Os02g0179800

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Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0179800| Description = Conserved hypothetical protein| Version = NM_001052621.2 GI:297598692 GeneID:4328503| Length = 5694 bp| Definition ...")
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Gene Name

Os02g0179800

Description

Conserved hypothetical protein

Version

NM_001052621.2 GI:297598692 GeneID:4328503

Length

5694 bp

Definition

Oryza sativa Japonica Group Os02g0179800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4432889..4438582

Sequence Coding Region

4433105..4433500,4433671..4433860,4434569..4434786,4434873..4436357

Expression

GEO Profiles:Os02g0179800

Genome Context

<gbrowseImage1> name=NC_008395:4432889..4438582 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4432889..4438582 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaataccttggtacatgttagcatgcaaagggtcaaatctgctcagattgttatcaaggaaatgatgaacgaactccatgcattccaagaggtgatgggtcatcaagataaaattttcgatagcctaaaacttgccagtggcatgggtcatgcgtacagggcttgtcttgctgaggtcgtacgaagaaagtcttcttttaagctttatactggcttggcagggcagcttgctgaaaagctagccactgagcgtgaagctgaggtaagaaggcgagaggccttctttaggacatggagtaagtacattccagaagatatcatgggttccatgggactttttgattccccaagccagtgcgatgtaacagttgctccatttgattgcaatcttctctcaattgatgttgatgatgtggaaaaacttgcaccccaatctttggtcgggtcttttctgaaatctgagagatcacaactgccaaagtcctccttgagcaattctggtaccagtggaaatttgagtaaatccgagcaatatccgccgaatgctgatgataagatggatttccaagactttctggggggttttgacagtgtggatattgctggaactagtaaattggaagttgaaaatgccagattaaaagcagaacttgcttctgcaattgcagttctctgcagttttggcgccgaatatggatatgaatctattgatgaagggcaaattgataatgtactgaaagatgcaagggaaaaaacagctgcagcactttctgcaaaggatgagtatgctaatcacctgcaggcaatgcttacagcaaagcagaatcaaaatttgtcctatgagaagcgcatccaggagcttgaggagcaattagcaaaccagtacatacaagggcacgtgatttctggaagcaaagatgcatctgattccctcctttctgcatttaaagctaatgactgcaacttgcacatatctggagggaggcaaacccaagtacgcgatgaatcaagtgtggccatggatgaggcctcttcaacatctgagcagccatctaaacaaacagaaggtggggatgagaatatgaccgacatttcaggtgcactgaacttgcaattgctcgatccaatagcacgcactaatttggatgctttcatggcagaattgccacctgatagtgaacataaaattgttgattctgataaggaagggcaagtattgacacagtttactacgactgatacttctggggttcctatagaagatcctcttggcatcttaaactccagaactaacgagcatcatacctcagagctgagaaacaaagagctgcttgtgtcagagttgcaaagtactctggaagacaaatcaaaaaggttagatgaaactgaaagcaagcttaatgccttggtggatgaggtcaactctctgaagaaagaacttgaacacacccagggtctgcttgatgagtctcaggtaagtcaaatgaactgtgtgcaactggagaactgcttacacgaggcaagagaagaggcccgcacaaacaaatgttcagctgacagaagggctgttgagtatgatgccctgcgttcatctgctctgaggatacatggtctgtttgagagactaaataactgtgtcactgcaccaggcatgtctggttttgcggactcactgcgtgctttagctctctcattagcaagtgcaaagaaggatgaaggtgatacaaccattcagtttcagcaatgcatcaagatcctggcagacaaagttggttttctatcacgacagagtgctgagctgctagaacgctactcaaggattgtaagagtgttggaggagaagaaagagtcgattaaaaatttgtacagtaagcttcaactggaaaaacagacagtatcctcggttgtcaatactgttcaacaggctagtaaggagaagatatcattcggccgtttcgaagttcatgagctcgcggtctttgttcggaaccctgctgggcattacgaagcaatcaaccggaactgctcaaactactacctatcagaggaatcagtggccctattcacggagcagcatccacggcacccagcttacataatcgggcagattgtgcacatcgaacggcgcatagcaaagctgccctcgcacggtgaccagatggaagcttcacgccttgatagcggtggccgccggtcgcccgcttccatgctgaacccgtacaatctgcctgtgggatgtgagtacttcctggtgacggtcgcgatgatacctgacaatattcgttga</cdnaseq>

