Os02g0178000

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Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0178000| Description = Similar to SNF1 related protein kinase-like protein| Version = NM_001052608.1 GI:115444586 GeneID:4328489| Length = ...")
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Gene Name

Os02g0178000

Description

Similar to SNF1 related protein kinase-like protein

Version

NM_001052608.1 GI:115444586 GeneID:4328489

Length

3045 bp

Definition

Oryza sativa Japonica Group Os02g0178000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4306892..4309936

Sequence Coding Region

4307204..4307278,4307387..4307461,4307559..4307621,4307715..4307819,4307917..4308024
,4308123..4308260,4308357..4308446,4308533..4308658,4308728..4308781
,4308865..4308936,4309060..4309167,4309272..4309343,4309456..4309518
,4309747..4309908

Expression

GEO Profiles:Os02g0178000

Genome Context

<gbrowseImage1> name=NC_008395:4306892..4309936 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4306892..4309936 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtttgtggagagcattgggaggtacagggttggccggaccatcggcgccggcacgttcgccaaggtcaggctcgccgtcgacgccgacaccggcgccaccgtcgccgtcaaggtcatcgacaagaggatggtgatccgcaacaacctcatgtaccaggtcaaaagagagatcacggccatgaagctcctcaaccaccccaacattgtcaagatatatgaggtgatcgcgacgaagacgaagatatgcctggtaatggagtatgtctcaggagggcagctatctgacaagctaagttacctcaagaggttggatgagaaggaagcgaagaagtatttctaccaattgattgatgctgtagactactgccataggagaggtgtctaccacagagatctcaagcctgagaacttgttggtagataatcaaggcaatctcaaggtatctgattttggcctcagcgtgctaaaaaagccaggacagtttctatccacatcttgtggctcaccatgctatgtagctcctgaggtgattcagcacaagagttatgatggggcagctgcagacgtctggtcttgtggtgtgatcctgtttgaacttcttgctggttatctaccatttcaagactgcagcttaacaaacttgtacagaaggatatctcgagctcagtttgtttttccacaatggctcagtgtccctcagaagaagattataatcaggatactggatccatctcctataacaagagcaaagataagcgatatttttgatgataagtggctccaagatcactgcaatccatcagcaaggattgagaatgatgatgattgtgatgttattgaagaggccagcacagacagtgatagcagtcacaacacagaggtaaaggaaactgaagagatgacggcagaaactgaccgattcattaatgccttccaattgatagcgagatgcagtgatcttgacttgtcaggtctcttccaggagcagaaaacaaagctcgcctcgccacacccagtacaggaaaccttcgacaagatcaaggttgcagccaaggatgtgagcatggcagtgaagagaatgaacagctctctggtggagattcaggacagcaaattactaccaagaagcaatcttgatcttactctgtcggccgaggtgatcaaggtaacaccagctcactgcgtcgtcgaggtgtccaaatcaactggggatctgagatcatacaaagagttctgtagaagcctatcaagcttgctcaatggtggacagctgtctgcaagctcatctgatatggagtgtgattaa</cdnaseq>

Protein Sequence

<aaseq>MGFVESIGRYRVGRTIGAGTFAKVRLAVDADTGATVAVKVIDKR MVIRNNLMYQVKREITAMKLLNHPNIVKIYEVIATKTKICLVMEYVSGGQLSDKLSYL KRLDEKEAKKYFYQLIDAVDYCHRRGVYHRDLKPENLLVDNQGNLKVSDFGLSVLKKP GQFLSTSCGSPCYVAPEVIQHKSYDGAAADVWSCGVILFELLAGYLPFQDCSLTNLYR RISRAQFVFPQWLSVPQKKIIIRILDPSPITRAKISDIFDDKWLQDHCNPSARIENDD DCDVIEEASTDSDSSHNTEVKETEEMTAETDRFINAFQLIARCSDLDLSGLFQEQKTK LASPHPVQETFDKIKVAAKDVSMAVKRMNSSLVEIQDSKLLPRSNLDLTLSAEVIKVT PAHCVVEVSKSTGDLRSYKEFCRSLSSLLNGGQLSASSSDMECD</aaseq>

