Os02g0177800

From RiceWiki
Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0177800| Description = Similar to Calmodulin-binding protein 60-B (Fragment)| Version = NM_001052606.1 GI:115444582 GeneID:4328487| Length ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0177800

Description

Similar to Calmodulin-binding protein 60-B (Fragment)

Version

NM_001052606.1 GI:115444582 GeneID:4328487

Length

5809 bp

Definition

Oryza sativa Japonica Group Os02g0177800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4293245..4299053

Sequence Coding Region

4293528..4294117,4294561..4294762,4296145..4296348,4296425..4296585,4296665..4297158
,4297526..4297584,4297766..4297841,4298757..4298845

Expression

GEO Profiles:Os02g0177800

Genome Context

<gbrowseImage1> name=NC_008395:4293245..4299053 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4293245..4299053 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggagaagcgcgggctggaagccgcggcggccggtggcgacggccaccccgaggccaagcgcgcgcggcctcccgcactggccagtgttattgttgaagcattaaaggtggatagtctgcagaggctttgctcatcactggaaccaattcttcgtagagtggttagtgaagaagtggagcgtgcgttgggcagactgggtcctgcaacaataactggaaggtcttccccgaagcgaattgaaggtcctgatggaagaaatctgcaactccagttcaggacaagactgtctcttcctctttttactggaggaaaagttgaaggggagcagggagccgcaattcatgttgttttgcttgatgctggaactggttgtgttgtatcttctggacccgagtcatgtgccaaacttgacattgttgttctagaaggtgatttcaacaatgaagatgaggagggatggtcgggagaagagtttgaaagtcatgtagtgaaagagcgtgaaggaaagcgccctcttttaactggtgatgtacaagtcacactaaaagaaggtgttggcactgtaggggagcttacattcacagataactctagctggataaggagtcggaagttccgacttggtttgaaaatttcctcaggattttgtgagggtattcgcatccgcgaggcaaaaactgaagctttcatggttaaggaccacagaggagaattgtataagaagcactacccacctgcgttgaaagatgaggtctggaggttagaaaagatagggaaggatggatctttccataagagactgaacaaagctggaatttctacagttgaagacttccttaggcttgtggttcgagatcctcagaagttgcgcagtatccttggaagtggtatgtctaataagatgtgggatattcttgtcgaacatgcaaagacttgtgtcttaagtggaaaatattacatatattattcagacgagaatagatctattggtgctattttcaacaacatctatgcattctgtgggttgatttctggcgagcagttctattcatctgaaagtcttgatgatagccaaaagctctttgctgatgcattggttaagaaggcatatgataattggatgtatgccattgaatatgatggtaaagctctcttgaactctaaaccgaagaaaaaggctgcacccactggacacgttgagacacatcctcctctgagtcaacctgcttcatacgaacaacgcatctcatcagcgagcatgacaggaccatctccagcaggaggaagtggaactggaactgattccatagggtatgatggcaaccaagcagctacacagccatctcaacttcaaagtacatctgccaatgtccctgtgccatacgatgacaccttttcatttttaccgcctagtatgttgatggggtctgataatcaagaaaccggaaatgatggcatgggcctggaactaggccaattgcaacaagcaatttcacagagtcagtcgattcagccagcaaatgttggctatgatgattggactcgaagtcaaaacggtcagttcgctgatgacttcaccgaagatattcgcatgaaaagccaccaaatgctcgagagcgaagacatgcagcagctgctcagggtcttcagcatgggtggagcgtctaccagtttgcaggaagacgccttcggcttcccgacgtacatgccatctccattaccaaaccttgggttcgaaggtgagcgcacccgttcatctgggaaagctgttgttgggtggctcaagataaaggccgccatgagatgggggattttcgtcaggaagaaagctgccgaaagaagggcgcagcttgttgagctggatgattaa</cdnaseq>

Protein Sequence

<aaseq>MKEKRGLEAAAAGGDGHPEAKRARPPALASVIVEALKVDSLQRL CSSLEPILRRVVSEEVERALGRLGPATITGRSSPKRIEGPDGRNLQLQFRTRLSLPLF TGGKVEGEQGAAIHVVLLDAGTGCVVSSGPESCAKLDIVVLEGDFNNEDEEGWSGEEF ESHVVKEREGKRPLLTGDVQVTLKEGVGTVGELTFTDNSSWIRSRKFRLGLKISSGFC EGIRIREAKTEAFMVKDHRGELYKKHYPPALKDEVWRLEKIGKDGSFHKRLNKAGIST VEDFLRLVVRDPQKLRSILGSGMSNKMWDILVEHAKTCVLSGKYYIYYSDENRSIGAI FNNIYAFCGLISGEQFYSSESLDDSQKLFADALVKKAYDNWMYAIEYDGKALLNSKPK KKAAPTGHVETHPPLSQPASYEQRISSASMTGPSPAGGSGTGTDSIGYDGNQAATQPS QLQSTSANVPVPYDDTFSFLPPSMLMGSDNQETGNDGMGLELGQLQQAISQSQSIQPA NVGYDDWTRSQNGQFADDFTEDIRMKSHQMLESEDMQQLLRVFSMGGASTSLQEDAFG FPTYMPSPLPNLGFEGERTRSSGKAVVGWLKIKAAMRWGIFVRKKAAERRAQLVELDD </aaseq>

