Os02g0188500

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Revision as of 02:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0188500| Description = Ubiquitin domain containing protein| Version = NM_001052670.1 GI:115444710 GeneID:4328555| Length = 2371 bp| Defini...")
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Gene Name

Os02g0188500

Description

Ubiquitin domain containing protein

Version

NM_001052670.1 GI:115444710 GeneID:4328555

Length

2371 bp

Definition

Oryza sativa Japonica Group Os02g0188500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4908961..4911331

Sequence Coding Region

4909031..4909361,4909481..4909542,4910171..4910270,4910494..4910596,4910698..4911074
,4911176..4911177

Expression

GEO Profiles:Os02g0188500

Genome Context

<gbrowseImage1> name=NC_008395:4908961..4911331 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4908961..4911331 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagggcgaggcgggtctcgatcggtggagggggaaagatttctcctccagttttcctctagttttgatcctggaggaggtggctgctgcatcttcttcttcaccgaagattggaggagtggatttcgtgtggttgttgcggccgaccgctttcttgctctcttggctcgtcggcctccgccgccgatgctgcgggatgccgtcccccgacgccgccgccggcgatattgagagcgccctcgacgacttcgcccgcgccgacgccgactgcatcgccgccgccctcgcctgcggccgcaccagcttctcctaccgccgcctccccgagccgcgccgcctccgcctcaccgtccgcaagctcgacgactcctacttcgatgtgcaaatcgcgaggtcagccgcggtgtgggagctcaaggcggccatcgaggacgtgttcgccgcgctctacgatgaaacggacaacaaggccatctcttggcagcacgtgtggagccacttttgcttatgtttcaaggacgagaaattgacagatgacaaggcaacattgcgtgcatttggtataagagatggtgatgaggttcattttgcccagcatctttctgttgaatacagaccctgcaagtccctttccctcagaaggtcaaggacttcattggatgatttcagtgctaggtcaaggagtttgttggacgatctcggcgaagatgatggtgataagtttatcgacacgaggcattctactagtgttttggaggaagggctatatgtttatcagcacgatgaggagcgcatggaagagagtcgcaagaagggaggcttctttagcggttggttctcctattctagattgaggggcaacagtaggacacattcagaggatgccatccaatcctcctgcgaaaagagagatactcgaactcggccaaagctggggagatggttgtcttccaaaaaaactaaaggcacatag</cdnaseq>

Protein Sequence

<aaseq>MKGEAGLDRWRGKDFSSSFPLVLILEEVAAASSSSPKIGGVDFV WLLRPTAFLLSWLVGLRRRCCGMPSPDAAAGDIESALDDFARADADCIAAALACGRTS FSYRRLPEPRRLRLTVRKLDDSYFDVQIARSAAVWELKAAIEDVFAALYDETDNKAIS WQHVWSHFCLCFKDEKLTDDKATLRAFGIRDGDEVHFAQHLSVEYRPCKSLSLRRSRT SLDDFSARSRSLLDDLGEDDGDKFIDTRHSTSVLEEGLYVYQHDEERMEESRKKGGFF SGWFSYSRLRGNSRTHSEDAIQSSCEKRDTRTRPKLGRWLSSKKTKGT</aaseq>

Gene Sequence

<dnaseqindica>1971..2301#1790..1851#1062..1161#736..838#258..634#155..156#aacgcagcgccgccgcacgcggcctcctccttcccctcccccctcaacaacccaaccgcctcctcctccaaacaaatccacggggaaccatctctctctcctcgcccccgccgccgccgctgctcctcctccgatcggtggagcagcagccttcatgtacataccatttctttctttcttttttattcttgtttttttcaatttcttgatttcttgatcggtggatttattatttgtttgtgttcttggaggagcaggaagggcgaggcgggtctcgatcggtggagggggaaagatttctcctccagttttcctctagttttgatcctggaggaggtggctgctgcatcttcttcttcaccgaagattggaggagtggatttcgtgtggttgttgcggccgaccgctttcttgctctcttggctcgtcggcctccgccgccgatgctgcgggatgccgtcccccgacgccgccgccggcgatattgagagcgccctcgacgacttcgcccgcgccgacgccgactgcatcgccgccgccctcgcctgcggccgcaccagcttctcctaccgccgcctccccgagccgcgccgcctccgcctcaccgtccgcaagctcgacgactcctacttcggtataccaaatcggctctcttccttcttgccatggaatcccctcccattggatttggggtgacgcgttgctgtgttcgttcgtttcttgctgcttgggtagatgtgcaaatcgcgaggtcagccgcggtgtgggagctcaaggcggccatcgaggacgtgttcgccgcgctctacgatgaaacggacaacaaggccatctcttggtacggctgcatgcacatcaatcttgatttgcaaatgtaccaacaaatgcggcgaaaaaaaaaagtttcccctctttgcattacattgtgaatttctaatattcattatagtttcctatcttggtttgtgaaaatgatttcggtggttcctgagattttttttagtttagtctgtgtgttgggttgatatattggtaactaagcattgttttgcttgttttaggcagcacgtgtggagccacttttgcttatgtttcaaggacgagaaattgacagatgacaaggcaacattgcgtgcatttggtataagagatggtgatgaggtatatgcatgatctctatttgtgattggctcatggatgaatctttagtgccgactaattctcctatttttcttgagtatgtgtcatgtttatgcaattgtgacacattagtacacgatagattgctgtatttgcaaataaaaataggcataatttctttgttcatgcacaagatatgcctatgatattaggcaattttcagaatagacactattgcgtgtgggtaagctctctagtcaagtactaccattgatttgtctgaattcctgttgacttttcatgatgccatttgtggtcctctcacatcaaattattgtttcagttttcagaaatagggtaagagcaaatctaattcagcaaaatcttgcactacttttgatctcttctatttcttggtcttagagatttaggtggttaccgagatcttgcatggtctgttttgtgtaaagaacgactaaactaagaaaaggatccactcttacagctcacatgggtttgactggataagcacattcaagcatgcatgtccactaattacatctgttcgagtcttaagaaatcctttgtaaattgagtcatgattctaaataactctccttgtgtttaccgccttcaatcttttgtgcaggttcattttgcccagcatctttctgttgaatacagaccctgcaagtccctttccctcagaaggtaccctgagcttcaaacgcccctgagggcttttcgtctatttgatctacatcttccattttgtacaactttattggatgttcagaattgatgacattcctaatgatttcttatgttaggtcaaggacttcattggatgatttcagtgctaggtcaaggagtttgttggacgatctcggcgaagatgatggtgataagtttatcgacacgaggcattctactagtgttttggaggaagggctatatgtttatcagcacgatgaggagcgcatggaagagagtcgcaagaagggaggcttctttagcggttggttctcctattctagattgaggggcaacagtaggacacattcagaggatgccatccaatcctcctgcgaaaagagagatactcgaactcggccaaagctggggagatggttgtcttccaaaaaaactaaaggcacatagcaatctagattgccaactgtatctcacacgtgttgctttgttcttctgaaatgaaaatcaaaattacatt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0188500, RefSeq:Os02g0188500