImage1> name=NC_008395:3113443..3120817 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3113443..3120817 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggaacttcaacttctcctagtccttgctgctcttgtgctgctctccttcctctctcctgccacctcctgcacggagcaggagaagagctcactcctccagttcctccgcgagctctcgccggattccagcagcaagttctcccggtcatggcagagcggcacaagctgctgcacgtgggaaggcatcgcctgcggcagcaatggcacggtgacggagctctcgctgccgtccatggcgctcgagggccccatctctgtatcaattgccaacctcaccggcttgcgccgcctcgacctgtcgtacaattctctctccggcgagctcccaccggagttgatctcctccgccagcgtcgccttcctcgacgtcagcttcaaccgcctcaacggcgagctgcaggaatcttcaccatcactgcctcaccatcctcttcaggttctgaacatctcccacaatttcttcgccggggagtttccgtccacgatatgggagaagaagagtgatcttgtcgcgatcaacgcgagccacaacactttcagtggcgcgctgccgtcttctttctgcatcagctcgccatccttcgctgttcttgatctctcatacaacctcttcagtggcagcattccagctgagataggtaagtgctcttcactcagagtgctcaaggctagcaacaacgagatcaatggcagcttgtcagatgagctctttgatgcttccatgttggagcacctctcttttctgaagaatggtttggaaggagagcttgatggtcagcttaagagattggaggagctccatttggactacaacaggatgtccggggaattgccatcagctctagggaactgtacaaatctcaagatcatcaacctcaagtacaacagcttcagaggagagcttctgaagttgtcaccaagaattggcaacctgaaatccctcttgttcctatcactttccaacaatgcttttgtgaatattgcaaatgtgattcatgcactcaagaactccaggaaaatcaacactttgatcataggaaccaacttcaagggtgagaccatgccagaggatataccaatcactgatggttttcagagtcttcaggttctttccataccatcttgctcattgtctggaaaaattcctctttggctatcaaaattggccaagctggaagttctggatctgtccaacaatcaactcactggaccaataccagactggatccatgacctgaacttcctctacttcatagatatatcaaacaacaaacttacaggggatctcccaacggcaataatgttgatgccaatgcttcaacctgacaaggttgcaacccaattggatcccagggcatttgaacagcctgtctatgcagggccatcacttacatatggcaagaacaatgctctccctgcaatgctgaatcttgcaaacaacgagcttaccggtgcgatcccttcagaggttggtcagctgaaatcactcacattgctcaacttgagcttcaacagcttgtcaggacagattccacagcaacttttcgacctgacaaacctgcaggtggtagacttgtccaacaaccatctctcaggttcaattccaccggggctgaataacctgcacttccttacaacatttgatgcttctaacaacgacttagaggggtggattccagctggtgtccagtcttcatatccgtatgatttttctggcaacccaaagctgtgtgatcctacactcactcgcacctgtgattcagcagaggcacctccagtctccacgctcaccggagaagaaaccactccaaagatcgtctttgcaatcgctttcggtgcgttcttctgtttaggtgtggtgtatgatcaggcagtattatcgaggttttttggctag</cdnaseq>

Protein Sequence

<aaseq>MQELQLLLVLAALVLLSFLSPATSCTEQEKSSLLQFLRELSPDS SSKFSRSWQSGTSCCTWEGIACGSNGTVTELSLPSMALEGPISVSIANLTGLRRLDLS YNSLSGELPPELISSASVAFLDVSFNRLNGELQESSPSLPHHPLQVLNISHNFFAGEF PSTIWEKKSDLVAINASHNTFSGALPSSFCISSPSFAVLDLSYNLFSGSIPAEIGKCS SLRVLKASNNEINGSLSDELFDASMLEHLSFLKNGLEGELDGQLKRLEELHLDYNRMS GELPSALGNCTNLKIINLKYNSFRGELLKLSPRIGNLKSLLFLSLSNNAFVNIANVIH ALKNSRKINTLIIGTNFKGETMPEDIPITDGFQSLQVLSIPSCSLSGKIPLWLSKLAK LEVLDLSNNQLTGPIPDWIHDLNFLYFIDISNNKLTGDLPTAIMLMPMLQPDKVATQL DPRAFEQPVYAGPSLTYGKNNALPAMLNLANNELTGAIPSEVGQLKSLTLLNLSFNSL SGQIPQQLFDLTNLQVVDLSNNHLSGSIPPGLNNLHFLTTFDASNNDLEGWIPAGVQS SYPYDFSGNPKLCDPTLTRTCDSAEAPPVSTLTGEETTPKIVFAIAFGAFFCLGVVYD QAVLSRFFG</aaseq>

