Os02g0158900

From RiceWiki
Revision as of 02:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0158900| Description = Similar to SNF4| Version = NM_001052495.1 GI:115444360 GeneID:4328369| Length = 2247 bp| Definition = Oryza sativa ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0158900

Description

Similar to SNF4

Version

NM_001052495.1 GI:115444360 GeneID:4328369

Length

2247 bp

Definition

Oryza sativa Japonica Group Os02g0158900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3204084..3206330

Sequence Coding Region

3204142..3204674,3205446..3206178

Expression

GEO Profiles:Os02g0158900

Genome Context

<gbrowseImage1> name=NC_008395:3204084..3206330 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3204084..3206330 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcagcagctgaggacaccggcggcggaggaggcgctgctgcgcggccacgccgccggtgacaaggacgacgccgtcgccggcgagagcaaggacgcgaagcgcgcgcgggcggggctctgcggcgtgctccgggagcggaaggtggtggagctggcgcgcgccaagcggcggctggtggaggtcccctacacggcgacgctcgcgcacacggcgaacgcgctcctcgccgcccgcgtctccgctgtcgcagtcgccgcgccgccggggcactggatcggcgccggcgggtccatgatcctcgagtccgacccggccaccggcgccgtccgcaagcactacatcggcatggtcaacatgctcgacatcctcgcccacatcgccgaggccggcgatgacaacgacgccgccgccgatgctgctcccagcgaggccgtcgacctcgaccgccgcatggccgtgccggtctcctccgtcatcggccactccctcgaaggcctcaccctgtggactctccatccaaacaccagtgtgctggattgcatggagacgttcagcaagggggtgcaccgcgcgctggtgccgctggagagcgcggcggagaatgtggtggcggcggagctcgtcgaggcggcgccggggtacaggatggtgacgcagatggacgtggcgcgcttcctgcgcgcgcgcgccgccgagctgggggacgccatcctgtcgcgctccgtgcgcggcgtcggcgtcggcggcgccgtgctcgccgtggcgagcggcaccaaggtgatcgaggccgtccgggcgatgcgcgccgcgtcgctcgccgccgtccccgtcgtggacgccgcccccgccgacgacgccgacgcgcggcggatcctcctccagctccaggacgggagggggaagcgcgtcgtcgagacgttctcggcgacggacctccgcgactgccccgtggcggagctccaggcgtggctgggcgtcgccgtggcggagttcaagaagaaggtggccatgtaccgcgccggcgttctcgccgccgacgccgacgaggacgaagagcggcggcgggagatggtgacgtgctcgccggagagcacgctgggggaggcgatcgagaaggcggtggcgcaccacgtgcaccggctgtgggtggtcgacgaggaggggttgctcgccggggtggtgtcgctgaccgacgtgctccgcgtcgtcagggaggccgccatcggcgaggaccgggagctccacgacatcctaagctag</cdnaseq>

Protein Sequence

<aaseq>MAQQLRTPAAEEALLRGHAAGDKDDAVAGESKDAKRARAGLCGV LRERKVVELARAKRRLVEVPYTATLAHTANALLAARVSAVAVAAPPGHWIGAGGSMIL ESDPATGAVRKHYIGMVNMLDILAHIAEAGDDNDAAADAAPSEAVDLDRRMAVPVSSV IGHSLEGLTLWTLHPNTSVLDCMETFSKGVHRALVPLESAAENVVAAELVEAAPGYRM VTQMDVARFLRARAAELGDAILSRSVRGVGVGGAVLAVASGTKVIEAVRAMRAASLAA VPVVDAAPADDADARRILLQLQDGRGKRVVETFSATDLRDCPVAELQAWLGVAVAEFK KKVAMYRAGVLAADADEDEERRREMVTCSPESTLGEAIEKAVAHHVHRLWVVDEEGLL AGVVSLTDVLRVVREAAIGEDRELHDILS</aaseq>

