Os02g0175100

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Revision as of 02:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0175100| Description = Similar to Transcriptional activator protein| Version = NM_001052588.1 GI:115444546 GeneID:4328469| Length = 2910 bp...")
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Gene Name

Os02g0175100

Description

Similar to Transcriptional activator protein

Version

NM_001052588.1 GI:115444546 GeneID:4328469

Length

2910 bp

Definition

Oryza sativa Japonica Group Os02g0175100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4109767..4112676

Sequence Coding Region

4109812..4110042,4110989..4111097,4111404..4111563,4111721..4111796,4111984..4112109
,4112233..4112484

Expression

GEO Profiles:Os02g0175100

Genome Context

<gbrowseImage1> name=NC_008395:4109767..4112676 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4109767..4112676 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tctgtctcgccggggcatctcgaaaagcatccgactccgacgccgccgcgcgccaccacccggccgatcgccgacgccgcagccgctggaagcagcagggacgacggagaatcggagatggacatcgaggcgttcatccacggcggaagcgggggcggcgacgccgacgccgaccacccgctcggcatcttctccgccgccgacctctccggcttcggcttcgcggactcgagcaccatcacagggggcattcccaatcacatatggccccagtcccagaacctgaacgcacggcatcctgcggtctccacgacaattgagtcgcagtcatcaatctgtgcagcagcaagtcccacatcagctaccaatctgaacatgaaggagagccaaactctgggaggcacaagtggttcggattctgaaagtgaatcgctgttggatatagagggtggtccatgcgaacaaagcacgaacccgttggacgtgaagagagtgagaaggatggtgtccaatcgggagtctgctcggcgatcgaggaagagaaagcaagctcacttagctgatctcgagtcacaggttgaccagctccggggcgaaaacgcatcgcttttcaagcagttgacggatgccaaccagcaattcacaacttctgtcacggacaacagaatcctcaaatcagacgttgaggccctccgggtcaaggtgaagatggcggaggacatggtggcgcggggggcgctgtcgtgcgggctcggccacctgggcgggctgtcgccggcgctgaacccccggcaggcgtgccgcgtccccgacgtgctcgccggcctggactacgccggcgacgaccccttcacggccgggctgtcccagccggagcagttgcagatgcccggcggcgaggtggttgacgcctggggctgggacaaccaccccaacggcggcatgtccaagtga</cdnaseq>

Protein Sequence

<aaseq>SVSPGHLEKHPTPTPPRATTRPIADAAAAGSSRDDGESEMDIEA FIHGGSGGGDADADHPLGIFSAADLSGFGFADSSTITGGIPNHIWPQSQNLNARHPAV STTIESQSSICAAASPTSATNLNMKESQTLGGTSGSDSESESLLDIEGGPCEQSTNPL DVKRVRRMVSNRESARRSRKRKQAHLADLESQVDQLRGENASLFKQLTDANQQFTTSV TDNRILKSDVEALRVKVKMAEDMVARGALSCGLGHLGGLSPALNPRQACRVPDVLAGL DYAGDDPFTAGLSQPEQLQMPGGEVVDAWGWDNHPNGGMSK</aaseq>