Protein Sequence

<aaseq>MNTLVHVSMQRVKSAQIVIKEMMNELHAFQEVMGHQDKIFDSLK LASGMGHAYRACLAEVVRRKSSFKLYTGLAGQLAEKLATEREAEVRRREAFFRTWSKY IPEDIMGSMGLFDSPSQCDVTVAPFDCNLLSIDVDDVEKLAPQSLVGSFLKSERSQLP KSSLSNSGTSGNLSKSEQYPPNADDKMDFQDFLGGFDSVDIAGTSKLEVENARLKAEL ASAIAVLCSFGAEYGYESIDEGQIDNVLKDAREKTAAALSAKDEYANHLQAMLTAKQN QNLSYEKRIQELEEQLANQYIQGHVISGSKDASDSLLSAFKANDCNLHISGGRQTQVR DESSVAMDEASSTSEQPSKQTEGGDENMTDISGALNLQLLDPIARTNLDAFMAELPPD SEHKIVDSDKEGQVLTQFTTTDTSGVPIEDPLGILNSRTNEHHTSELRNKELLVSELQ STLEDKSKRLDETESKLNALVDEVNSLKKELEHTQGLLDESQVSQMNCVQLENCLHEA REEARTNKCSADRRAVEYDALRSSALRIHGLFERLNNCVTAPGMSGFADSLRALALSL ASAKKDEGDTTIQFQQCIKILADKVGFLSRQSAELLERYSRIVRVLEEKKESIKNLYS KLQLEKQTVSSVVNTVQQASKEKISFGRFEVHELAVFVRNPAGHYEAINRNCSNYYLS EESVALFTEQHPRHPAYIIGQIVHIERRIAKLPSHGDQMEASRLDSGGRRSPASMLNP YNLPVGCEYFLVTVAMIPDNIR</aaseq>