Gene Sequence

<dnaseqindica>1..778#6115..6251#6389..7375#atgcaggaacttcaacttctcctagtccttgctgctcttgtgctgctctccttcctctctcctgccacctcctgcacggagcaggagaagagctcactcctccagttcctccgcgagctctcgccggattccagcagcaagttctcccggtcatggcagagcggcacaagctgctgcacgtgggaaggcatcgcctgcggcagcaatggcacggtgacggagctctcgctgccgtccatggcgctcgagggccccatctctgtatcaattgccaacctcaccggcttgcgccgcctcgacctgtcgtacaattctctctccggcgagctcccaccggagttgatctcctccgccagcgtcgccttcctcgacgtcagcttcaaccgcctcaacggcgagctgcaggaatcttcaccatcactgcctcaccatcctcttcaggttctgaacatctcccacaatttcttcgccggggagtttccgtccacgatatgggagaagaagagtgatcttgtcgcgatcaacgcgagccacaacactttcagtggcgcgctgccgtcttctttctgcatcagctcgccatccttcgctgttcttgatctctcatacaacctcttcagtggcagcattccagctgagataggtaagtgctcttcactcagagtgctcaaggctagcaacaacgagatcaatggcagcttgtcagatgagctctttgatgcttccatgttggagcacctctcttttctgaagaatggtttggaaggagagcttgatggtaaatgtagtttgtgaattttttctctggaagcttcaccccttcagtattgctatcgttatttacatatacatgagtagatgggcctctagctgatgggccagcacacaaacacacacacacacactattctatttacagcccaacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacacgaacgattacactctttaacacctaaaccctttgttaaacaatcagcaacttgtccactagacgttacaaattctaattccaaaactccctcatccagtttttccttgataaagaaacgatccaactccacatgctttgttcgatcatgctgaactgggttgttagcaatgttgattgctgacttgttgtcacaccacaatttcatgggagtatccaccgacaactttaactcagaaagaagattccttagccataacaactcactcaaactcactgacattgcccgatattctgcctcagcagttgagcgagacaccaccggttgcttcttgctcctccaagatactaaattgccaccaacaaacacacaatagcctgaagttgatcttctatcatcaggacaacttgcccaatctgcatcacaatagccttcaacctccaagtgtccatttttcttaaaccataggcctttacctgggcttcccttcaaatatctcaagatcctatagaccgcatccatatgaccactccttggatcatgcatatatcgactcaccatactgacagcataagttatgtcaggtcgtgtatgacacaaatatatcagtcttcccaccaatctttggtatctttccttattcactggatttccagactctgcacataatttatgattttgatcaattggtgtagaggctgggcgacatccaagcatacctgtgtcactgagcaaatccaatgcatatttccgttgtgacagaactatccctctaggagatcttgcaatttcaatacccagaaaatatttcaactggcctaggtccttaacttcaaattctttgcttagattctgtttcaacctagtgatctccaagcaatcattcccagtgataatcatatcatcaacatagacagcaaggatggttatatgatctccactatgatgataaaaaactgtatgatctccattacattgcttatagtccatagcacacattgcacgcctaaaccgatcaaaccatgctcttggtgattgtttaagaccatacaaagatttcttcaatctcagcacctttccttcagtttgtgaagtagcaaatcccggtgggatatccatatacacctcttcttgaagatctccatgtaaaaatgcattcttgacatctagctgatgcaatggccaatcaaaattagctgcacaagatatgagagttcttaccgtgctcatctttgctactggtgcaaaagtttcatcataatcaattccatatgtttgactatatcccttagccaccagccttgctttgtatctttccacctttccattaggattttgctttactgtataaacccacttacagttgacaactttctttccttcaggaaatggtacaagatcccatgttttgttcttttcaagagcctctagttcatctaacatagcttgatgccaccttggatcttgctttgcttctctccaatcctttgggatttccattgaatctagtgatgctacaaaggctttatatgtggatgacaaggagtcataggaaacaaagttggatatattattttcttcatcaccctcatcttgatcttcaaaaccataccttagtggaggtttacctgcattgcttctcacactctttctgacagcaattggtaagtcagattcttctctaacttcctcttcttctccccctgactccaaagacccttgctcatgacttacatctttctctacctgattatcctcttcaacttgttggattactggacaccttgttctccttgtgtatacttgaagattttcctcttcatgtggcttcctccattcttgctcctgtgcaacaggaccacccataggatatggaattgaaccaaccacaaacttttccttctttgattgttcatctccctttggacccaatatttcaccttccatctgttgaccatcatgaccactagttgaattatcaagatcaacgaataaagaacttaaatctgtcttctcaccgtagaatgggacagattctctaaaagtaacatccatactaacaaaagttcgtcgttctgatggactccaacacttataccccttctggccagatggatagcctataaagatgcatttgacagcccgaggatcaagttttccaacggaaggtctatgatctctaacaaaacaagtgcaaccaaacacttttggtggaacaacaaattcattctttccaaatatcatctcacatggtgtctgcattccaagtatccttgatggcgtgcggttgataagataagttgctgtcattactgcctcactccacaagaatttaggtacattcatagcatacatcaatgagcgagctgtctccaaaagatgacggttttttctctcagccaccccattttgtggaggagtatcaggataagaagtttgatgcaatattccttctgatgaaagaaagctactaaattcattgtttatatactccccgccattatcagttttaataaactgaactcgagcattaaaatgatttttaatgtatgcatagaaattctggaagcatttaaacacctcatccttatgcctcataagatataaccatgtcatgcgagagtagcaatcaataaaggtaacaaaatacttcattccactcatagagaccataggtgaagtccaaacatctgagtgaattagcataaatggtaacatacttcggagtcctctactcacatatgatgttcttgtatgttttccatactcacatgcatcacatactaacttatgtttatccactctacttagttctgctggaaacatcttgctcatagtttcaaaagatatatgccccaatcgacaatgcaaaagtaataccttagcctcttctttacttgtagaagccatcaatgcaagacatacatcttcacttgtctcctttcgatccaaataccaaagtccatcacgcctgatgccagtcccaagtttcttccctgtttgcctctcctgaattaaacaattctcacgatcaagggatacccgacaatccatatgatcaacaagagaacttattgaaatcaaattcactggaaaagaagggatatataacactgatgataaagtgattgaaggagtacattgtactgttccctctcccttaactgggcatgatgttccatcagcagtttcaattgtttcttttcgtgtaaatgggtatggtttatatgatgcaaattctccacacatacccgtgacatgtctggatgcacccgagtcaagtatccaatttgaatgagaactattgattgacataaatgcttggtttgagttacctgagatagaatgaacaaggttggcaacatcaacatttgtaggtccagaacaaccctcttcaagagtgaccacattagctctgtgatcacctctatactcatagcctctacctctgttagctctacctgcataacctcttccacctcttgctccacctctatcaccacttcttcctcttccataactaggcttgcgaggagcacgacaatcacgcatgagatgccccatttcaccacaattaaaacactctctagtctctttaccttgtagcattgcataggtgggacttgatgaaggtggtgtagccttaggcaatactttcctcttaagctcatcttgagccatagctgctatagcctcatccaaggtaggaagagtagtctgatggaacatagcatcttttctcccttcaaactctggatttaggcctttcaagaattcaataacccttctgcgctcaatccatttcctcatttttgctatacaatcggggtgctctaacccaagaggatcataatgatccaaatcagaccatagatgcttcaattctgcaacatattctgcaatagaacgctccccctgtctcaaagcacttatcttctcccgtgcctccaccattagcatcacatttccttctcctgagtagagattagtgagagttttccacatctcacttgcacttgagatggtctcaacagttgtagcaatagcagggataagtgaagtcaacaaccatgctactactaaagagttggtagtgctccaagtcctccattctgcactagcactctcaggctccttcacttctccggtgacatatccttctaatcccttagtcttcaaaatcaacaatgctctccttgaccaacttaaataatttttgacaccctccaacttaatatcattttgcatcaagtcaattttttgcattgtttcagtatgaggaatcactgcattacttgtagttggggcctcactaaatttctttgcaagcatgtccaccaatttacccatcacttgttcaagtccctgattttcccccattttaatcaagcagcactcaactaactgctgtaacaaagcaaactctccttgtctacactccaccagcagcactaacaacaagccaacaattcctctaccctgtattttcttcccagtaaatcagtagtagcagcaagaacaatctcgattacctcaatcttgaagaagaacaacagtaacaacagtcactagtgcttcttccctcaaccacaagccacagtacagagtccaccaccagccaacaagcagaagcacggctgggaaccaactcaacaagcagaagcacggctggggaacccacttgtagctgctgcccctccagacctccctgctcagctcacgcacctgctgtgtgttgccgtcaccgccgctcgctgcagcagccgcgagcgtcctgacctgctgcgcctccagtccactcctacttgtccctgctcaccgtcctacaccaccaccaagaactccaacctcagcgcttgctccctcagctagggttcgtcgccgccggccgccaggagcacggctctgataccatgtagtttgtgaattttttctctggaagcttcaccccttcagtattgctatcgttatttacatatacatgagtagatgggcctctagctgatgggccagcacacaaacacacacacacactattctatttacagcccaacagtaaacagatagccaagctcaagaatatagtagttcttgatcttggatcgaacaatttcatcggcgatattccgggtagcataggtcagcttaagagattggaggagctccatttggactacaacaggatgtccggggaattgccatcagctctagggaactgtacaaatctcaagatcatcaacctcaagtacaacagcttcagaggagagcttctgaaggtgaacttctccggacttcccaatctgaaagttttggatcttgagtcaaacaagttcagtggagaaattccggaaagcgtctaccatgcagcaatctgacctcgctgaaactatcttcaaacaaattctatggacagttgtcaccaagaattggcaacctgaaatccctcttgttcctatcactttccaacaatgcttttgtgaatattgcaaatgtgattcatgcactcaagaactccaggaaaatcaacactttgatcataggaaccaacttcaagggtgagaccatgccagaggatataccaatcactgatggttttcagagtcttcaggttctttccataccatcttgctcattgtctggaaaaattcctctttggctatcaaaattggccaagctggaagttctggatctgtccaacaatcaactcactggaccaataccagactggatccatgacctgaacttcctctacttcatagatatatcaaacaacaaacttacaggggatctcccaacggcaataatgttgatgccaatgcttcaacctgacaaggttgcaacccaattggatcccagggcatttgaacagcctgtctatgcagggccatcacttacatatggcaagaacaatgctctccctgcaatgctgaatcttgcaaacaacgagcttaccggtgcgatcccttcagaggttggtcagctgaaatcactcacattgctcaacttgagcttcaacagcttgtcaggacagattccacagcaacttttcgacctgacaaacctgcaggtggtagacttgtccaacaaccatctctcaggttcaattccaccggggctgaataacctgcacttccttacaacatttgatgcttctaacaacgacttagaggggtggattccagctggtgtccagtcttcatatccgtatgatttttctggcaacccaaagctgtgtgatcctacactcactcgcacctgtgattcagcagaggcacctccagtctccacgctcaccggagaagaaaccactccaaagatcgtctttgcaatcgctttcggtgcgttcttctgtttaggtgtggtgtatgatcaggcagtattatcgaggttttttggctag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0157150, RefSeq:Os02g0157150