Os02g0178700

From RiceWiki
Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0178700| Description = Helix-loop-helix DNA-binding domain containing protein| Version = NM_001052614.1 GI:115444598 GeneID:4328495| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0178700

Description

Helix-loop-helix DNA-binding domain containing protein

Version

NM_001052614.1 GI:115444598 GeneID:4328495

Length

1102 bp

Definition

Oryza sativa Japonica Group Os02g0178700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4350869..4351970

Sequence Coding Region

4350947..4351514,4351639..4351703

Expression

GEO Profiles:Os02g0178700

Genome Context

<gbrowseImage1> name=NC_008395:4350869..4351970 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4350869..4351970 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaggccctagcaccaccaccatggccaccttcaagcaaagcttcctcaagaacctcctctcgagcctcaaaagctccagcaaaaacaaggccgccatgtcgaccctgagtgagaggaagcgtgccatcaagtcctccgccgacatcgccatggccaccgcccgcaccggcatcgccggagcagcacggtggccacatgccatcttggcatcatcatcatcgtcttcttcatcttcatcttcatcttcatcgtcatcgtcgatgccgagaactacatttccatgcaagatgatgcaagggaaggtgaggaggaggtgcaagagcatcgtgaggaggaggacgccattgatgagtagtagtagtgaggttgcgaggagactggtgaagaagagggacaaggtgctgaggaggatgatacccggaggcgagctcatcgccgacgagatctcgctgctgcacgaggccatggattacgtcgttcatctgcacgcccaggtcgacgtgctccgccgcgtctcgagagccgccgtggcgcggagatccagtgcgtcttcttcttcttcaggtgggcttgcacaattgaaggaacggacggttcagatctctggtgaaacggagaacccatgctag</cdnaseq>

Protein Sequence

<aaseq>MRGPSTTTMATFKQSFLKNLLSSLKSSSKNKAAMSTLSERKRAI KSSADIAMATARTGIAGAARWPHAILASSSSSSSSSSSSSSSSSMPRTTFPCKMMQGK VRRRCKSIVRRRTPLMSSSSEVARRLVKKRDKVLRRMIPGGELIADEISLLHEAMDYV VHLHAQVDVLRRVSRAAVARRSSASSSSSGGLAQLKERTVQISGETENPC</aaseq>

Gene Sequence

<dnaseqindica>79..646#771..835#acctctgccaacctagcttagctagagcctagaggagtcatctccatttcttagcttctctcctcaccagaagccaccatgagaggccctagcaccaccaccatggccaccttcaagcaaagcttcctcaagaacctcctctcgagcctcaaaagctccagcaaaaacaaggccgccatgtcgaccctgagtgagaggaagcgtgccatcaagtcctccgccgacatcgccatggccaccgcccgcaccggcatcgccggagcagcacggtggccacatgccatcttggcatcatcatcatcgtcttcttcatcttcatcttcatcttcatcgtcatcgtcgatgccgagaactacatttccatgcaagatgatgcaagggaaggtgaggaggaggtgcaagagcatcgtgaggaggaggacgccattgatgagtagtagtagtgaggttgcgaggagactggtgaagaagagggacaaggtgctgaggaggatgatacccggaggcgagctcatcgccgacgagatctcgctgctgcacgaggccatggattacgtcgttcatctgcacgcccaggtcgacgtgctccgccgcgtctcgagagccgccgtggcgcggagatccagtgcgtcttcttcttcttcaggtttgtttgattgctgaatttttttgcagctagatcttcttgatgttcttgaaattgttttgactctttttgttggtattttgtattgggttgtttttgtgacttgtccttgttcatcatgcaggtgggcttgcacaattgaaggaacggacggttcagatctctggtgaaacggagaacccatgctagatagtaggatgtgattctgaaaagaggagcaagatgtgttgcagatattggagaaatatccaagagggtgatcagatttatgtccctgatcacacttgataagcaagtgcagaagtgcccggagaaatagaagtggaagagtggtggagagtaatcaagattcgtactgttcaaagatgaatgagaggaaatttgtaagttggtggtactaattgtagtagccacttttgtaccagaagtaaaagtgaaattgattaattataatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0178700, RefSeq:Os02g0178700