Os02g0170500

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Revision as of 02:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0170500| Description = Histone-fold domain containing protein| Version = NM_001052564.2 GI:297598659 GeneID:4328444| Length = 3945 bp| Def...")
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Gene Name

Os02g0170500

Description

Histone-fold domain containing protein

Version

NM_001052564.2 GI:297598659 GeneID:4328444

Length

3945 bp

Definition

Oryza sativa Japonica Group Os02g0170500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3846180..3850124

Sequence Coding Region

3846489..3847268

Expression

GEO Profiles:Os02g0170500

Genome Context

<gbrowseImage1> name=NC_008395:3846180..3850124 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3846180..3850124 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaccatcctcacagcctcagcctgtgatgggtgttgccactggtgggtcacaagcatatcctcctcctgctgctgcatatccacctcaagccatggttcctggagctcctgctgttgttcctcctggctcacagccatcagcaccattccccactaatccagctcaactcagtgctcagcaccagctagtctaccaacaagcccagcaatttcatcagcagctgcagcaacagcaacagcagcaactccgtgagttctgggctaaccaaatggaagagattgagcaaacaaccgacttcaagaaccacagcttgccactcgcaaggataaagaagataatgaaggctgatgaggatgtccggatgatctcggcagaagcccccgttgtcttcgcaaaggcatgcgaggtattcatattagagttaacattgaggtcgtggatgcacacggaggagaacaagcgccggaccttgcagaagaatgacattgcagctgccatcaccaggactgatatctatgacttcttggtggacatagttcccagggatgaaatgaaagaagaagggcttgggcttccgagggttggcctaccgcctaatgtggggggcgcagcagacacatatccatattactacgtgccagcgcagcaggggcctggatcaggaatgatgtacggtggacagcaaggtcacccggtgacgtatgtgtggcagcagcctcaagagcaacaggaagaggcccctgaagagcagcactctctgccagaaagtagctaa</cdnaseq>

Protein Sequence

<aaseq>MEPSSQPQPVMGVATGGSQAYPPPAAAYPPQAMVPGAPAVVPPG SQPSAPFPTNPAQLSAQHQLVYQQAQQFHQQLQQQQQQQLREFWANQMEEIEQTTDFK NHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQ KNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGLPPNVGGAADTYPYYYVPAQQ GPGSGMMYGGQQGHPVTYVWQQPQEQQEEAPEEQHSLPESS</aaseq>

