Os02g0186400

From RiceWiki
Revision as of 02:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0186400| Description = Spectrin repeat containing protein| Version = NM_001052655.1 GI:115444680 GeneID:4328539| Length = 3168 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0186400

Description

Spectrin repeat containing protein

Version

NM_001052655.1 GI:115444680 GeneID:4328539

Length

3168 bp

Definition

Oryza sativa Japonica Group Os02g0186400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4803287..4806454

Sequence Coding Region

4803464..4805665,4806231..4806320

Expression

GEO Profiles:Os02g0186400

Genome Context

<gbrowseImage1> name=NC_008395:4803287..4806454 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4803287..4806454 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacccctctccccttcctcctcgccgccggcgacggcggcggcggttctccgctgcggctccccgtcgtgccgccccgtcacacatgagctgttcaggcagaagttgagtttcatggtgtcatttcaagctcaacatatgagatgtgctcctcatttgatcaaatcagttgttaaaggtattagagcaaatatcactgatggcgagaatggagcaactgaaccagctagggagctattggagcggctgtttgcgaagacgcaaaggttggataccagtgcttcccaggatagtgagctgagtatgagcattgatgtactgaagtctgaatttgaggccgccttgtctaccttgaggaagaaagagagggatctccgagatgcggagaatcgggtttcagttgatcaggtacgcctgaaccgggcgaagaaggatcttgatcagagagagcgtgggatcaatagagcatatgcaaggcaacaggaaatggagagatcactgggtaaggcaagtagagatctggttttacaagtgaggcagatcgataacctgaagcttcttgttgatgagcaagacaagaaaattgccagctcacaagatttgctttctcagaaggtaactgaagtggaaaagcttaagcaagatatgttgaagaagaatgaagaagtaaccttgatgcgttcagagatcaagtccaaggaacagctgcttcttgaagctaatcaggctgctgagcagcaagaagcaacaattaaggagctccggagtgaaattaaaagaaaagaaattgatttttccagatcgaatgaattgagaaaggccaatgaacagaaactaaaaatcgccgagcaagaacttgagaggcagaatatgggatggttagcagcacagaaagagttaaaggaagtggcgcaactagcatgcaaggatatggatggtatcaaggatacagtcagtgacttcaaacgtgtgaggtctctgctggatgctgtacggtctgaactaatcgcttcaaaagaggctttctcctcctctcgaaaacagatagaagatcaagcagtgcagatgcagaaacaagttcaagaactctctggtcaaaggctattgctttcatctttcaaccagaacttggaagctgctcggttggagattcaaggcaaggcaaaggagctcaatgctgcacagtctcgctgtcatgaacttgaatcactgttacttcaggaaaaggagaaggttgagtctctggaagcagtgttaacaaaagaaagagagagcttagaagagaaaaccaaagaagttgagttgcttcaaaaggcgctcgttcagaaggaaaatgagcacagcaattcattaaagcttgttgaaataaaagaatctgagctgttagaagcccgaaatgaagtccaagatatgaaatcaaaggtggaatctatccaaatagctgttcaggagaaggattcagagctttctgaaacacaacgcagacttgctgaagtgaacagtgaagttgttgaactaaagcagctgctagatagcaaggaagatcaacttgttcaggttagaaccgaattacaggataaagaacaacacatacagacactacagaataaattggatagcatgaaattcagttgctcacaagctgaatctgtggtgcaaaagatagctgaactcactggcaatcttgctagttcagtagaaggcgaagagatggacatttatgcattgctggatgatgagatttcgagcacaggtacagccctcaagtccaatttgcacaagcataatcaactggaggctgacatagagatgttaaaagaatccttgcatcagaaggacatggatttaagagctgcccatgaagcacttgacgcgaaagatcaagagctgaaggcggtaatgagaaggtgggatgtgaaggaggaggtagacaagttggaagggttcctgaaagatcctagtgacatcaagagaccttctgatttttccgttcatatggggctccaaaatcttcaaactgaagctgcggaggtggaggcacttgctgctactactacattgaagaaacttgcagatatggctaagggattcctgagaagtggcaaaactgattctggcatcaatctggttgcatcgccaagtgtaaacagtactagaattgtttccaagaccaaaccaaacaaggaaatggatatgattcttgatgctgaaaaggaaattgccgggctcttttcgttgacagaacagctcattaccgaggctggaatagatgttgctcaccaagcatag</cdnaseq>

Protein Sequence

<aaseq>MPPLSPSSSPPATAAAVLRCGSPSCRPVTHELFRQKLSFMVSFQ AQHMRCAPHLIKSVVKGIRANITDGENGATEPARELLERLFAKTQRLDTSASQDSELS MSIDVLKSEFEAALSTLRKKERDLRDAENRVSVDQVRLNRAKKDLDQRERGINRAYAR QQEMERSLGKASRDLVLQVRQIDNLKLLVDEQDKKIASSQDLLSQKVTEVEKLKQDML KKNEEVTLMRSEIKSKEQLLLEANQAAEQQEATIKELRSEIKRKEIDFSRSNELRKAN EQKLKIAEQELERQNMGWLAAQKELKEVAQLACKDMDGIKDTVSDFKRVRSLLDAVRS ELIASKEAFSSSRKQIEDQAVQMQKQVQELSGQRLLLSSFNQNLEAARLEIQGKAKEL NAAQSRCHELESLLLQEKEKVESLEAVLTKERESLEEKTKEVELLQKALVQKENEHSN SLKLVEIKESELLEARNEVQDMKSKVESIQIAVQEKDSELSETQRRLAEVNSEVVELK QLLDSKEDQLVQVRTELQDKEQHIQTLQNKLDSMKFSCSQAESVVQKIAELTGNLASS VEGEEMDIYALLDDEISSTGTALKSNLHKHNQLEADIEMLKESLHQKDMDLRAAHEAL DAKDQELKAVMRRWDVKEEVDKLEGFLKDPSDIKRPSDFSVHMGLQNLQTEAAEVEAL AATTTLKKLADMAKGFLRSGKTDSGINLVASPSVNSTRIVSKTKPNKEMDMILDAEKE IAGLFSLTEQLITEAGIDVAHQA</aaseq>

