Os02g0177500

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Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0177500| Description = Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)| Version = NM_001052603.1 GI:11544...")
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Gene Name

Os02g0177500

Description

Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)

Version

NM_001052603.1 GI:115444576 GeneID:4328484

Length

3580 bp

Definition

Oryza sativa Japonica Group Os02g0177500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4270617..4274196

Sequence Coding Region

4270808..4270871,4271548..4271612,4271717..4271754,4272060..4272147,4274134..4274139

Expression

GEO Profiles:Os02g0177500

Genome Context

<gbrowseImage1> name=NC_008395:4270617..4274196 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4270617..4274196 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgactgtgccagttaacccgaagcctttcttgaacaacctgacagggaagcctgtcattgtcaaacttaagtggggtatggaatacaaaggatatcttgtttctgtcgactcttatatgaatctgcagctggctaatacagaggagtatattgatgggcaattctctggaaacttgggtgagatactgataaggtgcaacaacgttttgtatctccgaggcgttccagaggataccgagatagaggatgcggaatga</cdnaseq>

Protein Sequence

<aaseq>MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQ LANTEEYIDGQFSGNLGEILIRCNNVLYLRGVPEDTEIEDAE</aaseq>

Gene Sequence

<dnaseqindica>3326..3389#2585..2649#2443..2480#2050..2137#58..63#ccctacgcatccccgaccagcaccggcaccggcggcggcggcggctaccccccttcaatggcggtattgccctcatctctctctctctctctttctccctcgatattactccgcgaaattgtttatctcgtgtagtggatctgtttacgcttcgaatgtttttttttgtcgcgtgatttggtgccaactgttgtggtagtctcgtagccgtagcttcgtgtgctcgattcggagtaggtggatatagattggagggcttaactgttctaggtctatgacctccaggatagataggtcggatgtgtgatttgggataggtttcatgtcgaattgtggtgagggaaaaattgaagtatttagaaaatcccccaaaagttcgttttggggttgtagagctgcttgtttcttcttcttcttcttcttcttcttcttcttctttttctttttgaaacccctagagctgcttgtttcgaagatgtggtttgagttatggttatcttttatggcgcaggagtgtaagtttggacccttgcttagctttcaggttgaaagaacgatggatgtagagctgtttgtttggttggaagatgtgctctgattttctttttttatgcggcacacgaacctccctagttatcctcaagtcatggtagatcagtccgaaaacgggacgggatgggccaacccgtcacctataccctctgccccaatttagatgggaaccacttggaaaccagggagaaaaattggcccgtccctcttgcagtggaactggctggccccattaggttctgcaggactgtgcactagttcaggctgcagcgcatgcaaagtgcacactaagcatcacacagaaattcagactgacaagttgataatagaaattgacagattgatagctgaataattcagaacagaaacagaaagcgtgccagattgaattaaaaccagaaaatagaaatttcaatccagaaatttaacaaagatacatactccctccatactcgtaaaggaagtcatttaagacagcgacacggtctccaaaacacaactttgacttcttgtttctataaaaatatttattgaaaagtgatatatgtatacttttacgaaagtatttttcaagacaaatctatacatataatttttatattttcaaactcaacaacttgagagttattcatgatttatattcccaaagtttgacttaaacattgtcctaaacgacttcctttatgagtacggagggagtacaactccattaattttctgagatgttcagatcagaaactgtgattcctttacgcatatcactagcacaactgccaaaaatcgaattgaacatcagaaaaatccatggattgtgataaaatgaaattcaatatttcagagtaaaagaagagtttgaatgggaagcacacacttgaatctgccatgctgctcaagatgcaagaacaagaagtgttcccattccttgctcactattctgactggtacatcagtatgggctgaagaggaaagggcatcttcagcttaatcttgtaaaaaatatttgaaacttgacaactcagctgttcacatcaaggttctctatgtggactatgctttacttgaattggagcttcagaagagcattgaggaactattgtatccctctttgagtggggaaaacaaagacaatgacccagtggtctaaatgtcatgcgttgcccctagccggtctgtcctggattggcttctgcctgtctcttgttaggcctgcgtaatcagttacggtatgtagctgctggtctgtcggctgagtagggagtagcacccagcgtcttgcgctaattagggcttcaacacatcagtttggtgttctattgctgcagataattgcaaaacaaacttgatttgttacagacattgtactgacctgactagtatttgttttcttctgattttcttcatgatgattattcatggtattcagttccaagtggtgcctccatatacatcttgtctatactcttttatatactattaatggattgtttctaaatgcagactgtgccagttaacccgaagcctttcttgaacaacctgacagggaagcctgtcattgtcaaacttaagtggggtatggaatacaaaggtaatctatacttttacccgtcacattttattcactgatatgcttaggctagtgattgaaatttcagaatgaaatctctgaggtttcaggaacattgaaatttgtccagtttttacatgaaatttcttgcttccatggacaattacttcatggcacttatcaagaacatccactttcattggttttacaatggaacttcaatggaaatcatgtgttaaaatgggtcctcttgttgtaatttagttttcagactgtgccttattatcgattatgctgacgatactctttttgtacccccctttcaggatatcttgtttctgtcgactcttatatgaatctgcaggtattattttgtattttgtatcagttaaattcgttcatttaccaatatggatcgacgtgtcatcttcttttgctgcaatttacctaattgtctactgctttcagctggctaatacagaggagtatattgatgggcaattctctggaaacttgggtgagatactgataaggtaactctatatatcgcccttcagtcctggaccagattcatctgtagttattggcttaccgctggtacttatgtactcataggtgatctgttggttacttgcatgctattaccctgttttcagtctgactggtaatattaagagatagaatgatagtatggtaaaatgtggagagatagaatgatagagttcagagtatatggaatttactcaaatgcagaagtataacaagtagcagcgcttataacttgggaagtcttttgctgactaaatcgttaaagagcaaccgcaatgtatactaccaaagtggataataacgtgggcctggggttcaggtggtaacagttattacaaagctcacaatgtgctatgcctattctgcaaattaaggtggggtccaccttaaaaagaatcattgtaaaactatctcctatagccatgctcgtacaaaaagattcccatatctacagaaaatattgttctttattctcttgttaccggcagtagcacaatggcccggtagtagttattgtctctacccacaatgcttcttacctggttataagcctatattaattgcttgttacctgcttttgttcaacattgtggttgcccacaaaacatattcaattgtctgatgtataattcttatttgtttcatttgtgaactgtacaggtgcaacaacgttttgtatctccgaggcgttccagaggataccgagatagaggatgcggaatgagatagcccgggccatgtccagattgattattgtaatatgctgctgacatgaacaattaagtgtcatgtacaactgatgcagattgacctggatctttaactatgccatgatatggtaatgttatgcgttgaaactgtcgttgctcggaatgtgtgagatcatatttcgtaagaaaataccatttgcctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0177500, RefSeq:Os02g0177500