Gene Sequence

<dnaseqindica>2659..2733#2476..2550#2316..2378#2118..2222#1913..2020#1677..1814#1491..1580#1279..1404#1156..1209#1001..1072#770..877#594..665#419..481#29..190#aagttgggagagagagggagacggcgagatggggtttgtggagagcattgggaggtacagggttggccggaccatcggcgccggcacgttcgccaaggtcaggctcgccgtcgacgccgacaccggcgccaccgtcgccgtcaaggtcatcgacaagaggatggtgatccgcaacaacctcatgtaccaggtgatgatcatgatcatgatgaacaattcatctgtgtaatttatcatttgttgtttcgtggttagtccattgatcgatcgatccaggcacgaatagatagataggttcttcttttttaggtaatggaaatgatgatttacatcccttgcttctaccataaaatatacaaccataagtttgttcttgatcgatcgttaattagtttgcatgatctggattttggtgaaggtcaaaagagagatcacggccatgaagctcctcaaccaccccaacattgtcaagatatatgaggtgattaagcttggttactaattacccgtatcagcatcagggtttcagccgtatcagcatcagggtttcaggaggaatggaggattatattataccttttcttcctgtgcaggtgatcgcgacgaagacgaagatatgcctggtaatggagtatgtctcaggagggcagctatctgacaagctagtaagacatcatgcataatcaattaaccagcatgtaattctagtctgattaactcagctaatttttcttgcaattcctgatctttcttttcttctgggtttaagagttacctcaagaggttggatgagaaggaagcgaagaagtatttctaccaattgattgatgctgtagactactgccataggagaggtgtctaccacagagatctcaaggtcaagaaatcaagatattgctgctctcatttcattaattgctatccctgttttaatcatctcgatcccttcatcataagctataatttgctgatttatagcactttctgatgatgtaaacagcctgagaacttgttggtagataatcaaggcaatctcaaggtatctgattttggcctcagcgtgctaaaaaaggtaaaagctagcaaacattatcagcatcaccgaatgattcatattcaactctgaaaatctgtgtttaaatttctttgatccagccaggacagtttctatccacatcttgtggctcaccatgctatgtagctcctgaggtaggacaagtttcttgcagaagttttagtcatttgcattgccaacttatgattcagattgtttgacaggtgattcagcacaagagttatgatggggcagctgcagacgtctggtcttgtggtgtgatcctgtttgaacttcttgctggttatctaccatttcaagactgcagcttaacaaacttgtacagaagggtaaacatccgaatacgataccgccttttactctactgtctgttactgatttcagatgtcctaactgaaaatatttctcttgaaagatatctcgagctcagtttgtttttccacaatggctcagtgtccctcagaagaagattataatcaggatactggatccatctcctataacagtaagctatgataaatacttatgtagcactatgtaagcattggatggttgccgacctttattttgctgataacaccataccttaaatgttctttagagagcaaagataagcgatatttttgatgataagtggctccaagatcactgcaatccatcagcaaggattgagaatgatgatgattgtgatgttattgaagaggccagcacagacagtgatagcagtcacaacacagaggtaatttgatacagtttggaacttactccattctagtagttcttacctctcaaccagtctttcctgttggtagttgctaagattgcccttgtatctaggtaaaggaaactgaagagatgacggcagaaactgaccgattcattaatgccttccaattgatagcgagatgcagtgatcttgacttgtcaggtctcttccaggagcaggtgcactaagctttagaatagattactttcacaaattacctacaccaatacacggcagtaaactaagatccttgattgattgaccgatgttttgcagaaaacaaagctcgcctcgccacacccagtacaggaaaccttcgacaagatcaaggttgcagccaaggatgtgagcatggcagtgaagagaatgaacagctctctggtaattcatctcaccaacatatggtttcagtttctccaatgaaattatcaaattccaggtgaaatttttagtccaattctcattatgtcacaggtggagattcaggacagcaaattactaccaagaagcaatcttgatcttactctgtcggccgaggtgagatatcctttctgaaatcacttccatcatgtgtagtgtgtcctttttctgttgctcagggattgaagcttacctgaaaagtgagaaattgcaggtgatcaaggtaacaccagctcactgcgtcgtcgaggtgtccaaatcaactggggatctgagatcatacaaagaggtttgttagtgttatgtttttgtttcagatcaatttggctccacctcaagatagtacgatgcacaatttactgaacggaaatgcaatgcatatgatgtcaacttgcagttctgtagaagcctatcaagcttgctcaatggtggacagctgtctgcaagctcatctgatatggagtgtgattaatcaagttatgttctatgagtagatgaatcaatgaatcttcaattatcacaaactcatggagttcaggagcaaacaagagtgcctaccgggcaactggtgagtggtgacctgaaaaaaaggtgatgataaacaggactaaagtcattcatcgcccttctgccgtaaatgctggtgctgacgtgttgtaacttgtaccttcaactgtatgataaacaaaacatgttgcatgcaaagggaacatgcaagccatttccatgtattggattttttcccccctgaacttataattttcattattgtgcttttctaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0178000, RefSeq:Os02g0178000