Gene Sequence

<dnaseqindica>790..2991#135..224#agtccacacgcgtccggttcggcctccacatcatcatctcctctcctctctcgtctccgcgcgccgtgagccgtccgatctcgcgcgggcggccgtgatccgctccctcccccccacccacgtgctaggccgccatgccacccctctccccttcctcctcgccgccggcgacggcggcggcggttctccgctgcggctccccgtcgtgccgccccgtcacacatgtgagcatcccttcccatctcctcgtatctcctctctcgttgctcgttgttcgttgttggtggtgtgtgttctcgttcggtttccgattccgagctcgtctactagcggtttgaaggggacggaggatcggattttttttggttttctagttcaagttgtgctgcctggtagtggtagttttttaattaggagttttttggctgaaattggtttgacggtggtcaattccggtacatctttaaactaatcttgataacggagaacctaacgagaactattagcgattgtagtttgtgtgtggcgatagatttgggatcaaaattcatccgctgcgctatgtcgctttgctgaagattgaaactatgtgtgaataaatatagttctgaatttttagttcagagttaactttggcatactatatcatttcagtcctttggttcaccgggagaattttcatgtacaaataaaatccccatttttgcagataggttcactaggaggtgtcctgttgcaacttttttctagcagtctactgatgcacactgttttctgcaatcccgacaggagctgttcaggcagaagttgagtttcatggtgtcatttcaagctcaacatatgagatgtgctcctcatttgatcaaatcagttgttaaaggtattagagcaaatatcactgatggcgagaatggagcaactgaaccagctagggagctattggagcggctgtttgcgaagacgcaaaggttggataccagtgcttcccaggatagtgagctgagtatgagcattgatgtactgaagtctgaatttgaggccgccttgtctaccttgaggaagaaagagagggatctccgagatgcggagaatcgggtttcagttgatcaggtacgcctgaaccgggcgaagaaggatcttgatcagagagagcgtgggatcaatagagcatatgcaaggcaacaggaaatggagagatcactgggtaaggcaagtagagatctggttttacaagtgaggcagatcgataacctgaagcttcttgttgatgagcaagacaagaaaattgccagctcacaagatttgctttctcagaaggtaactgaagtggaaaagcttaagcaagatatgttgaagaagaatgaagaagtaaccttgatgcgttcagagatcaagtccaaggaacagctgcttcttgaagctaatcaggctgctgagcagcaagaagcaacaattaaggagctccggagtgaaattaaaagaaaagaaattgatttttccagatcgaatgaattgagaaaggccaatgaacagaaactaaaaatcgccgagcaagaacttgagaggcagaatatgggatggttagcagcacagaaagagttaaaggaagtggcgcaactagcatgcaaggatatggatggtatcaaggatacagtcagtgacttcaaacgtgtgaggtctctgctggatgctgtacggtctgaactaatcgcttcaaaagaggctttctcctcctctcgaaaacagatagaagatcaagcagtgcagatgcagaaacaagttcaagaactctctggtcaaaggctattgctttcatctttcaaccagaacttggaagctgctcggttggagattcaaggcaaggcaaaggagctcaatgctgcacagtctcgctgtcatgaacttgaatcactgttacttcaggaaaaggagaaggttgagtctctggaagcagtgttaacaaaagaaagagagagcttagaagagaaaaccaaagaagttgagttgcttcaaaaggcgctcgttcagaaggaaaatgagcacagcaattcattaaagcttgttgaaataaaagaatctgagctgttagaagcccgaaatgaagtccaagatatgaaatcaaaggtggaatctatccaaatagctgttcaggagaaggattcagagctttctgaaacacaacgcagacttgctgaagtgaacagtgaagttgttgaactaaagcagctgctagatagcaaggaagatcaacttgttcaggttagaaccgaattacaggataaagaacaacacatacagacactacagaataaattggatagcatgaaattcagttgctcacaagctgaatctgtggtgcaaaagatagctgaactcactggcaatcttgctagttcagtagaaggcgaagagatggacatttatgcattgctggatgatgagatttcgagcacaggtacagccctcaagtccaatttgcacaagcataatcaactggaggctgacatagagatgttaaaagaatccttgcatcagaaggacatggatttaagagctgcccatgaagcacttgacgcgaaagatcaagagctgaaggcggtaatgagaaggtgggatgtgaaggaggaggtagacaagttggaagggttcctgaaagatcctagtgacatcaagagaccttctgatttttccgttcatatggggctccaaaatcttcaaactgaagctgcggaggtggaggcacttgctgctactactacattgaagaaacttgcagatatggctaagggattcctgagaagtggcaaaactgattctggcatcaatctggttgcatcgccaagtgtaaacagtactagaattgtttccaagaccaaaccaaacaaggaaatggatatgattcttgatgctgaaaaggaaattgccgggctcttttcgttgacagaacagctcattaccgaggctggaatagatgttgctcaccaagcatagcttcagaacccagaaatgtatatcatattgcagttttgcaacatttagatagttgctgtgaagattcagctgaaattgttagcgttttcatttcttttgctttgggtctcatcgccctgtttgctgttggattgctctgctccaagtgcgaaagggagacatcgatgttgatatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0186400, RefSeq:Os02g0186400