Gene Sequence

<dnaseqindica>46..276#1223..1331#1638..1797#1955..2030#2218..2343#2467..2718#gcgatcaacacaaaaagcttctctttcccttctcctcctcggtgatctgtctcgccggggcatctcgaaaagcatccgactccgacgccgccgcgcgccaccacccggccgatcgccgacgccgcagccgctggaagcagcagggacgacggagaatcggagatggacatcgaggcgttcatccacggcggaagcgggggcggcgacgccgacgccgaccacccgctcggcatcttctccgccgccgacctctccggcttcggcttcgcggactcggtgagtgattgattactgattattatgctgcctgctgcgactacgtagtatagtagtagtagtagggtgtgttttcacgccaaaattgaaagtttggttgaaattaaaacgatgtgacggaaaaattagaagtttgtgtgtgtaggaaagttttgatacgatggaaaagttgaaagtttgaagataaaatttggatctaaactgggccgtagtattaaattcgtgtgctaaaattaagttgaacacttgctgtattggatagcttgcagtagcacgtacggtgcttgtatatgcgtttttttagaaacgtgcttgtatatgcttgactagagtttcatgtctgcgaaattttcgttaattgctgctgatcagctgactcctactacctttctcaagtagaagactgttggttcatcctctaccatttttttacttgtacagtaatttttcatagttggtacgcaagtactccctccgacctccaatccaatatactcatatacttacgtgcaacttaatgcgacatatcctaatactatgaatatggatagacagtaataaatttactcttactaggagttttttttccccgattatatggaagacacacatcacaacacaagcacaccaaacttgcacaattttagttcgcgaacgaatgatgtcttgtgttttaaaagaatttatttgaatagcccgataagaggaaatcatgaattctaaagcatggaagaggagaaaccattttaggttaacagcataacatgagagtttccgttgtcatgacagggtttgattaagttggtattaaggactggtgataagtaattcttttcatataaggaagatgattacaagccctggttgcttatcttaaatcgtacttgattcttgatttgcatgattgatcactcgattaattttacttatatttttgtccaagcagagcaccatcacagggggcattcccaatcacatatggccccagtcccagaacctgaacgcacggcatcctgcggtctccacgacaattgagtcgcagtcatcaatctgtggtacggcctcacactcgtcatcttccacgattttcatcaattattcataagactgcaacaatttgcacacaaaaatacttgttgttcgatgtactcaatgatttgctactgtattgcacactgaaaagcacatgcaacttggatttttcaactcatggagatttcagcgatggacatccatggacagtaccagtgctgttactgtgtcatgtactgcatcaaaattgtgtttattgatgaggcacaaacaatgttcagtttatttaattgttcttgctcactctctgttcaattttctgtaatcagcagcagcaagtcccacatcagctaccaatctgaacatgaaggagagccaaactctgggaggcacaagtggttcggattctgaaagtgaatcgctgttggatatagagggtggtccatgcgaacaaagcacgaacccgttggacgtgaagagagtgagaaggtattccaagaacataagcgactatgtcaagcattttgtctgtcactgcgtgaaaaattatgggcatattcgctagtagtagaagttgaacattgcttttcagaaggaatgtttgacaaagaacttgcatgaaacggttgggggcttcaaattacaggatggtgtccaatcgggagtctgctcggcgatcgaggaagagaaagcaagctcacttagctgatctcgagtcacaggtaaactgatatgatctgaagttttgtacctgccgaacatttgccattgttcaattcaaacagtaacagattgattcgactaacaaatcatgtgccaattggtagctgtaattctgagtcaaaatgcgaaatgctagtgccggttctttcagatttccatagctcaaatcatgctcttgtttgtcaggttgaccagctccggggcgaaaacgcatcgcttttcaagcagttgacggatgccaaccagcaattcacaacttctgtcacggacaacagaatcctcaaatcagacgttgaggccctccgggtcaaggtgatcattcatctccatcttcatctgcacattgcattgctcatcactgtagccatcgtcaaatccgtcctgcattttcggccggtttctgagctctgaattcgtccccgtttgtaagtgcaggtgaagatggcggaggacatggtggcgcggggggcgctgtcgtgcgggctcggccacctgggcgggctgtcgccggcgctgaacccccggcaggcgtgccgcgtccccgacgtgctcgccggcctggactacgccggcgacgaccccttcacggccgggctgtcccagccggagcagttgcagatgcccggcggcgaggtggttgacgcctggggctgggacaaccaccccaacggcggcatgtccaagtgaaactactggtcctacttctatgtcagctcagctacgtttgaaacgtgatgtgtccaagtgaacggacttgagtttttcagagtcctcgtgtcgaagtgtcatgcactcttccctattcctgtaatagaactgactagctaagagactgaaagtctgaaactacgaagtataaatgtggtggaatttggaact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0175100, RefSeq:Os02g0175100