Os02g0188900

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Revision as of 02:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0188900| Description = Cyclin-like F-box domain containing protein| Version = NM_001052672.2 GI:297598731 GeneID:4328557| Length = 3718 bp|...")
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Gene Name

Os02g0188900

Description

Cyclin-like F-box domain containing protein

Version

NM_001052672.2 GI:297598731 GeneID:4328557

Length

3718 bp

Definition

Oryza sativa Japonica Group Os02g0188900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4932808..4936525

Sequence Coding Region

4932808..4933674,4935472..4935627,4935736..4935959,4936474..4936525

Expression

GEO Profiles:Os02g0188900

Genome Context

<gbrowseImage1> name=NC_008395:4932808..4936525 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4932808..4936525 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatggcggtttcccgcgcggcaagcgcgggcggaacgccaccgcaaccgctggcccagactttctcagcgccctccccgagggtatcctccaccacatcatgtccttcctgaacgtgcgccaggtcattcagacgtgcgtgctgtcgtggcggtggcgcgacctctggcgctccgtgccccgcatcaacgccaactactgcgagctcagcatgtccccgatcgccgccttcacaccagacaacgaggcggcgttcaagaggttcgtcaaccggctgctcgagcgccgcgaccccgccgccgtcatccacaccttcaacctcagatacaccatttccaacccaaacaaccgcgataacgactcggcggacgccaacaggtggatcagccacgcgttgcagaatcaagctagtttcctcaagatcatcgtggatgcgcacgaattgcacctcgatcacacggtgttcacatcatgctacttgggtagaatcactctcaagaatgtgttcttggaccaaggcttcttcgagcagctggagattggctgcccactgctgcaggatctcctcttgtacgactgcatcattggagatgatgagatctcatctgagaccctgaatgttctcaccatgtatggatgtcagttcccaactctgcaggagagctgcatttctgcgccgaatctgacatctctgatcatgcatcagcctgagaacttcgtgcccgtactggacgacgtcgcgtcgctggtgacggcaacagttgacctgtttcctctcatcgaattttgtgcttatgacatgcgccagttgctctggagcctttctggtgttagaaatttggacctcgattactatgcgtgtaagatgacaataaaaaacaatcctcagttatgcccgaaatttatcaatcttgtcgacctgactctcggacaatggtgtctagattcagacttctacgtgttgattattttccttcagagctcaccaaaactggaaaagcttactctgaaactcgaaaagtattatccgcatccatatgaacatatcattggtgatgagcttacagaaagatcgtttacatgtgagcatcttaagattgttgagatcatatgcatggaggatgatgaacccctggccaagatcgtggaaggcttgtttgttgacaatggcatgaactctgttcggtttgatatcaaatattggagtcagatcccgtttcagttacctgcattttaccgagaattgctcatatttgcaaaatgtattgcaaacaaactggaaaaggtacagaggtaa</cdnaseq>

Protein Sequence

<aaseq>MNGGFPRGKRGRNATATAGPDFLSALPEGILHHIMSFLNVRQVI QTCVLSWRWRDLWRSVPRINANYCELSMSPIAAFTPDNEAAFKRFVNRLLERRDPAAV IHTFNLRYTISNPNNRDNDSADANRWISHALQNQASFLKIIVDAHELHLDHTVFTSCY LGRITLKNVFLDQGFFEQLEIGCPLLQDLLLYDCIIGDDEISSETLNVLTMYGCQFPT LQESCISAPNLTSLIMHQPENFVPVLDDVASLVTATVDLFPLIEFCAYDMRQLLWSLS GVRNLDLDYYACKMTIKNNPQLCPKFINLVDLTLGQWCLDSDFYVLIIFLQSSPKLEK LTLKLEKYYPHPYEHIIGDELTERSFTCEHLKIVEIICMEDDEPLAKIVEGLFVDNGM NSVRFDIKYWSQIPFQLPAFYRELLIFAKCIANKLEKVQR</aaseq>

