Os10g0391300

From RiceWiki
Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0391300| Description = DNA-binding SAP domain containing protein| Version = NM_001071045.2 GI:297610430 GeneID:4348530| Length = 4302 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0391300

Description

DNA-binding SAP domain containing protein

Version

NM_001071045.2 GI:297610430 GeneID:4348530

Length

4302 bp

Definition

Oryza sativa Japonica Group Os10g0391300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13374966..13379267

Sequence Coding Region

13374966..13375176,13375258..13376022,13376228..13376329,13376912..13377039,13377314..13377425
,13378064..13378178,13378667..13378740,13378957..13379267

Expression

GEO Profiles:Os10g0391300

Genome Context

<gbrowseImage1> name=NC_008403:13374966..13379267 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13374966..13379267 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcccccgccgccgacgacgacgaccaccgcgccgccctgccccgtgaggaggacgacggggaggaggaggagggatcggaggaggaggtggagagcgacgacgaggaggaggaggagggggaaggatatgactggtcggaggaggacgaccccgaggccgcgagcctcgccggcatctgcgaccccgacgcgggctcctacgacgaccccaccttcgaccccgccgccgacggtgacctcgaggtggacgccgtgctgcggtccaggatggcccggatgtcactctcctccgcgcgcaaggacaggaaaggatcgcggatgccgaagatggggaaggaggagatggatcttctagccatggtggacaagctgatgcatgatggccagttggagaaactaaaggtttatgaatgcaaagcatatttgaggatgcacaagctaagattgtcaggcaacaaggaagtgctcctaactcgcatcagaggacaaattgagaaaaaaggagctcctcgtggtgtcaagggtcatttatgtggtcaaaggacaaatgcaggtcgaataatcaaagaaagctatggcactaagaagcaacagcacacgttcactccatggcttgatgaagaggaaagaaacagagccctccaagaaaaacatgcaagagggtatgtggcacgtaagacaagggaagtcaggattaaggacaaagagaatgaacggatgaggagattaaataggaacaaggaaaacaagagcaaaggacaggacaacatgaataaaaaatcatctcaagcggtttttccgcaacatacggtgactacgaatactgttcagaaaagagctgagaagataattccttcactccaacatggtgaatctgggaactcaagtcagcaacatttatcatcaaagcaaactcccacagagcaattgctccattacctgccacagttccctcatcctcaacaacacaacgaagtgcttctccaaaagggaacatcaagaactagcacaacgcagctcattaaccatcaggctccttccctccaacatgccgtaaaagtggaaacaacacagcagcagcagcagcagcagccgccaaaatcaatcaagcctgctcctatacagcaaagttctgcatacccacagcagtatcccaaacatcaacaccacaatcaagcgcttccgcgggttcctccttcgcaagagcaaagggctgcagtatcccaaacatcagctgccagacaagattttaccaatcaccaggctcctccatccagacaacatggaggatcagagaacatgaggcggcaggagatatcttcaagacctactcctactcctactccacagcaagcagtctcttacacacagcagcaacctcctaatcatcaatacaggaatgaagcgttttggcagcagggcgggacaagtacttcaagaacaggcttcatggatcgtcagagtaacaattggggctctacagaccatgataaaccagccttccagcctttcactcagaaggcaaagacataccaacatggttccaatggctctggtcatcaccaggctcgtgtcgatcgcgaaacgcatcaacctctcaggcaaatgtctcaagatcagtatcatcaccaacagaaccatcatcagaattaccatggtcgccagggaatgaacggaaaccagtaccatgacaggcagaatcataaccagaatccccagaggtttcgaccatggaagccatgcttcatttatcaacaacagggatggtgcccgtatggggaaaactgcaaatttatgcatgatttgaggtag</cdnaseq>

