Os02g0183500

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Revision as of 02:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0183500| Description = Quinonprotein alcohol dehydrogenase-like domain containing protein| Version = NM_001052639.1 GI:115444648 GeneID:4328...")
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Gene Name

Os02g0183500

Description

Quinonprotein alcohol dehydrogenase-like domain containing protein

Version

NM_001052639.1 GI:115444648 GeneID:4328523

Length

3409 bp

Definition

Oryza sativa Japonica Group Os02g0183500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4650572..4653980

Sequence Coding Region

4650572..4650671,4650755..4650891,4651012..4651205,4651287..4651571,4652111..4652169
,4652469..4652540,4652817..4652925,4653239..4653980

Expression

GEO Profiles:Os02g0183500

Genome Context

<gbrowseImage1> name=NC_008395:4650572..4653980 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4650572..4653980 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtctcgtgctcctcctcttctcctcctgctgatcgtgctctctctcgtcgtcttagcagcattgctcgccgccgccgccgccgatgcatccgcagtggccggaggcggcaggagctcgccgtcgacgacgacgttcgtgctcgccggggagcggacgcggcggaaggatcctctcgatgggctgaggctctactccggcgggtggaacatcagcgacgagcactactgggcctcggtcgggttcacggtggcgccggtgttcgccgcggccgcgatctggttcgtcgtgttcggcgtctcgctcttcctcgccggctgctgcttctgctgctgccccggcagcagccgcggcggcggcggctcgtactcctgcacggcgctggtcgtctcccttgtcctcctcctcgccttcaccgccgccgccgccgtggggtgcggcgtgctgtacgacgggcaggggcggttcgacgggagcacggcggcgacggtggagtacgtggcggggaagtccggcgacgcggtggcgagcctgaggggattcgcgagctccatggaggcggccaaggcggccggcgtggggcccgtgtcgctgccggccagcgtcaaggggagcatcgacggcgtcgtgcgcaagatgagctccgccgccgacgagctcgcggcgcgcatggcgagcaacgccgccaagatccgagacgccttggagacaataaggaagattttgattgttgttgctgccacgatgttgatcctagctgttcttgggctcggttggtgtttcttgggtggattctggttgcagcaacgcttttgctctgtggcaccttccttctgctacacaagtgtagaagttgttatattgtgggataaattttttgagggctgctacaaaacagggtcctgttgcaacggaatagacatattaactattctcttgcacgagtatcacagcgtggtgggtgacacctgcgccgccatgggcgagtgggtgcagcgcccgcaggcgcgcacggcgctcgacgacatcctcccctgcgtcgacacggcggcggccgcggacgcgctggcgcggagcaaggacgtgacgcaccacctcgtcaccgtcctcaacggcgtcatcgccaacgtctccaacgccgccgccgccggcctcccgccgccgctctactacaaccagtccggcccgccggtgccgctgctgtgcagccccggcgaacgctgcgaccccggcgaggtcgacctcgccgccgcgccgcgcgcgtggcgcgaacgcgtgtgccgcaccacccgcgccgcggcggcggcgccggaggtgtgcgccaccgtcgggcgcctcacgccggcgatgtacgcgcagatggtggcggcggcgagcgcgtgcgacgcgctgtcgcggtacgggccggtgctcgccgacatggcggactgcgcgttcgtccggcgcgcgttccgggtggtcggcgacgagcactgcccggggctcggcaggcacagcgcggaggtgtaccggggcttgctcgccgtcgccgtcgccgcgctggcgtcggtggtgctgtgggtggcgcactcgagggagaggcggcggcggcgcgacgccgtggagctcagggcggcggcgtcgccgtacacggtgcatcactctcatttggaggaaggagcgctcttgaagagccccagaatgatgtacagatag</cdnaseq>

Protein Sequence

<aaseq>MASRAPPLLLLLIVLSLVVLAALLAAAAADASAVAGGGRSSPST TTFVLAGERTRRKDPLDGLRLYSGGWNISDEHYWASVGFTVAPVFAAAAIWFVVFGVS LFLAGCCFCCCPGSSRGGGGSYSCTALVVSLVLLLAFTAAAAVGCGVLYDGQGRFDGS TAATVEYVAGKSGDAVASLRGFASSMEAAKAAGVGPVSLPASVKGSIDGVVRKMSSAA DELAARMASNAAKIRDALETIRKILIVVAATMLILAVLGLGWCFLGGFWLQQRFCSVA PSFCYTSVEVVILWDKFFEGCYKTGSCCNGIDILTILLHEYHSVVGDTCAAMGEWVQR PQARTALDDILPCVDTAAAADALARSKDVTHHLVTVLNGVIANVSNAAAAGLPPPLYY NQSGPPVPLLCSPGERCDPGEVDLAAAPRAWRERVCRTTRAAAAAPEVCATVGRLTPA MYAQMVAAASACDALSRYGPVLADMADCAFVRRAFRVVGDEHCPGLGRHSAEVYRGLL AVAVAALASVVLWVAHSRERRRRRDAVELRAAASPYTVHHSHLEEGALLKSPRMMYR</aaseq>

