Os02g0158400

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Revision as of 02:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0158400| Description = contains InterPro domain(s): IPR013742, IPR009044| Version = NM_001052491.1 GI:115444352 GeneID:4328365| Length = 40...")
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Gene Name

Os02g0158400

Description

contains InterPro domain(s): IPR013742, IPR009044

Version

NM_001052491.1 GI:115444352 GeneID:4328365

Length

4099 bp

Definition

Oryza sativa Japonica Group Os02g0158400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3182908..3187006

Sequence Coding Region

3183313..3183432,3184044..3184132,3184767..3184840,3184935..3185029,3185585..3185677
,3185754..3185851,3185947..3186026,3186912..3186949

Expression

GEO Profiles:Os02g0158400

Genome Context

<gbrowseImage1> name=NC_008395:3182908..3187006 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3182908..3187006 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcgcctctcccgcttcgtcccctcctcctccaggagagtcactgacctaaaggatgctctctggagtggttctttgactttccaacatgctctttcaacatttgcagcagacgagaacacatctggtagaaaatttgcaagctacaccgtgttcaagggaaaggctgcactttctatgcaacccatactgccaagcttcagcaaactggaatctggaggatctcgtgtgaacaaaaatggatcggtgatgttgacttttttcccggctgtgggacaaaggaaatatgattattcaaagaaacagctctttgctctgtcacctactgaagtcggaagcttgataagtcttgggcctgctgaatcttgtgaatttttccatgatccctccatgaaatcaagtcatgaaggccaagtgaaaaaatcgttgtcagtcactcctctcggcaatgacagtggatactttctgaatataactgttctgaacaacttgcagaagacaactgagcgactttcactcccaatctcaaaagctgagtttacagttatgcgcacagcattgagtttcgcattgccgcacatcttgggctgggaccaggccttgactaatcaccagccaagtccatcaccagctagcaagcccagggtggagcgcccacacccagattcagagtgggaaaggtga</cdnaseq>

Protein Sequence

<aaseq>MQRLSRFVPSSSRRVTDLKDALWSGSLTFQHALSTFAADENTSG RKFASYTVFKGKAALSMQPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKK QLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNIT VLNNLQKTTERLSLPISKAEFTVMRTALSFALPHILGWDQALTNHQPSPSPASKPRVE RPHPDSEWER</aaseq>