Protein Sequence

<aaseq>MAAPAADDDDHRAALPREEDDGEEEEGSEEEVESDDEEEEEGEG YDWSEEDDPEAASLAGICDPDAGSYDDPTFDPAADGDLEVDAVLRSRMARMSLSSARK DRKGSRMPKMGKEEMDLLAMVDKLMHDGQLEKLKVYECKAYLRMHKLRLSGNKEVLLT RIRGQIEKKGAPRGVKGHLCGQRTNAGRIIKESYGTKKQQHTFTPWLDEEERNRALQE KHARGYVARKTREVRIKDKENERMRRLNRNKENKSKGQDNMNKKSSQAVFPQHTVTTN TVQKRAEKIIPSLQHGESGNSSQQHLSSKQTPTEQLLHYLPQFPHPQQHNEVLLQKGT SRTSTTQLINHQAPSLQHAVKVETTQQQQQQQPPKSIKPAPIQQSSAYPQQYPKHQHH NQALPRVPPSQEQRAAVSQTSAARQDFTNHQAPPSRQHGGSENMRRQEISSRPTPTPT PQQAVSYTQQQPPNHQYRNEAFWQQGGTSTSRTGFMDRQSNNWGSTDHDKPAFQPFTQ KAKTYQHGSNGSGHHQARVDRETHQPLRQMSQDQYHHQQNHHQNYHGRQGMNGNQYHD RQNHNQNPQRFRPWKPCFIYQQQGWCPYGENCKFMHDLR</aaseq>

