Os02g0176900

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Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0176900| Description = Aldose 1-epimerase family protein| Version = NM_001052600.2 GI:297598684 GeneID:4328481| Length = 4647 bp| Definiti...")
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Gene Name

Os02g0176900

Description

Aldose 1-epimerase family protein

Version

NM_001052600.2 GI:297598684 GeneID:4328481

Length

4647 bp

Definition

Oryza sativa Japonica Group Os02g0176900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4218950..4223596

Sequence Coding Region

4218950..4219014,4221048..4221167,4221339..4221438,4221525..4221627,4221896..4222036
,4222162..4222319,4222414..4222470,4222752..4222826,4223501..4223596

Expression

GEO Profiles:Os02g0176900

Genome Context

<gbrowseImage1> name=NC_008395:4218950..4223596 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4218950..4223596 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcggggtgtcgtccgtggaggtcgtgaaggacggcgccactgggctggagaagctcgtcctgcgcgaggcccatggctgctccgtccaggtatttctgtacggaggccaagtgatcttttgggaaaatgaatatcgagaacaactgctctttgttagtagaaaggcttatttcaaaccaccaaaggctattcgtgggggcatacaaatttgctttcctcaatttgggaaccatggagttcttgaacaacatggatttgcaaggaaccgattatggagtgttgatgaaactccccctccttttccagctaccacttcaaactgtcatattgacttgatactcaagcagtccccagaagatttgaagatctggccgcatagttttgagtttaggctgcgagttgctcttagccctacaggagatctgatgctcacatctcgaataaaaaataccaatgcagatgggaagccattcaaatttggattttcatataacacatatttttcagtctctgacatcagtgaagtacgggttgagggtttggagaccttggactacattgacaacctgcaatgtggaaaacgttgtactgaacaaggagatgccgttgtattcgaatctgaagcggagaaggtatatttgagtgctccacccaagattgtgatcattgaccatgacaagaagagaacttttgagttaaggaaagagggacttcctgatgttgttgtttggaacccatgggacaggaaagcaaaaacgatactggattttggggaggaagagtacaaatgcatgctatgtgtaggggctgcaaatgctgagaagccaattacattaaggcctgctactgctaggctagctagtagttcgcttgatcgcttgatcgaggcagatgagctgcatttctga</cdnaseq>

Protein Sequence

<aaseq>MAGGVSSVEVVKDGATGLEKLVLREAHGCSVQVFLYGGQVIFWE NEYREQLLFVSRKAYFKPPKAIRGGIQICFPQFGNHGVLEQHGFARNRLWSVDETPPP FPATTSNCHIDLILKQSPEDLKIWPHSFEFRLRVALSPTGDLMLTSRIKNTNADGKPF KFGFSYNTYFSVSDISEVRVEGLETLDYIDNLQCGKRCTEQGDAVVFESEAEKVYLSA PPKIVIIDHDKKRTFELRKEGLPDVVVWNPWDRKAKTILDFGEEEYKCMLCVGAANAE KPITLRPATARLASSSLDRLIEADELHF</aaseq>