Gene Sequence

<dnaseqindica>1..100#184..320#441..634#716..1000#1540..1598#1898..1969#2246..2354#2668..3409#atggcgtctcgtgctcctcctcttctcctcctgctgatcgtgctctctctcgtcgtcttagcagcattgctcgccgccgccgccgccgatgcatccgcaggtaaagatttcgtgtgcattgtctgatttatcgcggcaagaagtgtgaaattttgatgtgattggtggcggcggcggcggcagtggccggaggcggcaggagctcgccgtcgacgacgacgttcgtgctcgccggggagcggacgcggcggaaggatcctctcgatgggctgaggctctactccggcgggtggaacatcagcgacgagcactactgggccgtgagctcctcttcttcttcctcctcctcctcttgatccatgtccatcctccattcttgttccatggccgtttcttgattttattctgagctcgtcgttcgtgacgacgcgtgcatgcagtcggtcgggttcacggtggcgccggtgttcgccgcggccgcgatctggttcgtcgtgttcggcgtctcgctcttcctcgccggctgctgcttctgctgctgccccggcagcagccgcggcggcggcggctcgtactcctgcacggcgctggtcgtctcccttgtcctcctcctcgccttcaccgccgccgccgcgtacgtataatttctccggtcacctcacctcgccgccggtgagtaaactaaactaaccgccgccgccgccattgtttgcagcgtggggtgcggcgtgctgtacgacgggcaggggcggttcgacgggagcacggcggcgacggtggagtacgtggcggggaagtccggcgacgcggtggcgagcctgaggggattcgcgagctccatggaggcggccaaggcggccggcgtggggcccgtgtcgctgccggccagcgtcaaggggagcatcgacggcgtcgtgcgcaagatgagctccgccgccgacgagctcgcggcgcgcatggcgagcaacgccgccaagatccgagacgccttggagacaatgtgggtaaaaagcttactgatgaatggtaaaataaacagttaatccgtcgtaaaatatagcaacttaaaatcagaaaaaacgtattctagtttgcgaatatagatatttctcttattcagattcgtcctactaagataagatatgcttcattcgattatagattgctatattttataaactacaccccgcagcgcgggatatatagatgaatgtatgttatatattataaaaatgatagatttatatgtttaaataatgtgaagatggtgatttgacattgcttgcgtgttaagttttaaaaatacaactaaattacaaatgatatatcatatttgtatgagatctaaaatactctaaataatagtaattgctagtggatgatgatgtggcataccacacacttgtatgttgagttttaggagttagtgggtaccaattatatagaaagtatagatactgctgttatgagtgttcataacaagtattttccttgatgatgttcatagaaattcttttatttcggttgttctgtttgcagaaggaagattttgattgttgttgctgccacgatgttgatcctagctgttcttgggctcggtgagaaaacaagttcctttcctctttgaagaattgaaattgcaaaaacattttgtaattaatctgtttgtgcgacttatttggttctgcatctttttttctcagcgttctcaatatgcggaatggagtcactcgtctatgtgtaagcatgaaaacactcctttagagttttatgatttcactaattcatttgacatgctgaaattacaaaaaattaaaaagaattgccctagttggcataagattcccaaatattcatctgttactggtgttgagccacacggttgttttggatgcaggttggtgtttcttgggtggattctggttgcagcaacgcttttgctctgtggcaccttccttctgctacacaagtaaggctacgatctttttagtcactccacaaattatttgctccatgtctagaaaaaactattttttatttgcttcacgtctcaaaaaatgatacatatgttccaaaatataaggatgcaggtagaattgaacaagagaaagttaccactggacatggatattaagaaaaaaataagtgatattaaattggagaaaaataataattggttaagaagagaaagtgggtagtcaatttgaatgagggaagattatgattgattaagaatgaaatgtaggtgtagaagttgttatattgtgggataaattttttgagggctgctacaaaacagggtcctgttgcaacggaatagacatattaactattctcttgcacgagtatcacaggtattaggttctaggtatcataggtaccgggtaacaagtatcacaggtatcgggtaccatacagctagtaccactacaagtatcaggtatcaggtattgtctcatagaagggtatcccgtcgagattttctgtaaatttttttagacaaaatattcctagacaaattttaaatgatatacaagtcatattttgtgatggggtatatgttttgtttaaaaactttcttctacattttcaccgttgcttgctgccatggcgacctcacgtacctgctgtctcgacactgagcaaaagaattccttgacgtttcagcgtggtgggtgacacctgcgccgccatgggcgagtgggtgcagcgcccgcaggcgcgcacggcgctcgacgacatcctcccctgcgtcgacacggcggcggccgcggacgcgctggcgcggagcaaggacgtgacgcaccacctcgtcaccgtcctcaacggcgtcatcgccaacgtctccaacgccgccgccgccggcctcccgccgccgctctactacaaccagtccggcccgccggtgccgctgctgtgcagccccggcgaacgctgcgaccccggcgaggtcgacctcgccgccgcgccgcgcgcgtggcgcgaacgcgtgtgccgcaccacccgcgccgcggcggcggcgccggaggtgtgcgccaccgtcgggcgcctcacgccggcgatgtacgcgcagatggtggcggcggcgagcgcgtgcgacgcgctgtcgcggtacgggccggtgctcgccgacatggcggactgcgcgttcgtccggcgcgcgttccgggtggtcggcgacgagcactgcccggggctcggcaggcacagcgcggaggtgtaccggggcttgctcgccgtcgccgtcgccgcgctggcgtcggtggtgctgtgggtggcgcactcgagggagaggcggcggcggcgcgacgccgtggagctcagggcggcggcgtcgccgtacacggtgcatcactctcatttggaggaaggagcgctcttgaagagccccagaatgatgtacagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0183500, RefSeq:Os02g0183500