Gene Sequence

<dnaseqindica>59..591#1363..2095#cggacacagattcatcaccactagaatcttccacacaaaactcagtacaagatcggcaatggcgcagcagctgaggacaccggcggcggaggaggcgctgctgcgcggccacgccgccggtgacaaggacgacgccgtcgccggcgagagcaaggacgcgaagcgcgcgcgggcggggctctgcggcgtgctccgggagcggaaggtggtggagctggcgcgcgccaagcggcggctggtggaggtcccctacacggcgacgctcgcgcacacggcgaacgcgctcctcgccgcccgcgtctccgctgtcgcagtcgccgcgccgccggggcactggatcggcgccggcgggtccatgatcctcgagtccgacccggccaccggcgccgtccgcaagcactacatcggcatggtcaacatgctcgacatcctcgcccacatcgccgaggccggcgatgacaacgacgccgccgccgatgctgctcccagcgaggccgtcgacctcgaccgccgcatggccgtgccggtctcctccgtcatcggccactccctcgaaggcctcaccctgtggactctccatccaaacaccaggtagtgtcttcttgaattgaaccatacaaatcatttaatttctttcctcgccaaaaagggaagaaaccattatttcttcctgacaaaatcagatcataaataaattgcacatttgcactaatttgatttctcatcatcgtggagttaattagctgttgatgtgtagataattagtgcttattcgggttgtaggatttttttaaggaattttaacctatatatagaaataggaaaaagaatagaagaaatagaaatacatgcacactttaattcataggaatctttcaagaggtttaagtggtagaaaattttgtatgttttctttctacagcttgtaatgaaaaatttccttctgttttcctatactcatattcttgttacaaactgaaaccgaatgacacacataaaaaaatatttcttcagaattcaaaacctttgttttttagctgttgatacgtgtaattgtaaaaaaaaatgtttttattgacacgttgtcggttgttgtgaactactccaatcttgctcacaaaattagacaataaataaatataactaatttcttattctagtatgtgttaaattataattgtaaaattacttgttaatatgtccatttgcaatataagtttgtaacaacattttttttttgaaacaacccgcataagatagtgtgagtttatatagacgtttctattgacagagagaaacaatttcagaatggtgacgcaatttacgattgccttttacaatttgtgttttgtgaactgcaagtgtgctggattgcatggagacgttcagcaagggggtgcaccgcgcgctggtgccgctggagagcgcggcggagaatgtggtggcggcggagctcgtcgaggcggcgccggggtacaggatggtgacgcagatggacgtggcgcgcttcctgcgcgcgcgcgccgccgagctgggggacgccatcctgtcgcgctccgtgcgcggcgtcggcgtcggcggcgccgtgctcgccgtggcgagcggcaccaaggtgatcgaggccgtccgggcgatgcgcgccgcgtcgctcgccgccgtccccgtcgtggacgccgcccccgccgacgacgccgacgcgcggcggatcctcctccagctccaggacgggagggggaagcgcgtcgtcgagacgttctcggcgacggacctccgcgactgccccgtggcggagctccaggcgtggctgggcgtcgccgtggcggagttcaagaagaaggtggccatgtaccgcgccggcgttctcgccgccgacgccgacgaggacgaagagcggcggcgggagatggtgacgtgctcgccggagagcacgctgggggaggcgatcgagaaggcggtggcgcaccacgtgcaccggctgtgggtggtcgacgaggaggggttgctcgccggggtggtgtcgctgaccgacgtgctccgcgtcgtcagggaggccgccatcggcgaggaccgggagctccacgacatcctaagctagacaacttttttttttttttgtcgtaaagacaagaaaagtatgtatctgcactgcaaactgccatggtcggcacaatgtggttgttttcgtgttgtgaattttgctttgtttccatcaacatcaatggatcggtttgggctggtttagttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0158900, RefSeq:Os02g0158900