Os02g0175900

From RiceWiki
Revision as of 02:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0175900| Description = Conserved hypothetical protein| Version = NM_001052594.1 GI:115444558 GeneID:4328475| Length = 2702 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0175900

Description

Conserved hypothetical protein

Version

NM_001052594.1 GI:115444558 GeneID:4328475

Length

2702 bp

Definition

Oryza sativa Japonica Group Os02g0175900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4144340..4147041

Sequence Coding Region

4144488..4144649,4145770..4146885

Expression

GEO Profiles:Os02g0175900

Genome Context

<gbrowseImage1> name=NC_008395:4144340..4147041 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4144340..4147041 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattcccttcttgccaactacgcctcttccgacgacgaggccgacgaaaccctacccactcctcccgccgccgccgcggcccgaccgaagccgccctccggtggcggcatcttctcgtcgctcccgcagcccaagtcggcgctcctcttctcctccctcccggcgcccaaatccgggcccgtcttctccgccatcccgcctcccaagtcctcctccgggaaccctaagcgggtcgtgcagttccgcccgcctccgatccgccagcccacgggcgagagctccgacgaggaggacgacgacgccgagaagcgccgccctagcgaggccgagccgcgcccgcccgtatccgcgggcacggggcctgtctcttcgttcctcccgccgcccaagcgctccctcgggctcggcggtggcggcgccgccaggaggtcggccatagacaccgctgcgccggagaggtcgaatgttgtcgccgctggtccatcgtcctcggccgtcaacgcaattgcccccgaaaggcctgatactacctctgccgatgatgaagacgatgaatcgaatgggagcagcgatgacgatgagatgcctgtgccggaggagcagcaggagcagctcgctgttgattccgaagctggacagcagcagcagaatcagcagcaaagctatgatgctggagttgggagcagtaatggacaggaaggctacgcatgggatccaaattactacgccaattacggtgcaaactatggctgggatccgagcggcaatgtgaactatgggactgaagcgcagtatgcggcatatggaggagagcacggtggagtgtatggaaatacatacggagtagaacatggtgatggatatgggcattcgacggaaatggcatatggagggggctatgctggtgggtacgaacataatgcggctgcagcgacagcaccgccaatccagcagccaatactgccaccggaggttggtaggattggagggaagagaggtaggagcgatatgccggcagagattttagaggttaaccaggcagagctgatgaagaaccgaccgagggaggataagtccaagctcactgggatggccttcggccctagttaccagcccgccccttcagcaaaaggaaagccctccaagctgcacaaaagaaagcaccagattggttctctattctatgacatgaagcaaaaggagatggagcttgccgagaggcgttccaagggattcctcacaaaagcagagactcaagcaaagtatggatggtga</cdnaseq>

Protein Sequence

<aaseq>MDSLLANYASSDDEADETLPTPPAAAAARPKPPSGGGIFSSLPQ PKSALLFSSLPAPKSGPVFSAIPPPKSSSGNPKRVVQFRPPPIRQPTGESSDEEDDDA EKRRPSEAEPRPPVSAGTGPVSSFLPPPKRSLGLGGGGAARRSAIDTAAPERSNVVAA GPSSSAVNAIAPERPDTTSADDEDDESNGSSDDDEMPVPEEQQEQLAVDSEAGQQQQN QQQSYDAGVGSSNGQEGYAWDPNYYANYGANYGWDPSGNVNYGTEAQYAAYGGEHGGV YGNTYGVEHGDGYGHSTEMAYGGGYAGGYEHNAAAATAPPIQQPILPPEVGRIGGKRG RSDMPAEILEVNQAELMKNRPREDKSKLTGMAFGPSYQPAPSAKGKPSKLHKRKHQIG SLFYDMKQKEMELAERRSKGFLTKAETQAKYGW</aaseq>