Gene Sequence

<dnaseqindica>3575..3694#2875..2963#2167..2240#1978..2072#1330..1422#1156..1253#981..1060#58..95#attcggcatccgcttctcggtgggcaacgcgacggcggcggaaagccaaggccaacgatgcagcgcctctcccgcttcgtcccctcctcctccaggtcagtctccgcctaaaccctaaaccctagcttaaaccctagcgctcgcgcgctcgctctctcggccgccctagccgcggcggcggcgacattggtgcatccgtttgtgcgattgtggaggggcggcctcgtctgggactcgtggtgccgaccggttcgttgatcttagggttcgtgtttggtggtctctctctcctagttcggtgtgccttgtgcaatcgacggtgaaacggggtggggttttgggggtttggcgatagggttagggcctgtgtgtttttttttcctcccccgttttacttcgccatgggtttttatgtgttaattacgttgtagatgttttaggagattatattatggttttgctccagttgcgcagagtgtcagcggtgtactttcccagtcacttgtatccccgtttgacccacgggacccgtgtttgggtagtgatgaatcggtcggtggtgctgagctgattgttatttacttattttgttgttacaagttgtgcgtgaataatactgatctcttgttcccagacacaaatcgaacctgttgtgttgacgtaacaatactatttgcgagattcttacagtaaagtttagtaacgatcgaatgcagtgctgctggacatgcaattggaaaattcaaggctgtgctgcaacttagcatcctgtttggagctgatcaagttcatgctggtttagttggttaatttgttttctgtagttcattttttctcgcgtagtaattaatgtatatagtgaatggcaatttaagtagtacggccaaccaatcttacaatggtatcttcaagtcaatcctttgttgtgttatggttctgttctttccacctgctccaataagtgtattcccccttctcaggagagtcactgacctaaaggatgctctctggagtggttctttgactttccaacatgctctttcaacatttgcagcagacggtgaagactttttcctttatacactttagtcaaagttgctaattttatcaaaagtgtacatactaataaacatattgtttactatctttatgcagagaacacatctggtagaaaatttgcaagctacaccgtgttcaagggaaaggctgcactttctatgcaacccatactgccaagcttcagcaaactggaagtatgcacatttttatttgtttgtgttctaacatacaattccaaatttgcactatctaattttcctatttcatcagtctggaggatctcgtgtgaacaaaaatggatcggtgatgttgacttttttcccggctgtgggacaaaggaaatatgattattcaaagaaacaggtaatgatatttcttgagtacttgatatttcctggcaataaaatatgcctacccactgataatcgctagtcacatcaacattgtatccatattgggatgaaataatgtcaaattcatatggaagaaatttatttatgaaaaccaaagcagcgtagatccatagcctattggctattgccaatactttatatgttggttcactcaagaaaatatgcaattttataagcatctaatgcaatataaatgagtttgcatgatgcttgctacaaataatgcaccagctaccaagttaattggtacacatgatttaactgtatgtgctcaatctcactttagtcatgagagggagggagcctttttgtagtgatgatcataggatcatatctggtaataaagactgcttgattttttttttctttttttgagttttgtcacttctgctctacactttgtgggtttttacgctccatacaggagtagtgaccagattgctctttgtttctctctaaaactaagttctattaactttgtttatctgcgacatctattctacagctctttgctctgtcacctactgaagtcggaagcttgataagtcttgggcctgctgaatcttgtgaatttttccatgatccctccatgaaatcaaggtttgtttataactttgtaacaaacgtactgtttgtagatgctttatgctttgaagtcatggccttctaaccttaccctcttcacttttgtcagtcatgaaggccaagtgaaaaaatcgttgtcagtcactcctctcggcaatgacagtggatactttctgaatataagtaagtggctttagtaacgtatcaaacatgctttattttattaccagtatacccctgtttcttatgttcatttgtgacattgccattggtcaaattggtcaaatatcatttgatgatttgatcaatcggttgacatcttgagatgttctgttagcatttttggaatgcctgtgtaattacattataattatattgtgtgctaaagggtgtatccactatccagtgttgcaggcattctggctagtggctaccacaaacactttcatcatgaacaactattgaccatggagtcgttatactagttctctttcataagaattttatgtctgtgattagttgacatttagcatggcggaatattaagctatggcatgtgcctgtggcaaccctcagctataatacctaacaggatctaaagttgactgagtgattaaaacttgtataataaccaacactgcagtttatgtggttaaagttatgcctgtcttgactattgacttggttttcattgcgaactcttaaaatgactgcctgaaatgaaaagagtacaagaagttattcctgcttaatagccagttatcaacttgtacaccatggtttcagtgacagatacatcacagaatcttctttgcagctgttctgaacaacttgcagaagacaactgagcgactttcactcccaatctcaaaagctgagtttacagttatgcgcacagcattgagtgtaagtttccaaattgccatttgaaatctgttgctaaactataattttgtccagttagtcaatatgtagctaagcttaaagacatcaataaattaggtgcactactgtttttatcatagctttatattgaaacagttcatgccagtgtatagtaccagtttcgtggcatacatcagagcttcatttaaacaagttaataaaaaccttatgtctattgcctctgttgttgcttcagtattaatgtcattgtgaatgtgttatgtatattctaattttactgtatcaacattaccagatggtttagtccttactcattagcggaatcatgcatgcattatgttaagcagctctatgctaccgcttcattggcaatgacacactactcggtggcattgttcatttatcatatcatagtaatgacattggcagcactcattgccacgacaagccacttgaggctgctatatacatataacatatttcttccttgtaattatatttggttaggtatgtaattgtagctgccaggttttgaatccattatcttaaaaagattctgcttagggcttcttccatgtgtttttgtggttgattagtgtgtgtatgtgcagttcgcattgccgcacatcttgggctgggaccaggccttgactaatcaccagccaagtccatcaccagctagcaagcccagggtggagcgcccacacccagattcagagtgggaaaggtgaagctcccttgtaggcaccagcagcatggagggatttgaacatcatcgctaccaaaatttggatgctgttgcactttctccacgaaatcgaattaggagatatctattagattcatggagctaaagatcgaatgtcacagattgagcacaccatgaagggttgtgtttgttcaatgcatgtttgaacttcaccaggcctactagttgcaaaattctactccagttagctatgcattgcgtttgacaccttgtgccttttgaatgtgtgacttatgttatttgcaaaatggtggagtcttacaaaactactcaaacgtagttgagtggttatggctttaaaaagctaaacaaaaaacatatctgtttgttaaggctcaaactttttattccactgcatcttaaactc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0158400, RefSeq:Os02g0158400