Os02g0172800

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Revision as of 02:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0172800| Description = Similar to Zinc-binding protein| Version = NM_001052569.1 GI:115444508 GeneID:4328449| Length = 3716 bp| Definition...")
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Gene Name

Os02g0172800

Description

Similar to Zinc-binding protein

Version

NM_001052569.1 GI:115444508 GeneID:4328449

Length

3716 bp

Definition

Oryza sativa Japonica Group Os02g0172800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3971428..3975143

Sequence Coding Region

3971675..3971845,3973791..3973865,3974129..3974608

Expression

GEO Profiles:Os02g0172800

Genome Context

<gbrowseImage1> name=NC_008395:3971428..3975143 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3971428..3975143 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatgaggccgggttgggtaggcgggctggtggaggagagcttcttcgtgggttgcccagcgcacgagagccggaagaagaacgagaagaacatcttctgcctcgcctgctgcaccagcatctgccctcactgcgccccctcccatcgccaccaccctctcctccaggtgcggcggtacgtgtacaatgacgtcgtccgcctcggcgacctcgagaagctcatcgaatgctcctacgtccagccgtacacgatcaacagcgcgaaggtgatattcctgaagccgaggccgcagtcgaggccgttcaaggggtcaggcaatgtgtgcctcacctgcgaccgcatcctgcaggagcccttccacttctgctccctctcctgcaaggtggaccacgtcatggtccacggtggcggcgacctctccaacatcatcctcctccacccccaccaccaccccaacaccgccaccgcctcggccttcccccgtttcgaggacctccgtgtcggcgctgacgatgatgctgccgctatcaccgccgtcacgccagaaggacgttatggtggcggcggtggtgggtctagtgataatggcggcggtgatggcggtggcggcgaggtgggggaggtgaagaggaagaagaagaaggggggagggttcttcccccagattctggggctggggagtaggaggaagggtgcaccccacagatcacccctgtcctaa</cdnaseq>

Protein Sequence

<aaseq>MGMRPGWVGGLVEESFFVGCPAHESRKKNEKNIFCLACCTSICP HCAPSHRHHPLLQVRRYVYNDVVRLGDLEKLIECSYVQPYTINSAKVIFLKPRPQSRP FKGSGNVCLTCDRILQEPFHFCSLSCKVDHVMVHGGGDLSNIILLHPHHHPNTATASA FPRFEDLRVGADDDAAAITAVTPEGRYGGGGGGSSDNGGGDGGGGEVGEVKRKKKKGG GFFPQILGLGSRRKGAPHRSPLS</aaseq>