Gene Sequence

<dnaseqindica>2393..2554#157..1272#atcatccaccccgacctccgcctccgcctccgcccgccgccgacgactctccgactcccactccacctccaatcgaaccccacccgccgccgccgccggaggcgtctacccctgctctcctcccccgcgcgccgccgatcgaatccgcaagccgcgatggattcccttcttgccaactacgcctcttccgacgacgaggccgacgaaaccctacccactcctcccgccgccgccgcggcccgaccgaagccgccctccggtggcggcatcttctcgtcgctcccgcagcccaagtcggcgctcctcttctcctccctcccggcgcccaaatccgggcccgtcttctccgccatcccgcctcccaagtcctcctccgggaaccctaagcgggtcgtgcagttccgcccgcctccgatccgccagcccacgggcgagagctccgacgaggaggacgacgacgccgagaagcgccgccctagcgaggccgagccgcgcccgcccgtatccgcgggcacggggcctgtctcttcgttcctcccgccgcccaagcgctccctcgggctcggcggtggcggcgccgccaggaggtcggccatagacaccgctgcgccggagaggtcgaatgttgtcgccgctggtccatcgtcctcggccgtcaacgcaattgcccccgaaaggcctgatactacctctgccgatgatgaagacgatgaatcgaatgggagcagcgatgacgatgagatgcctgtgccggaggagcagcaggagcagctcgctgttgattccgaagctggacagcagcagcagaatcagcagcaaagctatgatgctggagttgggagcagtaatggacaggaaggctacgcatgggatccaaattactacgccaattacggtgcaaactatggctgggatccgagcggcaatgtgaactatgggactgaagcgcagtatgcggcatatggaggagagcacggtggagtgtatggaaatacatacggagtagaacatggtgatggatatgggcattcgacggaaatggcatatggagggggctatgctggtgggtacgaacataatgcggctgcagcgacagcaccgccaatccagcagccaatactgccaccggaggttggtaggattggagggaagagaggtaggagcgatatgccggcagagattttagaggttaaccaggcagagctgatgaagaaccgaccgagggaggataagtccaagctcactgggatggccttcggccctagttaccaggtaccgagtcagcttgttatgatttctacttagcttgcagcattattgttatgttcgattatttttctggcaagtatcacatgtagtacataataggatgagatttctagagtagctcactctcttgccagtaactgtaatcttttatccattactatgactggttagagcacccgacactgtagttattcctacaaatggtttgttggtaccaagataattggcttattggttaagcgatacagtagtatttatttgacttgcttgtgatcagtttagaatgctgcaagctcccaagcaagtatttattggaggacataggcagaatcatgatacagtggttctttcttattgtaattttgcagttcattatgtcagccatattattgattgctgataacctctgtaaggacataatttgataattatgttacttatggttcatacagcgtttctgttggtgggtgcctgggtggtggctttatgctatttgcatgtactattaataacatttgatctacttttatttggccagtgactgtaggctagatctggttctgtataaaaggtttaaattatagtgggtggaaagggtattaggttaacttatgtacatatggaacatatatcacagcttcccagtgtgaactataggatttcagttggaaagcaataggagtgatgttttttgcagatccaacatcccttatcagtgaccaacaatcttagttattacttcctccgtttcacaatgtaagttattctagcattttccacattcatatagttatatctagattcattaagaactatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtaattaacattgaaatgatggtggaaaggaaatttgtcaaaaaagatggattctataagtttccaacatgattaaagttgcaattgccataaggtgtttatatgtcatcatgtccaccgttagtttgaaaagatctaaattgtgagtgagcatcatgagctcataagtgataagatatcatttttgaaaaaccaaaccatatttgcatcgctaattaagtaaggatcgttctaacccaagatttctatcttgaacgcagcccgccccttcagcaaaaggaaagccctccaagctgcacaaaagaaagcaccagattggttctctattctatgacatgaagcaaaaggagatggagcttgccgagaggcgttccaagggattcctcacaaaagcagagactcaagcaaagtatggatggtgagcatggtacgtcgggcataggatggaattgaacagtgtatttcggttttgttgtctaattattttgttgtaaattgttcttgataatataaactggaatttaaaactagtcgttggaagcaaccttttgcaccattcgatggggaact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0175900, RefSeq:Os02g0175900