Os02g0168800

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Revision as of 02:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0168800| Description = Similar to Porphobilinogen deaminase (Fragment)| Version = NM_001052552.1 GI:115444474 GeneID:4328432| Length = 2885...")
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Gene Name

Os02g0168800

Description

Similar to Porphobilinogen deaminase (Fragment)

Version

NM_001052552.1 GI:115444474 GeneID:4328432

Length

2885 bp

Definition

Oryza sativa Japonica Group Os02g0168800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3715358..3718242

Sequence Coding Region

3715406..3715575,3716303..3716708,3716882..3717085,3717552..3717729,3717833..3717951

Expression

GEO Profiles:Os02g0168800

Genome Context

<gbrowseImage1> name=NC_008395:3715358..3718242 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3715358..3718242 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccgccgagatgcgccgccaccaccgcccaccactccctcctcggctcgcccacctgcctcgcgcgcccgcggcggcggtgctgccccgtgcgcgccgccgtcgccgtccaggccgaggcgcaggccaaggtctcgctcatccggattggcacccgcgggagtcctcttgcactggcacaagctcatgaaacccgagacaagctgaaggctgcacactcagagttagccgaggagggggccgttgagattgtcatcattaagaccacaggagacatgatcttggacaaacccctggcagatataggtggcaagggtttattcaccaaggagatcgatgatgcacttttgcagggaaggattgacattgccgtccactcgatgaaagatgttccaacatatttaccagaaggcacgatattgccttgtaatctcccacgggaagatgtgagagatgcattcatatgcttgactgcaagttcccttgcggagcttcctgctggcagtgttgttggaagtgcttctctgcgtagacaatctcaaattctctacaaatatccatcactcaaagttgttaacttcagaggaaatgttcaaacacgattgaggaaactcaaagaaggagatgtccatgctacattgttggctctagctggactaaaacgcttaaacatggcagaaactgcgacatctgtattgtcagtggacgaaatgcttccagcagttgctcaaggtgctattggaatagcttgcagaagcagtgatgacacaatgatgaattacttgtcctcattgaaccatgaagataccagattagctgttgcatgtgaaagagaattcttgtcagttcttgatggcaactgccgaactccaattgcggcatatgcttctcgtgacaaggatgggaattgttcattccgagggctattggcttcacctgatggatctacagtatatgagacttcgagaactggaccttatgatttcgatatcatggttgagatgggtaaagatgctggccacgagctgaaagcaaaggctggccctggcttctttgatagcttgcaatga</cdnaseq>

Protein Sequence

<aaseq>MPPPPRCAATTAHHSLLGSPTCLARPRRRCCPVRAAVAVQAEAQ AKVSLIRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLA DIGGKGLFTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLT ASSLAELPAGSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLA LAGLKRLNMAETATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAV ACEREFLSVLDGNCRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIM VEMGKDAGHELKAKAGPGFFDSLQ</aaseq>

Gene Sequence

<dnaseqindica>49..218#946..1351#1525..1728#2195..2372#2476..2594#ccatctttggtctcctccccctccctctcgctcgcatcttccccggagatgccgccgccgccgagatgcgccgccaccaccgcccaccactccctcctcggctcgcccacctgcctcgcgcgcccgcggcggcggtgctgccccgtgcgcgccgccgtcgccgtccaggccgaggcgcaggccaaggtctcgctcatccggattggcacccgcgggaggtgatcgcaatcgatccaaccctttttttttcttctccttctctaattctgggtgctgctcgtgtggataagcggtaaaattcgcgtattttaggtgctgaattggtttggatttggggtcgcggtggctgcgagatcttgttttcctctgggaatttgggtgtttgagatgtggctctgacccaattgcgtcgttagatgtcaggcattgcgagcactggtagaattcaggtatagagaattgaggccgtttaccaagatatgtgcctttagcttcgttttgatggaattttggatcagtgataacatgccattgttaacattagtagtgctaaagaatagacttttgttcagttggcaaaagttggacttttagatgtttcccgtacgattgttggtcaacacgacaggttgtattgttcttgcgctttatgagctagctggaagttacatgtgattctttgcacgattctagacattagatgctttttttttctgattttaacttggatctcgtgtaaattttgcatccacattaaactcttatgaggaattcacaagaattgttatggttgctctcttttcaatattgacttgaaagtgactttatggttgcgaaaaagggactttctttcttttctttgtttttaacaattttttcttgtgatagagtagcttatttgagatatgcaagtatgtaattcaaattattggctgtataggacagtcctcttgcactggcacaagctcatgaaacccgagacaagctgaaggctgcacactcagagttagccgaggagggggccgttgagattgtcatcattaagaccacaggagacatgatcttggacaaacccctggcagatataggtggcaagggtttattcaccaaggagatcgatgatgcacttttgcagggaaggattgacattgccgtccactcgatgaaagatgttccaacatatttaccagaaggcacgatattgccttgtaatctcccacgggaagatgtgagagatgcattcatatgcttgactgcaagttcccttgcggagcttcctgctggcagtgttgttggaagtgcttctctgcgtagacaatctcaaattctctacaaatatccatcactcaaagtaagtacaatgaccactttaatgacagttacagtatgcgttgtagatttctattgtgaaagggtggtgttccatttcaacttcgtaaaaatatgactagttcaggatatgcaatgctagattcacattggttaatgtaggtctaggttctaatgttagtgaatgcttttcaggttgttaacttcagaggaaatgttcaaacacgattgaggaaactcaaagaaggagatgtccatgctacattgttggctctagctggactaaaacgcttaaacatggcagaaactgcgacatctgtattgtcagtggacgaaatgcttccagcagttgctcaaggtgctattggaatagcttgcagaagcagtgatgacacaatggtagggatctaatgttttaatttgctagtagattaaagaaaatcatagagtctgcattcataatgccatacccaaatctgaactgtgctaccttttaattctggtaaggtgacaagttcaagcacctctagcctttttttttcttctgttctcagctgtggcacatcatgctgttaaaaaatgacagatgattgttcacaaatctgatgaccttgtcaaccaacgcttcacattttcatttacctactccagccttgatccatttgtttgttgctctttatcctgatcatgctgcatattttgaatattttaacacctgatagactcaaaaataaaatctattagaatattcttaatgcctggcctcctgtacagctatgcagaatgtgccaactgcttgcatgatctgtttcatttttatgcactgaagctagataatgaggctcttttgtccttccttctgcagatgaattacttgtcctcattgaaccatgaagataccagattagctgttgcatgtgaaagagaattcttgtcagttcttgatggcaactgccgaactccaattgcggcatatgcttctcgtgacaaggatgggaattgttcattccgagggctattggcttcacctgatggatctacaggtacccttttttgttcaataaaatctatgatgatacaaaacagctatattttatcatggaattaaaatgttttcttttttttggtgtgtgatgctgcttacagtatatgagacttcgagaactggaccttatgatttcgatatcatggttgagatgggtaaagatgctggccacgagctgaaagcaaaggctggccctggcttctttgatagcttgcaatgaaaatagaaatccaccattggccaactagagtgttgagtggattattttgatttttttttgtaccctagttctactagaggattgtaccacaatgttgagctgtctcattcagatctgtatctttgcttcttttagcaaggtgagctagaatttagaacgtggttccacggttattgtaatcccttgtatttccaatgaattctggaagaggcttttgcggccaattatgttgtaactttgtaatttgatgtaattttgcagatgctttgttttcaaaataatttgattctg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0168800, RefSeq:Os02g0168800