Gene Sequence

<dnaseqindica>1..867#2665..2820#2929..3152#3667..3718#atgaatggcggtttcccgcgcggcaagcgcgggcggaacgccaccgcaaccgctggcccagactttctcagcgccctccccgagggtatcctccaccacatcatgtccttcctgaacgtgcgccaggtcattcagacgtgcgtgctgtcgtggcggtggcgcgacctctggcgctccgtgccccgcatcaacgccaactactgcgagctcagcatgtccccgatcgccgccttcacaccagacaacgaggcggcgttcaagaggttcgtcaaccggctgctcgagcgccgcgaccccgccgccgtcatccacaccttcaacctcagatacaccatttccaacccaaacaaccgcgataacgactcggcggacgccaacaggtggatcagccacgcgttgcagaatcaagctagtttcctcaagatcatcgtggatgcgcacgaattgcacctcgatcacacggtgttcacatcatgctacttgggtagaatcactctcaagaatgtgttcttggaccaaggcttcttcgagcagctggagattggctgcccactgctgcaggatctcctcttgtacgactgcatcattggagatgatgagatctcatctgagaccctgaatgttctcaccatgtatggatgtcagttcccaactctgcaggagagctgcatttctgcgccgaatctgacatctctgatcatgcatcagcctgagaacttcgtgcccgtactggacgacgtcgcgtcgctggtgacggcaacagttgacctgtttcctctcatcgaattttgtgcttatgacatgcgccagttgctctggagcctttctggtgttagaaatttggacctcgattactatgcgtgtaaggtaatgcttattgatcttacatattccctcttgtttagcttggtacttaacagttgtaatagaaaatgcaacctgtctctgacttctcggtgattctttttcttttaattatgttgccgttactagcgtatataagtgagaaataaaaaaggtgacgtagagatggaaaatgcgaatgaaatctttaaatatatattattttgttgtaattttgtgtatatacatatatatgttttaaaaatatttaaagaaatatacattccccgtgtggtagaggcacgtgggaacgatgggaggggaggtggcgtggagccaacacacgcgtgcgccatcgcagtggccggcactgaagcatatggtcccgtgcgaccaatccgttggaccatgtcggtccaacgtgaccaatccgttggaccgcccctccatcagtttcatgccttcgagctacgtcgacggtgcggtagcgtggcccgaacccatggagaatgtatagttccacaaatattttaaaaatatgtatatatatatatatatatatatatatatatatatatatgtaaaattatgaacaataatgtatattttaaattttagttctggaaaatgcttcaactattgttaaaacatgcactcccacaaccacctgatggattacttcagcaattgttgatccacagtgtagtgggacatttaactatttaccacttttaagacgtggtatttaataatttgctactcataatctgtgacatgtggattcagtggaaaattattaaatgccacatttaagagtggcaaataattaaatatctcagtagtatttagttatcttactttcatagagactagaaaaggcgataagtttgcatatatgggtgttccagtttctaggtctcgtttttcatgtgcatgcttcctaatctattaaacggtacaatttttgtaaaaagttcttagggaagttcctttagaaaaaaaatcatatcaatccatttttaaagtttttagttgatacttaattaatcatgcactaatctaccgctccattttgcttgtttgaagggttagttcccaacatatactaacgaacacaatgagctacctgactttgaggaagttttgtatataatttggtataggtgtattgtgaccttctaagagcaagtttaataatagtatagtcaactactacctttaaaaattggcacatcatctataacaactttaatagcctacctatacaatagttttatataaatacatgatgcaccattattatttgacccacctctacacatataatattttagagtccaatctgtagcccatttttcttcgaatttgttttgaaaatatattattttaatgaaaaattaaaaaatagaagctgttcggctacaatctcaagtttaataccctgtcgaacaaccgcagttgggcaaggttgttggtccactaaaaaaaataaaaagtacatgaaagggcattggcagggggcctattgaactctgatgttcgataggtcctacatgcacacagtggcgtacagtggttgttctcttttttatttacttttttttatcccctgtcgatatataccctgttgaactttgcttgtttgatgggcgctaaacttgtaattttagtctgttaacctctattttgcaattctctattaaaaaggtattatttctaaaaaaaatctttttcttctctctcctctcctctatctttcacatgtgtttgtatctatagcatgctcttctacatggtctaataatcatttgaatcgtgcagatgacaataaaaaacaatcctcagttatgcccgaaatttatcaatcttgtcgacctgactctcggacaatggtgtctagattcagacttctacgtgttgattattttccttcagagctcaccaaaactggaaaagcttactctgaaactcgaaaaggtaaatgattttcttcaaatgtatgctgatcctatttattttaaaccatttcctcacgagtacgtcttttcgggatacaacttacaagttcttttttatctgatgcagtattatccgcatccatatgaacatatcattggtgatgagcttacagaaagatcgtttacatgtgagcatcttaagattgttgagatcatatgcatggaggatgatgaacccctggccaagatcgtggaaggcttgtttgttgacaatggcatgaactctgttcggtttgatatcaaatattggagtcagatcccgtttcagttacctgcattttaccgagaattgtacaactgaaatgtccaaggatctattcagttgttgcctcattaagcttctctttcttgagagggctggatttatatacattttgattccaggtgacttttggaaggacatgtagacatgtttacatgcgatttgcgaaaaagaaaaaaagaatagttgcttcatttgcttgtaagctggacggtcagctggtgttgtactcttgtactgttggatgatgttttgttcttccagagtggatatcttttttggctgcaaaaacataaattgtgggggtgggaatagtttgttttgatcttctggctgagttattttaaggcatatacacatgtttcctgctccttttggtgaaaatttttaaggcataaaacttctatgtttttaatgtgcataatttgggcaggtttaacactgggtaacaggatgaaaaatggtcatgtaggattatgaattctccatttttactcaactataggataacattgtataatatttactcttttataattataggctcatatttgcaaaatgtattgcaaacaaactggaaaaggtacagaggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0188900, RefSeq:Os02g0188900