Gene Sequence

<dnaseqindica>5083..5478#4723..4912#3797..4014#2226..3710#ctcctcttcctcatcctcctctctctctcacccctcggtctcgctggttcttgctaacgccacgcacgctcgctgctgaatccgtcttcccggcgaagaaggaggaggaggagggatcccggcgaggcggttgttcgcgcgtgacccgctcggtgaggtgaccctctcggcggaggagtcggattgcgtcttggagaccggttccgtcttgtggatggtcttggtgatcgagaagaaatccgtggcgggttggtgaaccggagacggggaggaattgggggaagggaaggggggaggaggaggaggagctgtgtgttcttgggtgggcgcgccgcgcgttcttgcgagattgggtggttggttttgattgtggtggtatggtagaaaaactgcagatttaatctgaactgcgttggggggagtggaagaggaggaagaaagatcgggtttcgaggcgggggggggggagatgagttccgggtcggcggtgacgggcggcggcggcggcggggcggaggacgcggcggcggtggcgctggggcagaagctgccggtgcacgtggcggagaacggccacaccttcgagttcaagtgcggcggcgagacccccgtggaggcaatccagcgcaccatcgagggcctctgcggcatcccgccggccgaccagctcctcctctgcgggaacacctcgctcgacggcgcccaccatctcgcctactaccagctgccccgcgacgaccgggaggtgttcctgtacaacaaggcccggctccacgacggcgcgccgcgccccgcgccggagtcgatcgaaatcccccagccgtcgatcccgccgccgccccggccacaggattccccgccgctggatgtgtcctccgacccggcgctgaaggccctggtgtcctacgagaccacgttcagataccacttccaggtggggaatgccgtgtatcagtctagcgtggcgaagcacgaggtgtgctgccggctgctgcgggaggggcaggtgcaggagcgggcactcgacaccgcccggagcaacctggagcacacggcccggaagctcacgcagcggtattcggatttcgtcaagtgcttctcgcagcagcatcgtggccatgccgagatgctggcgaatttcgagagggatgtggagaggctgcgcgccgtgaggcttcacccggcgctgcaatgcgaggggaggcgctccttgattgacctcgttaaggagaatgacctgaggaagctggcagatgggtgcttcagctcacataaacagtttgatgttaaggtctcacagcacaaggccaaattcatggaattgaagaagaggcttgaaaatttgtttaatattatgagctcgactgggtgcaaggatcttgaggcgatgataaaggaacacgagaaattcatcggtgaccagaaaatcatcatgcagtctctaaggttagacctaggctttgaacatgttttttacctagttatcttgctgttatgttacatgccctccctgaactactattactagtgaattccctgaatcatctaaatttaataattactagtgaattccctgaatcatctaaatttaataatttacgctatgcctttgttctatggcttcactaaactacttaggagaaatttggaaaattgtgcttctattgtgtcactacacgttaagtgtcaccttccactcggaactacttttactaatgattgatctggatcataggtgcggcgtgttttgtgctgtagatcttcatgaaactacttaggatgaggaaatgtttcagcatggttagttgatggttttgcaaaaggaataggaaatctttcagcgtggttacttgatgtctgcaaaaggaatatagcttgtcatcgtacttacttcatttgtttaattatttcatgcactacggttttctacactaattgcaatgtgctcagtatgaccaagtgttttgatgcttatatgattatatgttatatcccactctaagctggaatatcttgtgtcctgcagtaaagatgtgactacttcaaaaaagcttgttgatgactgctcaaactgccagctttctgcatctctccgccctcatgatgcggtttctgcagttggccgcatctatgaagtacatgaaaaggacaacttgcccagtgtccataatatcgatcgcttgttcacaaagttgctggagaaatgcaaagccaagaagaatgaaatgaataccttggtacatgttagcatgcaaagggtcaaatctgctcagattgttatcaaggaaatgatgaacgaactccatgcattccaagaggtgatgggtcatcaagataaaattttcgatagcctaaaacttgccagtggcatgggtcatgcgtacagggcttgtcttgctgaggtcgtacgaagaaagtcttcttttaagctttatactggcttggcagggcagcttgctgaaaagctagccactgagcgtgaagctgaggtaagaaggcgagaggccttctttaggacatggagtaagtacattccagaagatatcatgggttccatgggactttttgattccccaagccagtgcgatgtaacagttgctccatttgattgcaatcttctctcaattgatgttgatgatgtggaaaaacttgcaccccaatctttggtcgggtcttttctgaaatctgagagatcacaactgccaaagtcctccttgagcaattctggtaccagtggaaatttgagtaaatccgagcaatatccgccgaatgctgatgataagatggatttccaagactttctggggggttttgacagtgtggatattgctggaactagtaaattggaagttgaaaatgccagattaaaagcagaacttgcttctgcaattgcagttctctgcagttttggcgccgaatatggatatgaatctattgatgaagggcaaattgataatgtactgaaagatgcaagggaaaaaacagctgcagcactttctgcaaaggatgagtatgctaatcacctgcaggcaatgcttacagcaaagcagaatcaaaatttgtcctatgagaagcgcatccaggagcttgaggagcaattagcaaaccagtacatacaagggcacgtgatttctggaagcaaagatgcatctgattccctcctttctgcatttaaagctaatgactgcaacttgcacatatctggagggaggcaaacccaagtacgcgatgaatcaagtgtggccatggatgaggcctcttcaacatctgagcagccatctaaacaaacagaaggtggggatgagaatatgaccgacatttcaggtgcactgaacttgcaattgctcgatccaatagcacgcactaatttggatgctttcatggcagaattgccacctgatagtgaacataaaattgttgattctgataaggaagggcaagtattgacacagtttactacgactgatacttctggggttcctatagaagatcctcttggcatcttaaactccagaactaacgagcatcatacctcagagctgagaaacaaagagctgcttgtgtcagagttgcaaagtactctggaagacaaatcaaaaaggttagatgaaactgaaagcaagcttaatgccttggtggatgaggtcaactctctgaagaaagaacttgaacacacccagggtctgcttgatgagtctcaggtaagtcaagtgggaggtagaatattcagcaatagttttttttttcatgctcaattgaaattgctgcttactttcttttacaaattttaatatagatgaactgtgtgcaactggagaactgcttacacgaggcaagagaagaggcccgcacaaacaaatgttcagctgacagaagggctgttgagtatgatgccctgcgttcatctgctctgaggatacatggtctgtttgagagactaaataactgtgtcactgcaccaggcatgtctggttttgcggactcactgcgtgctttagctctctcattagcaaggtatcttactgctctcattcgcttaaactcatgtgtagtcagttctgcatttcatttacaaaccacccacccccaagttcgttgtgctgttgggcttgatccatgccaagtctatggaactgataaaataaacaagaaaaataggatcgaaggaacttctaagatttgctgtatcttggttcaacatatccaagttattagtgatttgtgagttggcagtcagtgagaccgacaaaataaacagcagaatagaattcatggtagcttccaggaagtatgtccagattttctgtatcttggctcattgttgagatttagagaggcgctggatgttattttagcgagacatttttgcataatttgtagtaaacagagctaggaagatgttagatgttatttaaccttggcatgctttctacagtgagtagtaaactgttcttatattttgggagatgttcttatattttgggacggagggagtagtaaactgtattttgtgcttacagtgaaatattggtcgtcaaaataattttgtgttccttcagatgattgtatgtttttggtctttttgctcagagtagtttcctttgcatagagttctgttactttataaaagtattagcattttcttcctttggatcccctactgctgtagagttatcgaaacagcagatttactggctgagtaatacttttttattgaaacagtgcaaagaaggatgaaggtgatacaaccattcagtttcagcaatgcatcaagatcctggcagacaaagttggttttctatcacgacagagtgctgagctgctagaacgctactcaaggattgtaagagtgttggaggagaagaaagagtcgattaaaaatttgtacagtaagcttcaactggaaaaacaggtacgagtcgtaacttcttaagccactgtttttattaaaataaatgaattcataagaagccaattactttgaaattgttttagtttaaattccgcgctaatcaataataagcacatattactctatgggttaggttgagtctgttaaattttgttgattgaaataacaagacagtatcctcggttgtcaatactgttcaacaggctagtaaggagaagatatcattcggccgtttcgaagttcatgagctcgcggtctttgttcggaaccctgctgggcattacgaagcaatcaaccggaactgctcaaactactacctatcagaggaatcagtggccctattcacggagcagcatccacggcacccagcttacataatcgggcagattgtgcacatcgaacggcgcatagcaaagctgccctcgcacggtgaccagatggaagcttcacgccttgatagcggtggccgccggtcgcccgcttccatgctgaacccgtacaatctgcctgtgggatgtgagtacttcctggtgacggtcgcgatgatacctgacaatattcgttgaaaacgccttcctgatcatgcctatggctgctgaaatgaagggagaaactctcaactgtaaatatactgaaactgaaatttatagacttccttggttgcttgtggcttcttcatcctttgtacataatgatgatgatcaggttcctttgtaaatagactctcagctaccactgatgttatcatcttcgttcaagcagactgaatattctttcatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0179800, RefSeq:Os02g0179800