Os02g0165000

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Revision as of 02:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0165000| Description = RINGv domain containing protein| Version = NM_001052529.1 GI:115444428 GeneID:4328407| Length = 4830 bp| Definition...")
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Gene Name

Os02g0165000

Description

RINGv domain containing protein

Version

NM_001052529.1 GI:115444428 GeneID:4328407

Length

4830 bp

Definition

Oryza sativa Japonica Group Os02g0165000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3495318..3500147

Sequence Coding Region

3495792..3496034,3496167..3496246,3496665..3496755,3496862..3496934,3497128..3497422
,3497585..3497759,3498349..3498795,3499994..3500053

Expression

GEO Profiles:Os02g0165000

Genome Context

<gbrowseImage1> name=NC_008395:3495318..3500147 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3495318..3500147 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatagccccggtggtgcggcggcggcggcggcggcggcggagtccagcaatcgcgcgggagaagatgctaaaagtgatggtgtatcttgtcagaattcgcgacggccaaacctttcattacaaataccaaacagggcatttgatgacactctgccaacgtcaactagaatcaaaatatcacccagcccaaattctgcaagaagtggtttaccaccaaggccgaattcaactagaacaaaatcatccatcaggggcatcattccacaaaggagcttcaaagcaaagagttcattacaggatggtgaccagacaattcttctaattcctgacacaccatcatcatcaggacagcaggtgaaggcaactacatcaagatcattttctttcacaaaggtcatcaactccttatcagcgaagcgaacccactctcttccagttactcctgttgcagcttcaggaccttcttctcatgaaggtcatgcagacaacctgccaagtacagttaagaatgaggttgaaacacaaattaggcgctcactctcagcaccaggaaatcatgatagtaaggatctgaggaggacggcttcatcaggccttatacgtgtgattcccacaaccccacgacctgttcctgttgaaactgttgcatcaaatgatggcattgaagaagcagtagatgctcctgaagatggaggtgaagacattcctgaagaagatgctgtctgcagaatttgcctagttgaactcaatgaaggaggtgaaacacttaaattggagtgcagctgcaagggagaacttgctcttgcacaccaggagtgtgcaataaaatggtttagcatcaagggaaacaagacatgcgatgtttgcaggcaggaagttcagaatctacctgtgactttattgagaatacagattcgaactgttaacagacaaccgcggaatggtgttcagcaaagagcagcacatccacacagattttggaaggagactccagttctagtcatggtcagcacgcttgcgtacttctgtttcttggagcaactcttggttgctgatatgaagtcacgtgcactagctatttctttgcctttctcctgtctcctgggcatattttcttccatcctcgcatccacaatggcaaccgataattacctatgggctttcgctacgttccagtttgctttcctaatcctatttgctcatattttctacaacttgttaaaaatgggggcagtccttgcaatcctacttgcatcgttcactggtttcggcatcgctattagtctaaatgcaatgctaatagaatacctgaggtggagactcctgcggaatcaacggttaactcaacgtagaaatcacagacatggtcaatctggaaacaatgcttcaaacgagaacactgcaagtaatgctaggcagcaaggcagcggaagcgatcaacagtctgcagaacatggctga</cdnaseq>

Protein Sequence

<aaseq>MDSPGGAAAAAAAAESSNRAGEDAKSDGVSCQNSRRPNLSLQIP NRAFDDTLPTSTRIKISPSPNSARSGLPPRPNSTRTKSSIRGIIPQRSFKAKSSLQDG DQTILLIPDTPSSSGQQVKATTSRSFSFTKVINSLSAKRTHSLPVTPVAASGPSSHEG HADNLPSTVKNEVETQIRRSLSAPGNHDSKDLRRTASSGLIRVIPTTPRPVPVETVAS NDGIEEAVDAPEDGGEDIPEEDAVCRICLVELNEGGETLKLECSCKGELALAHQECAI KWFSIKGNKTCDVCRQEVQNLPVTLLRIQIRTVNRQPRNGVQQRAAHPHRFWKETPVL VMVSTLAYFCFLEQLLVADMKSRALAISLPFSCLLGIFSSILASTMATDNYLWAFATF QFAFLILFAHIFYNLLKMGAVLAILLASFTGFGIAISLNAMLIEYLRWRLLRNQRLTQ RRNHRHGQSGNNASNENTASNARQQGSGSDQQSAEHG</aaseq>