Gene Sequence

<dnaseqindica>248..418#2364..2438#2702..3181#acattctcctctctctctctccctctctcatccatttcaattctctctcttgacacagctacaagacaagccacctcctccctccctcctctactgaaccaagaagaggagagagaaagtagaggagagggagacaagcagacagacagaattgcctgccaagaaacgagatacacacacatctagagagagaaagtagagagagatcaagaacaagaacaagatcaagaagaggagatctgtggcgatggggatgaggccgggttgggtaggcgggctggtggaggagagcttcttcgtgggttgcccagcgcacgagagccggaagaagaacgagaagaacatcttctgcctcgcctgctgcaccagcatctgccctcactgcgccccctcccatcgccaccaccctctcctccaggtttcactaattaatccccctcccccctccttaattctcccctcccatcgcttaatcacgcatgaatcaagaaccatcatccacccagttctttgtcttcttgttgctcacttctttgcatgcatggtctgattttcttgaaaaaggaatggagtgtgtgtgttttttttacctgttcatgcttgaattaattagtcttttcttggagatttggtaggaggagtgaattgatcgattgattatgagctactaatgagagagatagtagtagaggccaagaggagggggtggtgtgtatcttgctttttgttttgtcctgtgctgtcttttcaagtgctgttcctttcctcacctttcttgttctcttctctccccctggattgattagattttggattaagactttgaacactttttgttgatttgcatactagtgggatgatgatgatgcttctcctctcttttgggattatatgtgttattattatttgctaatcttggatgtacttttgcttggttcttcaccattgtcgtcttgtgagcttttggggggttaattctgccaccatttgaggccttgaatttaggggggttgttcatgatgttgattgcgtcctgtaattagccacactcacaatctgatttgtgcaacaatttccatataaacttcgtggataattcttggttctactaatacaccttccttgatctttggcactagatgtagtaatttaattgtggttaaaactgacctaggtaactcattgtgtgggtgaaaggtgggagtagtatagaaattaattgtgattgagattctcttgttgcattacatgcaaatatgcaagagcaaatctgcttcatttaatttgttccttcaatttttttttgccttcaatttgttccttcaattcggatttgtcctcttcctgccacttcctttccctgcatgcatttcattcaactaactcgggtcagtaaaatttgttgggggtgaggtgagtagtaataactccgatgtgaagaggtttgggggataaaaaagctgtgtgagtttttactgcttcacctttggccttacacttgaaatgggcatagtgccatagccttttcacatgttgaattcttctttttcttgtgtcaatttacctacaaagttactagtagtacaagtcacttcaattttcaaaaaattggcaaaaactgattaggtataattgtactaacagtggcaaacaaattctgaaaaagaatcatctgatggggggggggggtttaggagatttcctttaataggccaggttatccaaaatgtcttgccatgaatagatagaaacacacactctctcatagagaatccctgatcccttactgcctctgcaaagcaatgtgtggtggtaaaaaaaaattaaagaaaagaaatggggataatatggcatcatcttagaattgttactgccagaatttaccatatgtgtgtggtgtggtaaattggcgaccttgtctttttttaccaaagaaaggctcaacactgttgttaccccctgcaactgcaaccgtccagtgggccccaccccctccctctgctggctgatactgttcatcaaagccacagtgaactaaccagtgacctcctcctcccaaaattttcttttcatatctcaaaatttttctttcttttcactgctccatatccattggctggttgtgcttcgttgaggatttgacgtttctgccctttggttctgggattattgagctgcacggggcaggggcatttcggtcattttggcaacccccctcccggtcaaagcatggccctgctttcgtacgtactaccagctgcagcagcgtcctattagaagagcctagcgaagtgttagcagtagctgcacgaatcttaaagcacccggatggcctaatcggacggtgttggtgttccccacaggtgcggcggtacgtgtacaatgacgtcgtccgcctcggcgacctcgagaagctcatcgaatgctcctacgtccaggtgattagctactgatcactacttctaattaatcactcatgttccatgtaaattactccctttgtctccaaaaaataacggattttggaaggacgagatatttcctaatactacgaatctaaacaggctcttgtattattagaaagtgtcacatccctccaaaatttcttatattatactaatgatgtcgaagtaggatagagggagtacgttgattagtgatgtgctaatgatctgtaattaacgtactaatgtgggtgcagccgtacacgatcaacagcgcgaaggtgatattcctgaagccgaggccgcagtcgaggccgttcaaggggtcaggcaatgtgtgcctcacctgcgaccgcatcctgcaggagcccttccacttctgctccctctcctgcaaggtggaccacgtcatggtccacggtggcggcgacctctccaacatcatcctcctccacccccaccaccaccccaacaccgccaccgcctcggccttcccccgtttcgaggacctccgtgtcggcgctgacgatgatgctgccgctatcaccgccgtcacgccagaaggacgttatggtggcggcggtggtgggtctagtgataatggcggcggtgatggcggtggcggcgaggtgggggaggtgaagaggaagaagaagaaggggggagggttcttcccccagattctggggctggggagtaggaggaagggtgcaccccacagatcacccctgtcctaagcctaatcaccactttgcccccctagctacatatatgtgccattaatagcagctagctgttaattaattactagtagtagctaagctagcccctagctgtactagctagttctagcttttagtgtgtcatgtcattatagccctatgattagccatgtagagagagatgagtgtgtgtgttaatttgtgtgttggttggttggttggatgggttctttgggaggtaggggcttttgtttgtgtgatctagcttagcttaaggttaattagcttagctagggccacttccaagctaataggcacttaggcagtgttttgatgggagacagagagggagggagaaagagaggaaaaaagcaagcaattctcctactgttacaggcctaggtagctgagtcacaggtatgtggggcccaggttgcatggcttcccctacatgatagtgtgtggctaccaattttgtacttgatgtaacagcagggttacttgcatacacttccataaccacatatataattaattaatatcgttcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0172800, RefSeq:Os02g0172800