Gene Sequence

<dnaseqindica>2857..3636#gtccttctgacccaagggcgaccgcgtctccctctctctctctctctccgccgccgacgccgagggctccacgagagggaggtgggcggcgcggcccttcgccggagggagcgctctccgccgccgccgctcccgctcccgccggcgcgggagatccgggcgtcgtctctcggtaagccccgcctcccgccacctttcctcgatctctctgttcccaattccgtgggtgatcccgtttggattgttggctgcatgcgtgggttgggtgttgctagcttgggggggggggaattctctctcggctcgtagctgagggaggaatcatcgcctctgtttctagggctgtggagctgatcctggcagcatatggttaggtttcgattagtcgtcggcttcgtttcgattgcttgatcctgcttagttctagtttggatttttagtttgctatatgtgtggagagacgtgcggtctcgtcttggtaaatttgtgttcatgagtgttgagttggtcccgtgtcatggccgccttgccactgcccagaattctaaccctagcttgtttgccggagttcatgagctcgccggagaggcggagggtttgtagttgctggtgtggtggcgccgcgccggagccttggaaggagctgctgtagaggagaattaggtttgatgttctctttgatttgggaatggagcttactaactagtgaaatggagcttcaaagaagtgagataaccaagatgccctccttcaccatcgcgatcgtactctcctctgtttccgatctgcagtgcgagctggagttcctcgcctgcgtgactagcaagaagcacggtgtggatggatgaccaccctggccttgccccgtgttaggtccgcacctgcatcttcttgtaagaacagtgggtcaactcgtaggaaaccattaccatggtcagtgatgatggattgctgacgcgcgcttaacgtagttctgccacgagtgcaaacttcctagatgcaagagtactgttctgatgccacatctaaatttgtttattttggtgttgttttcatactgttaggatctcatgatttgctgtctagatgttctgtcaaaacagggcactcctaatttcctaccattcgttgcattgttttttcatgaagtgatatgatgattttctcttggagtgatattttctcttagtgatggatcataattacatgatcacccacatcgcgtatgtgttaggacgctgctctcttctctttttttttccctaaaaaaagacgtgattggtcccatgcatttaatgagtctgagttttggaatgtatctaaatttgcctttttctgtgttcaaatgtcacgtgacatgatacgtgccaactttccttgtttgtcccaaatgtgtggacctcctggaactacaagattgacatattcttcaaagaatccaattaaggtagttgcaccccaaccttaagcttaacctgacagcactttattttagtactgatggtgtgtcaaacagagagtaagatggcaatttggatcacttggcttcttgatatgttgttcaaagttaataatgacatagcggatcatttttaacatttcttacatatttaagtgtgcattttttttcctacttgcttgaatgttgtagtcttcttttacacacacttctggttgacatggaaaaaaatatttatgagatttggcatctgggtgtcatagacttaattcggtttgatgtaagtagatgagatgctgcgagtaaattaggaggaacacatagccatggtatgaactgccctgccatgacagctgcaactgcagctgggtaactacaccaaatccaggccatccttggagtgttggatatccaacagtagaggggagaaaaaaagccttgactagaaatacaattcattccgtattttcccatctcccatctcagttatccaaacattgatttgtcagtcaatgagctaaaacctgtgcaattggcttggaactagccgatctgtgccctctggacacaaatgccatcattctgggagactaataagtcataactggagccatgggggcatagctaccttttgtgggttatctttgggacctgcttctaccggaaaacatcaagacatgtgatttatgctgtacatgcatgagaagcttcaaactctgtatgatgcatacttatccatgttggtttgtaatagcagcccacaaattcacttgtccgtaaccagtttgaccgataatggcagggcttgaatgttcatgcaactacccacttgcacaatatggatagtaggagtacaaaaggtaatttaccatcccatcacaaatcatagggatgattttaatggaaggttctactttctgtttagcttgcacatgttctatcacatatactggtagttatgcatctgtaattctattccacattcaatggaagtctctttctgtttagaatgcttaatgaaccaatagagatgaaagtattgagatcatgagttgtgcttaaagtgcaacagcaagctacatggaaccgcagcactcaagttgctcattaattgtactataagcaacaaaagtcgcaatcaagttgcctttgttccttcaatcatttttttccctgcatgcaagtttgtatgtcagatacaattttgtaaaggaaaagcagtgagttccattcttataccaaggtattctcactcatgtgtattgtatttgacaaaatacaaatttagaacctatcatgatctttctcgttaatctatacaaaagatcaactgatcaatacttgcaactgtttcccacaacgacagggcctttggctttggacggacaagagctgacatggaaccatcctcacagcctcagcctgtgatgggtgttgccactggtgggtcacaagcatatcctcctcctgctgctgcatatccacctcaagccatggttcctggagctcctgctgttgttcctcctggctcacagccatcagcaccattccccactaatccagctcaactcagtgctcagcaccagctagtctaccaacaagcccagcaatttcatcagcagctgcagcaacagcaacagcagcaactccgtgagttctgggctaaccaaatggaagagattgagcaaacaaccgacttcaagaaccacagcttgccactcgcaaggataaagaagataatgaaggctgatgaggatgtccggatgatctcggcagaagcccccgttgtcttcgcaaaggcatgcgaggtattcatattagagttaacattgaggtcgtggatgcacacggaggagaacaagcgccggaccttgcagaagaatgacattgcagctgccatcaccaggactgatatctatgacttcttggtggacatagttcccagggatgaaatgaaagaagaagggcttgggcttccgagggttggcctaccgcctaatgtggggggcgcagcagacacatatccatattactacgtgccagcgcagcaggggcctggatcaggaatgatgtacggtggacagcaaggtcacccggtgacgtatgtgtggcagcagcctcaagagcaacaggaagaggcccctgaagagcagcactctctgccagaaagtagctaaagatgatacagtgaagttgtgacattgatatacattgtcctgtgaacttagggcctctaaaactcagtgctcttgtcaaaactattcccatgattgttggctgaaacgggtaatctgattaggtcttaggctttcctaatgttagttctgctctgctatggcagcagtagaaaaaaaaaagattgtgatttggtaggtgatttgcaactaatgtagtaactgtaccttacctttcatcagtttctaatccaatactcaaaagtgctggcatgtggagacccttgtatgaattgagtgtttgttcatgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0170500, RefSeq:Os02g0170500