Gene Sequence

<dnaseqindica>4937..5526#4292..4493#2706..2909#2469..2629#1896..2389#1470..1528#1213..1288#209..297#cttgcaaagaatcctgcctcccccgccgacgcctcctcccctcccccgcgatccctccgccgccgccgccgccgaatccggcgtccccagcctaggcgaggtgaccggatccctcttcgctttccttcacgcatgtcaaattgcggaaaagggtggcggaatctgacgcgggttgtgctcgtttcggttgcagatttgggggcgcgcgatgaaggagaagcgcgggctggaagccgcggcggccggtggcgacggccaccccgaggccaagcgcgcgcggcctcccgcactggccaggtgaggggaaaattttccgcggttttgatctttctttccgtttctagcctcgagatatgtttgggatgctagccatagtagggttagggttactcctgcagtagtgctcgatcgagaattgggagtggtttgatttagtttactgcttagttgcggtgtgtaatttgagcatatgtagacatgatgctgcaaaatttcttttagaaaggtggtgtgtgatctgtcagggaaatgccagaaatcttagtaagtttgtactctgacccatcagtagaatttttatccttctgtgacaaattttggtcttaggtcggcactcggcactgttagtgttactaatagtgatactgttgaccaacccctatctgtatgttataggatggatccaaatgactgtttcaggatttggggttgtactaccttttagagatagcttttcccaactgttcttttctgtgctaatgtgcttgtgcagaagtcagcaggtgtgaaacacatttccactatctaacaaaataatcctcatctatggtctctgcaataatagtgttagtatttttgtaacaaccagcatctgtgacttatttgcatttgtttttaatcatggatctgttcgcaaatgctagtacagtagatggctatgaagtgtactgatcttttgatgctgatttatggtctgtcagttgtcaaatttgactaccatggttttaatgaatgtctttataggttttttcttttatttctgcacatcatttaataatggtcaattacttatttctggtagttttgattacagtttttttcaaacatgtttcccttgcgtgttcattactgtaaagctcaacatgtgagaaggtgaattgcgtcttttgttcttctgtcatgattttttccgcttcgcctctttctctgcagtgttattgttgaagcattaaaggtggatagtctgcagaggctttgctcatcactggaaccaattcttcgtagagtggtaagaacaaagcaattctcttttaagcggaattctattatcatgtcgctttactctctttttttttgcataggtttattctagcatgctactgtctacatttatatgttccttcactactgttaattatttcttgcacttagttacattcggttatatatattctctgtatacatactaggttagtgaagaagtggagcgtgcgttgggcagactgggtcctgcaacaataactggaaggtactctgttctatcgcttagttgactatgaatttattgtttcacacacttccttgtataatataatccagcagtacatcgaactaaccgttgaagttatattgctgcaactcctaccatcaaattgcatatgatacaaaataaccttttgttagctgtgcttgttcatgatgcttgttgctagttcttttcacaagtaacctattgcttgttttaggatatctgggctagattataactgttaaaatgaagcacgtaaacctacaacaacctttggtagaacccacattgatatatatatatatatatatatatatatatatatatatatatatatatatattttgctactgttggaataattcaggtcttccccgaagcgaattgaaggtcctgatggaagaaatctgcaactccagttcaggacaagactgtctcttcctctttttactggaggaaaagttgaaggggagcagggagccgcaattcatgttgttttgcttgatgctggaactggttgtgttgtatcttctggacccgagtcatgtgccaaacttgacattgttgttctagaaggtgatttcaacaatgaagatgaggagggatggtcgggagaagagtttgaaagtcatgtagtgaaagagcgtgaaggaaagcgccctcttttaactggtgatgtacaagtcacactaaaagaaggtgttggcactgtaggggagcttacattcacagataactctagctggataaggagtcggaagttccgacttggtttgaaaatttcctcaggattttgtgagggtattcgcatccgcgaggcaaaaactgaagctttcatggttaaggaccacagaggagaatgtaagtcctctgaagcaaccatgatatgatacgattcttcatgatatttctattaactgtttgaatttcatttgattagtgtataagaagcactacccacctgcgttgaaagatgaggtctggaggttagaaaagatagggaaggatggatctttccataagagactgaacaaagctggaatttctacagttgaagacttccttaggcttgtggttcgagatcctcagaagttgcgcagtgtaagattatttcctattcagcatttttcttctttttttcttttgtttgagttctaacatatatgttctgtcccagatccttggaagtggtatgtctaataagatgtgggatattcttgtcgaacatgcaaagacttgtgtcttaagtggaaaatattacatatattattcagacgagaatagatctattggtgctattttcaacaacatctatgcattctgtgggttgatttctggcgagcagttctattcatctgaaagtcttgatgatagccaaaaggttggttatagtagtgcacattgataacgatgcatatattatgttggctgtttttggaagacataattcataccaaaattttcttatggaaacttgtctaacatgcctgtctacatggctatatccaagaatgaaaccacggcaaccaaaactacatgtgccaccaataaaatgacaatcgtacccttacgtggtcatgacatatgtgattttgctcttcgttctccattcacatgcataattataagatgatacattagttagagttaatctgtttgactctgtaaggcttctagactgataaagattaaagcatttaaccatgctaatgaatgcatgtggacagcaaactgaatgagccatggtcacagaaacaagtcaggaaaccataaaacttttgaaattttcatttgcaatgccatgggatttcgttgggatttctgctaaaccacgcattgttgtaatcctttttgttgtgtgtgtatgtcgtggtccttaagttgtcttctaatgtcaaacttgaatggtatttccattcatttaaagatgcactcatgtaacacaaaagcaataaaaaatgcttggttgcatagctttccttttgtcacattttattctggacagcgaacccttttaggcatggccaccaacatagtggcagtgttgttttgctacgtggcgtggttaaaggtttcatttattaataaaaagtgagaactgttggcgtatcaatgttcatttgctacacctgactggttgcatactagcatggccggacagcctaaagggttatttttgtaaataagttagggaggggtgataataatgtgtactttgaactttatattatgttagtgcgttgatgtaggtcacgcacacaccccttctcttatattgtagcgcatgctatgaactggaataaggtgtatcaagtgttttgtgctacgatgacccaagaatacttgggttagttgcattggtgcctcatcatgtgtcagctgttcttttgttcctaaggtcttctgacctcctgtctgccaatcgattgttgcagtaaacttcctttggcacttagtgaatagagagtgcccctgtagtcctgccatttttattttttaaaggatgtgtcactgtacaactccccaaacatcagtacagaagacattgataaatcattaagaataaccactatttaatgaaataaaactcagccttatattcactgtattcttctgtgtaaaatctaagcttgtagcactacacttgcatgtttaagaattaagagctatgctttatttattctctgcatgagcttttgagaactttaagctattcgtttttaataccatattgactgattgggatggtattgttcattacagctctttgctgatgcattggttaagaaggcatatgataattggatgtatgccattgaatatgatggtaaagctctcttgaactctaaaccgaagaaaaaggctgcacccactggacacgttgagacacatcctcctctgagtcaacctgcttcatacgaacaacgcatctcatcagcgagcatgacaggaccatctccagcaggttagaagcatgagttattatctaccatttctatgttagtacctctttgttattttagttgacagctagaaatatactctctccgtccccaaatataagacatcgaataattcaaattttgtccccgaatataagggattttgtagtactacctgtcccatccaatcacccctcatttaattttcacccaatcctaccttaaccaccctcccgctccccaactccccctcatttattgaggggcatcatcgtctttttctctcatccttaatctccaaaagactctagaatcccttatatttggggatggggtggtagtaattaatatggttgaaaccctaaaacgttgcttacacttttagaataaacagatgaactatagggcgcgtgatttgtcactatagaagagtctctgaacaccatgctagtttcattcatttcaggaggaagtggaactggaactgattccatagggtatgatggcaaccaagcagctacacagccatctcaacttcaaagtacatctgccaatgtccctgtgccatacgatgacaccttttcatttttaccgcctagtatgttgatggggtctgataatcaagaaaccggaaatgatggcatgggcctggaactaggccaattgcaacaagcaatttcacagagtcagtcgattcagccagcaaatgttggctatgatgattggactcgaagtcaaaacggtcagttcgctgatgacttcaccgaagatattcgcatgaaaagccaccaaatgctcgagagcgaagacatgcagcagctgctcagggtcttcagcatgggtggagcgtctaccagtttgcaggaagacgccttcggcttcccgacgtacatgccatctccattaccaaaccttgggttcgaaggtgagcgcacccgttcatctgggaaagctgttgttgggtggctcaagataaaggccgccatgagatgggggattttcgtcaggaagaaagctgccgaaagaagggcgcagcttgttgagctggatgattaacaacatgttaagcgtgtattggctaccgttagatgctattaatgttgaaatgttaataccatcagatgctctaaactaggttttgggactcatgctgccttgaaaggcattgaaacaaaccaaccgattatgtacagcgggtagttctgctttgttgtaaaaacatctgaaatgtttgcgtaccattttattttcctcgtttgttatagattgtgcagattataaacaaaacaatgtgaattaacgcggatagtatgtgtatggccgatgtgttacctgtagg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0177800, RefSeq:Os02g0177800