Gene Sequence

<dnaseqindica>4114..4356#3902..3981#3393..3483#3214..3286#2726..3020#2389..2563#1353..1799#95..154#acctcccttgacttcgactccacacagcagcgacgccacctactctctctctctgtctctcgctctcgccgtcgccgagctagttgagccgcggatggatagccccggtggtgcggcggcggcggcggcggcggcggagtccagcaatcgcgcggtgagattctgcaccccggggatccaattcttgatatttttttgttcttctttagcttgctgtgtgggattctttgtcagcttcaggcttggatgtttccaataggtcatgggagctagtatagtgtctgtatttcgttagaaagatttggatctctgggggtgttctgttttggaattgggttgtcgtttttggctgttttggtggggaatcttgtggattcttcgccatctgttgtttgttgttgccatacacatgcgagctagacatacatagtttatttactcttttagtgttttactctttcgattttgctttgctttagcggtttgagcaggcgttgttaacatgatactgctgtttaattccagttgcttgactgaataactgtcactgatattctgatcaaactgtttcactgaaaccttcataacaaagcgtattgtaatttgtaaagacgtttgcatggccatattagctactgaattcaatattagtttttttctgtcctcaaagattaacccagaaaggctcaaattaggacctagtgctgaatgctgtgactgtcagtcacacagaataaaccaaactactcctatttgagaattaagaaaggcagtatacgcactcactattagtcttggagagtgcactcgtctctgttcatacttgaagatttctgataaactatccagacaggcgtttgtcctactcttacttgcacctatctcgaaataaaagcttccattatctaaaaagatctcttctttgcaccatggtaggagcaccactgcagttcatgcagaaatttagtaaaggccctcttagtttcttgttccatgtctgaatgtgaacacatgcttgataatccctccgtctcataatataagggattttggagggatgtgacacttcctaggactacgaatctggacaggacaagagggagtagaagagtgaagaaacaaacagcagtgatgtggtgatgccaaatgagtatctattcctcgtgttagtatttagtactatgaatatatgatgcaataggcaatggctagtagcctagtacatggttgattcttggcgtttccttgtcttttgttacattgccactctttctttttaatttgcttcaaaccaatcatataattatttaatgtaagtgattgacattgttgttcgattgaattgttactagggagaagatgctaaaagtgatggtgtatcttgtcagaattcgcgacggccaaacctttcattacaaataccaaacagggcatttgatgacactctgccaacgtcaactagaatcaaaatatcacccagcccaaattctgcaagaagtggtttaccaccaaggccgaattcaactagaacaaaatcatccatcaggggcatcattccacaaaggagcttcaaagcaaagagttcattacaggatggtgaccagacaattcttctaattcctgacacaccatcatcatcaggacagcaggtgaaggcaactacatcaagatcattttctttcacaaaggtcatcaactccttatcagcgaagcgaacccactctcttccagttactcctgttgcagcttcaggaccttcttctcatgaaggtcatgcagacaacctgccaagtacagttgtaagtatttaactaggactgcattgtttgcatgctggtctattttggtataacacaattccatggcaagggttgtgggatttaataatacttgacgtaatatgacataatctctactaaaaattgaagatgtttttgccggtattttggtatgtcatccgtatttgagtcggttttatgttcgctcgcttttggtaatacagatccgtttatgaatcggattttaagttcgtttgcttttagaaaaacaaaatgagtcgtataagaaatctctttgagaaaactcgcatactaacttgagataaaaatcagactcctaattgcagctcatgattttctaaaaaaatatatatatccaagcgaatttccacagtgaattttatcctagctaaaccatataacaataataagattataataatcttcacccgttgcagcgtacgggcatttttttctagtacatgtatacagtggaaattaaatggactattatcaaacaaccaaactggtgcatttacaccttaaagtatgagatgcgcccagttcaccgaggatcatctcgtattaatgtggttcacaatggttgcagaagaatgaggttgaaacacaaattaggcgctcactctcagcaccaggaaatcatgatagtaaggatctgaggaggacggcttcatcaggccttatacgtgtgattcccacaaccccacgacctgttcctgttgaaactgttgcatcaaatgatggcattgaagaagcagtagatggtactaaccttggatttttactcttttgcatgtcagtgtacagtacattaggcacaaaacgttttgtagcgcaatcaaagttcgcgtgaaccaaaatgttctcttcaaatagcaaagctgcaggaaagaaacactgaattttgtgtcgttcatccttggtagctcctgaagatggaggtgaagacattcctgaagaagatgctgtctgcagaatttgcctagttgaactcaatgaaggaggtgaaacacttaaattggagtgcagctgcaagggagaacttgctcttgcacaccaggagtgtgcaataaaatggtttagcatcaagggaaacaagacatgcgatgtttgcaggcaggaagttcagaatctacctgtgactttattgagaatacagattcgaactgttaacagacaaccgcggaatggtgttcagcaaagagcagcacatccacacaggtatttcaaaacacacttttttagtgtgaagatattttgacccttataaaatgtgcacactggatgagtgttgttttcttcacgttttatgaatgacaattgttttgttcttttttctgtctatactatgagaaatatcattaatacattaatgtatttgtcttcttgttactaaattctccttttctgacagattttggaaggagactccagttctagtcatggtcagcacgcttgcgtacttctgtttcttggagcaactcttggtttgtgactttgtgctacacttcttttagctttccattatgtgaattttgtgtgtatatgtcaaattaacccaaccactgtcccacttgttggaacttttaacaggttgctgatatgaagtcacgtgcactagctatttctttgcctttctcctgtctcctgggcatattttcttccatcctcgcatccacaatgggtaatgaaatactacttgcttttctctggctctacgcaattgcaaaatcatgagttcagtacattgtgtagggaaccaaaaagccttttggtacctaagctcactgttttccaaattcagatttatttattgaccaccctaccctcatagttagatatatatatatatatcttgattgtgtaacaactttaccagggaaaacaattattatataatatgatttcagcttttcaacagaatgtaaaacataactccttaccgctctttccatgatctcattttaaaaccaaatattagatgttatgtagttacttgatcatttggtgtaaataaactcagattatcatgttccagcatttctgctgaacagctaccgcaattccacatttaaccttttttttttatctctgtgaaacagcaaccgataattacctatgggctttcgctacgttccagtttgctttcctaatcctatttgctcatattttctacaacttggtatggagcttttgccctcaataagtttttttttttttgccctcaataagttttttttttttgacgtaagctcaataagttttctagataatatcttcagcacattgcttattacaattactaaacatgcagttaaaaatgggggcagtccttgcaatcctacttgcatcgttcactggtttcggcatcgctattagtctaaatgcaatgctaatagaatacctgaggtggagactcctgcggaatcaacggttaactcaacgtagaaatcacagacatggtcaatctggaaacaatgcttcaaacgagaacactgcaagtaatgctaggcagcaaggcagcggaagcgatcaacagtctgcagaacatggctgaagatgatccatctgtggttttgcaggtatcatggtgatgataaagtaagtcttgtttgaactttcaagtagagtgaaagatagcagctcatattttttcatcatgaatactcaccttcgtgtagttgctgaattctgcagattcaaaatcaaaagtgttaatgaatgaatggaataaaggcgccactggtaaaaccgcaaatctgcaattccaagaatgccatggccggttgccacctaagttgatcgtgaaacaaagttattattcagaaaaagggggctctcaagtctctcaactctgaaccaaaaaggtccagcagtctccatttactcccggttatagtttagtagtccagtgtgatatgtgtgtttatgaaatgtataaattgcgaaagcaaatactacacaccgacctttgtatcacaaccatgaacaaactgtatatagctcatcgttgtcgattttactttgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0165000, RefSeq:Os02g0165000