Os02g0158100

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Revision as of 02:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0158100| Description = Dynamin family protein| Version = NM_001052489.1 GI:115444348 GeneID:4328363| Length = 4200 bp| Definition = Oryza ...")
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Gene Name

Os02g0158100

Description

Dynamin family protein

Version

NM_001052489.1 GI:115444348 GeneID:4328363

Length

4200 bp

Definition

Oryza sativa Japonica Group Os02g0158100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3166615..3170814

Sequence Coding Region

3166764..3166949,3167115..3167258,3167343..3167469,3167746..3167825,3167933..3168184
,3168271..3168399,3169039..3169088,3169221..3169323,3169429..3169548
,3169725..3169786,3169873..3169915,3169995..3170047,3170126..3170183
,3170299..3170367,3170460..3170539,3170648..3170723

Expression

GEO Profiles:Os02g0158100

Genome Context

<gbrowseImage1> name=NC_008395:3166615..3170814 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3166615..3170814 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctcgcgcgatcggcctgctccaaggagcaccacaagatctacgccggctggttcgccgtcgccgacccagatggagatgggcgtgtcacgggtgctgatgctaccaagttcttcgccatgtccggcctgtcccgcgccgacctcaagcaggtctgggcgatcgcggacaccaagcggcaggggttcctcggcttcggcgagttcgtcgccgcgatgcagctcgtgtcactggcgcaagcgggggaggagatcactcaggacagtctgaagcgcgaagacctgagtagtttggatccacctgtgatggaaggtcttgacgaactacttgcgagatcaaaggctggggtaaagagagtacacccagaagaaaatggcgcccctcaggttcaagtgcattctgctaatagctggttcagttcaaaatcagcaaagaagatgcaggtccccctgactgctgttacttctgtaattgatggcttaaaaagactatacgtagaaaaactgaagcctctggaggttgcataccggttcaacgattttgcttccccgttattgacaagcagtgattttgatgcaaaaccaatggttatgctcttgggtcaatattctacagggaaaacaactttcattaagcatctgctgcaaacaagttatccaggagctcatgttggaccagagcccactactgaccgatttgttgttgtcatgtctggatctgatgaaaggactattcctggcaatactattgctgttcaagctgatatgccattcactggtcttacgacatttggcggtgcttttctgtcaaagttcgagtgctctcagatgccacatccgctgctcgatcatatcacctttgtggacacccccggtgtcctgtctggtgaaaagcagcggacgcagcgtagctatgatttcaccggcataacttcatggtttgctgctaagtgtgaccttattcttcttctgtttgatcctcataagcttgatatcagtgatgagttcaaacgtgtgattgcatctttacgtggccatgatgacaaaatacgtgtagtgctgaataaggcagaccaagttgacactcagcagcttatgagagtgtatggtgcactgatgtggtctcttgggaaagtactcaatacccctgaggtcgcgcgtgtttatatcgggtcattcaatgacaaaccagtgaatgaatcagctgttggaccaattggaaaggacttgtttgagaaagagcaagatgatctcctctgtgatctgaaagacatacccaagaaggcctgtgatcgtcgggtcaacgagtttgttaaacgtgctagagctgctaagattcatgcttacataattggccatctaaagaaggagatgcctgcaatgatggggaaagctaaggctcaacagcgactcatagacaacctgggtgatgagtttgcaaaggtccaaagggagtaccatcttccagccggagacttccctgacgttgagcacttcaaggaggtgttgggtgggtacaacatcgacaagttcgagaagatgaagcccaagctggtgcaggccgtggacgacatgctcgcgtacgacatcccggagctcctcaagaacttcaggaacccttacgagtga</cdnaseq>