Gene Sequence

<dnaseqindica>4583..4647#2430..2549#2159..2258#1970..2072#1561..1701#1278..1435#1127..1183#771..845#1..96#atggccggcggggtgtcgtccgtggaggtcgtgaaggacggcgccactgggctggagaagctcgtcctgcgcgaggcccatggctgctccgtccaggtcgaccccctctcctcaaccctagctttcagttgcagtatttctagcactggatcgatctgttcgtcgccaatcctccacaaaattattgtaattgagatgtaattagttagggggaattggtgggaattaatggagttgattctggtggtggagaaaatgtttgagtattactgtagtttagtttgttgcgatcatgcgagggaaggtagcaggtttggtcaaatgcccaattggtgtttgacctttggcttgtctgtggaggtggatgttcatatctacgcttaatttagtatcatttgatttcattctttaagatgtggataaattgtttattgggggtggacaccatgatgctattgttagctgtggttttgattggccttttgccattattttaagtattctcggcaacggtatgtctcatctgttttagacccaatcatttggacatgtttgttgtaaatattgctctaatgaataaggcaagttgcctttcgttcaaacaaaaatcacttggacatgtttgcacattgctcatgctttgtttttttatgacctttttgttgttgttgttgttgttgtttcagttatattagataaccttacaggttccttattatctttttttttcctcagaaatggtcaagtacgttatttttcactattttcaggtatttctgtacggaggccaagtgatcttttgggaaaatgaatatcgagaacaactgctctttgttagtagaaaggtattcagatcttttaatgttcagtaagggcattatttctgccttgcaggcctatatatcgaatgcatttttacatttatgcactctacagatttggcagcaaggcttccttttcttagataagtggttgttttaccattcttttttttggtcgtttttagtttttcaggaaaatgagatatgttatgagtgtcaaacgttttatcttccaattacatgaattgacacttaagccatttacaattacccaataattccacattttttaaatttcttggcaggcttatttcaaaccaccaaaggctattcgtgggggcatacaaatttgctttcctcaagtatgaccctgggactgttcattcatagtccagttatgtttttcaagaattttgtctcccctgtaatacccaaaatggacgatccatcatgcagtttgggaaccatggagttcttgaacaacatggatttgcaaggaaccgattatggagtgttgatgaaactccccctccttttccagctaccacttcaaactgtcatattgacttgatactcaagcagtccccagaagatttgaagatctggccgcataggtgtcctctagtaaatccttaacattatttgctatggcattggtagattagaatgttccatttttgaattgatatatcctttggctcctgctaaattgatgaagttgattatccatatatttcagttttgagtttaggctgcgagttgctcttagccctacaggagatctgatgctcacatctcgaataaaaaataccaatgcagatgggaagccattcaaatttggattttcatataacacatatttttcagtctctgacatcaggtacattttgtcgtggtaatttgcttgtattatgtttatatgtaaaattaggcatttcttacattctttgactgaggcatatagctcataggatatgcacttctatactaagtcgtgctgatttttgttgacaaaagttatgttcggacctcttttggattttatcactccaaatattattcaaatgtacagaatgaatgatgtactatatgggtacttggcttctacattgtatttttcctccataaaaattgttttcacattccagtgaagtacgggttgagggtttggagaccttggactacattgacaacctgcaatgtggaaaacgttgtactgaacaaggagatgccgttgtattcgaatctgaagtaagcttcataattcatttgcaagtttcatattttgcagccattgcagtaagattgtgtttcttgttaatgctttgattgctaaggcggagaaggtatatttgagtgctccacccaagattgtgatcattgaccatgacaagaagagaacttttgagttaaggaaagagggacttcctgatgttggtaagatgctaatttctggattacacagcacggttgttctggtccttttgttttgcttacttttatgtgtgtgtgtgtgtgtgtgtgtgtatttgccgggtcaacaaagaagccacccacaaggggccttctgtatatatatgtctcgtcagtatacttttttttatgcagttgtttggaacccatgggacaggaaagcaaaaacgatactggattttggggaggaagagtacaaatgcatgctatgtgtaggggctgcaaatgctgagaagccaattacattaaggcctggtgaagagtggcaaggaaggcaagagatatctgttgttccatccagttacagcagcggacaatgggatcctgaaataattcatcggatacaggacatctgaatttctcagggattgcattccgtcattttcgcgcaagtattatggacttcccttagatctttttttttatatgtgtaaaagaaataagtgcataagtaatactgtttgctacttacactgaaacatcaagttttgctgcaggaagactcaccaaacagtcacagttggtagtactcttcaataaatttatctgaatgtctgtctgctccattccaaaatcaaaagcatatgctgtggttttcctggaggagtcaaagtcaccatcgtgtttttatagaaaagatggagaatttcaggttcaatatagatatgtaatcctgtactggatggtttactgtattacaaaaagtccaatttgacactgtgggaaagaaatgtacagaatgatgattttcgttgttttacactactacctaagaggctaaatcaccagaagatcatttagctctcatcaagagctgctcttaattctgacgtgcaaattcaagttgttataaagtggagagacaggaaatcgagagcttgaaagcttgatttttttttcaagattttgaaatatgcagtctgctcaaactaatctctctcctttccattggtaatttacaagtcacaacctggtatttttggtagaaactcactgcagattcagaaggcatcaagaatgcctggcctgttgctcccatcgctatctgaataacctgtaagtgaacagtcttatctgtatatttcctagattaaaaaagaagtcaaattacttttagtcattgtccactaagttgagttcgacctcgaaatattttctgcatctctcactgggctcaatctagtgctggctgctgggccgtcgacacagctaagcctgatctttcctttggttaaatgggcttttgattttcaaaaacattgcaaatatgtactccctcagtccaaaaaaaaccccaacctaattaaggatgggatataatctattacgatgaatctaaataattactaggttgggttttttatttggacgaatggagtacaattgtgtaacccctctcatcattgatggtccatctctttaccttcgatgattcttcatttcatctcttttgccttttgttttaatctaaaaaaagatggccagcttgccctggcgcgttattaccttacctttgccaaagaggaataaagcgagctccgcgtgaatgatgcaaacgcagctttcatcttccccagcatagcccaaactggaatagtgtgcatctggataagatttaacccctctgtttcgaaatataagcagttctatcgtttaaaatttatactcaaatataagcatttcttgtgctacatattcttattactactactcatctcatcaaccaacttctgtttattttttctccatcttactcataaccatatgttgtttaattgtatgaaaatatttttcttgtgattttaacatctgctaaacatgttagaaatgcttgtaccataaccatctcttatttaatgagatgtatcaaaatattttctttctgattttaatctctgctaaataatctaaaaatgcttatatctcaaaaccgggggggggggggggggtctaaagtgctagcaggataatgcagcctgcaggacctgacgccgatctgctaataatgacaatgtgtgtgcaaacaccgggagcaggtgtaaatagcacttgcaaactcgtctaagtaaacactgtcatgataggataattatatattaaacatgtgtattatatgacataatcttgatctaccattgttacttttcactagatggcaactgttgtagttggtgatcagtaatgtcgtacgtcaggtgtggtcggatgtaatgcatcatggatgatcaaatcgaattaatgcgcgattatattagttaacgcaacctaactcccaatctaacctgcagctactgctaggctagctagtagttcgcttgatcgcttgatcgaggcagatgagctgcatttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0176900, RefSeq:Os02g0176900