Gene Sequence

<dnaseqindica>4092..4302#3246..4010#2939..3040#2229..2356#1843..1954#1090..1204#528..601#1..311#atggccgcccccgccgccgacgacgacgaccaccgcgccgccctgccccgtgaggaggacgacggggaggaggaggagggatcggaggaggaggtggagagcgacgacgaggaggaggaggagggggaaggatatgactggtcggaggaggacgaccccgaggccgcgagcctcgccggcatctgcgaccccgacgcgggctcctacgacgaccccaccttcgaccccgccgccgacggtgacctcgaggtggacgccgtgctgcggtccaggatggcccggatgtcactctcctccgcgcgcaaggacaggttcggttcgggcgcccacctcccctctcttccccccccttccacactgatgaatgatcttggggggctttgtccaatttctgcgatcacaaattgggaatcgggatttggtttgcgaatttgggttggttcttcgcctccgtgaatctcgcttttttttttcccgaaaggggttgatttaggttttggtttttgtacgagtttcgcaattttcaggaaaggatcgcggatgccgaagatggggaaggaggagatggatcttctagccatggtggacaagctgatgcatggtcagttctttcttcgattgccattgtgtgactgtgatatctccaacaatgtgatgcaaactggtaaccgggagggcctgaaattttgcctgctagtgtgatcttgtgaagagtgtgacatgagaggaaaaaaaacgacttagcaaaagtaaaaaaaaaatgttttgttttgtaacgcaatttgagataactgggtaatgtgatacaatgtatgttgtgcacgactggtttcattctttctactacttccaaagaaatttgatcagtagtacaattttagaatcgtcatgttttagctctttcaggtaaaccttcatttcttaatgtaattttaagccgaagcagacaaattgtttgcagaaactgtatcttagcattgctacagtttcatggggtacattatcgaaatagtaaatttccatgttgttactggtcatcacatattcttattgttgatcatatgagtgatgtgctattgcaattcacagatggccagttggagaaactaaaggtttatgaatgcaaagcatatttgaggatgcacaagctaagattgtcaggcaacaaggaagtgctcctaactcgcatcagaggacaaattgagtatgaactatatcctttatgtaatctgtccttcttctttatatgttacttgtcaactttgttgatattttgtaatgcaaatgaactgcttttgtttgaccactttcttgtgcttcaaaaccagggtgaaaactatgggagaggtgaagtatccagtgtcaagttttgttttgaactgtcaaggtgatcagtctaacattcatgctatagtttcacagtgatatgaatgacaagaaaattagaaagctttctaaacttgtttcagttaatggatagtccgtagttcatgcacttaaggttgtctgaaataacaccgcccacgttgaagtatagttctggtcttctggtagagttgtagttctcgaatacataatttaatggcattttcatttgcaataccttttttttctttctacagtttggactgtttaagctctaactttttgccttcttatgcaccccttaaatatcataggtgattcatgcaaaggtgatgttgtggtctttgagcaaaatatttacaaaaggtaatggatattaggcagagtgttaatttactgaagtgatgggcatgattctccaatcacaatatttatatataatgtcctttttactttggctgttgattatcactgcaggaaaaaaggagctcctcgtggtgtcaagggtcatttatgtggtcaaaggacaaatgcaggtcgaataatcaaagaaagctatggcactaagaagcaacagcacacgttcactgtaaattcttacttctttttaccagcataagtttttgccttaagctacaataatcatcatagaccgcttaaaaccaacagagaaatatgcaaatgcagattgagattttatggagtagggggtacaaaccatggcctcccctccatccactcctcataaagggtagaaatctctacaaggataagaccatgagacaggtgtgttcttaaaggttcattttgtcttagggaaagcaggacttaattattgaagctaatttctgttacactcacagccatggcttgatgaagaggaaagaaacagagccctccaagaaaaacatgcaagagggtatgtggcacgtaagacaagggaagtcaggattaaggacaaagagaatgaacggatgaggagattaaataggtaagcctattaactgtgacatgcgttagtgatgattataatataaacctttgtcatggtgtgtatgcatctcaatgaattcttctgttcaaaaaactatggtaacaggtcatatcatttaagggccaaaagagagaaaatattctgttcagaaccagcatgaaaatttgctactttgagatcatctcatcctgcttatgaagtttacatccagtccattgtttaaacattggaaatagattctgattgggaagatgcaagtagacagtagactaattagaaagtttgagctgattctagatttctagttacaatgtgttggtcatggtgctaggatatatcaaacatatgactgatcaagaaatctaactgcttttttttggagatcccagccatgtgtcctaattttctacagcactttctctgaaacttaactaaatcagaatggtagcacatgctatgattttttcctctcgtcagtagcattatttaattatctactacatcttaaatttgtgatcagagttcatatcattgtaaaagaaaacttttgacttctcaaaatgttgttatgattaataggaacaaggaaaacaagagcaaaggacaggacaacatgaataaaaaatcatctcaagcggtttttccgcaacatacggtgactacgaatactgttcagaaaaggtacttctgaatgctatcactttctcatgttagaaaaagtgtgattttgcttcattgtagtatattttttgtcaggattactgttgtgcattgccatctaaatatgagatttacataggaaagaaaatgcatgcagggaattctctgttattttacatctaaaattatgctgtcatttctctaatgcgtgtctttcatgtactagagctgagaagataattccttcactccaacatggtgaatctgggaactcaagtcagcaacatttatcatcaaagcaaactcccacagagcaattgctccattacctgccacagttccctcatcctcaacaacacaacgaagtgcttctccaaaagggaacatcaagaactagcacaacgcagctcattaaccatcaggctccttccctccaacatgccgtaaaagtggaaacaacacagcagcagcagcagcagcagccgccaaaatcaatcaagcctgctcctatacagcaaagttctgcatacccacagcagtatcccaaacatcaacaccacaatcaagcgcttccgcgggttcctccttcgcaagagcaaagggctgcagtatcccaaacatcagctgccagacaagattttaccaatcaccaggctcctccatccagacaacatggaggatcagagaacatgaggcggcaggagatatcttcaagacctactcctactcctactccacagcaagcagtctcttacacacagcagcaacctcctaatcatcaatacaggaatgaagcgttttggcagcagggcgggacaagtacttcaagaacaggcttcatggatcgtcagagtaacaattggggctctacagaccatgataaaccagccttccagcctttcactcagaaggcaaagacataccaacatggttccaatggctctggtcatcaccaggctcgtgtcgatcgcgaaacgcatcaacctctcaggtcaagaaaccaggattaccattgggaggaccagagttatcatcaccaacagaaccatcatcagaattattatggtcacaggcaaatgtctcaagatcagtatcatcaccaacagaaccatcatcagaattaccatggtcgccagggaatgaacggaaaccagtaccatgacaggcagaatcataaccagaatccccagaggtttcgaccatggaagccatgcttcatttatcaacaacagggatggtgcccgtatggggaaaactgcaaatttatgcatgatttgaggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0391300, RefSeq:Os10g0391300