Protein Sequence

<aaseq>MELARSACSKEHHKIYAGWFAVADPDGDGRVTGADATKFFAMSG LSRADLKQVWAIADTKRQGFLGFGEFVAAMQLVSLAQAGEEITQDSLKREDLSSLDPP VMEGLDELLARSKAGVKRVHPEENGAPQVQVHSANSWFSSKSAKKMQVPLTAVTSVID GLKRLYVEKLKPLEVAYRFNDFASPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLQT SYPGAHVGPEPTTDRFVVVMSGSDERTIPGNTIAVQADMPFTGLTTFGGAFLSKFECS QMPHPLLDHITFVDTPGVLSGEKQRTQRSYDFTGITSWFAAKCDLILLLFDPHKLDIS DEFKRVIASLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVARVYIG SFNDKPVNESAVGPIGKDLFEKEQDDLLCDLKDIPKKACDRRVNEFVKRARAAKIHAY IIGHLKKEMPAMMGKAKAQQRLIDNLGDEFAKVQREYHLPAGDFPDVEHFKEVLGGYN IDKFEKMKPKLVQAVDDMLAYDIPELLKNFRNPYE</aaseq>

Gene Sequence

<dnaseqindica>3866..4051#3557..3700#3346..3472#2990..3069#2631..2882#2416..2544#1727..1776#1492..1594#1267..1386#1029..1090#900..942#768..820#632..689#448..516#276..355#92..167#cccgcatcacccccacctcgtcaggtttccgttccgcctccgcctctgctgctcctcctcctcctcgccgccgccgccgccgcgacgaggcatggagctcgcgcgatcggcctgctccaaggagcaccacaagatctacgccggctggttcgccgtcgccgacccaggtatgccgcctcggcgcgcgctcgatctctctgtgtgtgtgacttcgagagccccagaatcgctcgctgatggtttggttcgccggtggtgggtggtgggtggtgtagatggagatgggcgtgtcacgggtgctgatgctaccaagttcttcgccatgtccggcctgtcccgcgccgacctcaagcaggtgcgccgccgccgcgagttggttttggatttgtttgagtcgggtggtttcttttggattttttttttttgataaatctgtgttgatccaaggtctgggcgatcgcggacaccaagcggcaggggttcctcggcttcggcgagttcgtcgccgcgatgcaggttttgcttccacttcgcctcttcctttatccgttacagttcgtcgttctgtgactgctgctgattcgagaggatgtttctgattgtgttgttctgttgcgattcgcaaatgcagctcgtgtcactggcgcaagcgggggaggagatcactcaggacagtctgaagcgcgaaggttgtttctcttgcgatgctgcgatctgtatttcagtgtttgtgtggatgtcccctgaatttatggtgattcttgcagacctgagtagtttggatccacctgtgatggaaggtcttgacgaactacttgcggtaagtttacaatctatggctttggtgtaattctgacgcatttcaaaatctcactgtgatgttgcaatggcattttcagagatcaaaggctggggtaaagagagtacacccagaagaaaatggtaagaaatgtgctcccaagggtaccacctggtgaatgatgtcagtgatgagtaggctgtgatgctaacttctttctgtcgtgcaggcgcccctcaggttcaagtgcattctgctaatagctggttcagttcaaaatcagcaaagaaggtactagacttacgtggtggtgtttcaggattttcgtgcacttttatcatgtttatcttcagggctaatatcattttcttgctcttatagtttattgttgagtcatcgaaatgttcttagtactgcggtctgcagcttaacaatttaatgattttgtaccttcattctgtccgcagatgcaggtccccctgactgctgttacttctgtaattgatggcttaaaaagactatacgtagaaaaactgaagcctctggaggttgcataccggttcaacgattttgcttccccgttattggtatggatggttcacatttattgaaaatatatcgaatactttcatgctaattggattattgctctatttctcacatatcattacattaattgtaccattttccagacaagcagtgattttgatgcaaaaccaatggttatgctcttgggtcaatattctacagggaaaacaactttcattaagcatctgctgcaaacaagttatccaggttctgtgattgaactaatagtgtagtaatacataatatttcagttccactcttagccacactgcacaatttaacgttagtctcttctaatataatcagagtataactttaatttttccctttcaactgcaggagctcatgttggaccagagcccactactgaccgatttgttgttgtcatggtaaatgttaacatgagtatttaatataacatgcatcagtgatatcgagttagctattacttgagcatatgaactatgggggatcttttataaagcaggaaaattgcatatgattgattttgttttcttgtatactcttgttttcaatatattttgtgctttcaaagtaccatttttggtcgtatttcagcaaaagaaaaaaaaccaagttagagctgcttcatcattcattgtcaatagattaaaaagtttatcagttgacaatatcaggttggtcggttgtaagatgcaagggtggcatacattatactccctttcttctaagttgaatggttcacatgtggactagtcatataccatatcgtgttttctacagctgttaagattatttattggatgaattgccttcagcagcacacattggataaaaacacaactattgttatccattttacatcatggaactacaggttttcatcaaagtttcattcaatgcacacctgtagaacatttattgattctttttaagttgttagcaaaaatatggcttctgaaatctgttggtgattttacaatgttgtttaggctgctacataatgatcccattagtctctcatttttcttctttatttgtactagtctggatctgatgaaaggactattcctggcaatactattgctgttcaagctgatatgccattcactggtcttacgacatttggcggtgcttttctgtcaaagttcgagtgctctcagatgccacatccggtaagcttcaattggtgatattaacacatacagaaagacattcattgcacaaactgatacaagccatttttttttcttccatgaagctgctcgatcatatcacctttgtggacacccccggtgtcctgtctggtgaaaagcagcggacgcagcgtagctatgatttcaccggcataacttcatggtttgctgctaagtgtgaccttattcttcttctgtttgatcctcataagcttgatatcagtgatgagttcaaacgtgtgattgcatctttacgtggccatgatgacaaaatacgtgtagtgctgaataaggcagaccaagttgacactcagcaggtagaggttttccttgcaatcaatacgggaagtgttacaccatattctgttttaaaatgtgctatgttgtgcatcagaatcacataatccccttattcatgctgcagcttatgagagtgtatggtgcactgatgtggtctcttgggaaagtactcaatacccctgaggtcgcgcgtgtttatatcgggtaaattcctacatcttcaattatttaacaccccatcttttgcttctgtttatagtgctgtcgtaatcttgattctggtgactgactgactgactgactggatgttgtataattcctgtatcaatcataaaacttgtacttagaatatttttagaagtctaaaagcatcgctagtaactgactgtttaattatatgagcaaaatactatataaatctctcagagttagatggaggttgttgaaaactgaaattcactctgaaactaatgtttgcaggtcattcaatgacaaaccagtgaatgaatcagctgttggaccaattggaaaggacttgtttgagaaagagcaagatgatctcctctgtgatctgaaagacatacccaagaaggcctgtgatcgtcgggtatgatgttctctcccacttatctgatttttttttcttttcaactgctgaattttcaatgaatgtcgccatttgtacttgcaggtcaacgagtttgttaaacgtgctagagctgctaagattcatgcttacataattggccatctaaagaaggagatgcctgcaatgatggggaaagctaaggctcaacagcgactcatagacaacctgggtgatgagtttgcaaaggtactagtagtacttacaaacaacttaattgccaggatagttcgatctatattcatcacaagaagctcatttccaaccgcagtgataaaatggatcttataactgcattatttttttttccataatcttcacctgcttgcatctgaattcaaactgctggaacaggtccaaagggagtaccatcttccagccggagacttccctgacgttgagcacttcaaggaggtgttgggtgggtacaacatcgacaagttcgagaagatgaagcccaagctggtgcaggccgtggacgacatgctcgcgtacgacatcccggagctcctcaagaacttcaggaacccttacgagtgagcccgctgacctctcgtcagttgtaagataaagatgaccccgctcggtcgtgagtcgtgacactgtatgtgagtgacacctgatgatgaaggaatatgttgtcaaggcgagacatggacggttttctactttacctgcccatcttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0158100, RefSeq:Os02g0158100