Os02g0190200

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Revision as of 02:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0190200| Description = Conserved hypothetical protein| Version = NM_001052684.1 GI:115444738 GeneID:4328569| Length = 10730 bp| Definition...")
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Gene Name

Os02g0190200

Description

Conserved hypothetical protein

Version

NM_001052684.1 GI:115444738 GeneID:4328569

Length

10730 bp

Definition

Oryza sativa Japonica Group Os02g0190200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4987254..4997983

Sequence Coding Region

4996447..4996455,4996534..4997238,4997397..4997720

Expression

GEO Profiles:Os02g0190200

Genome Context

<gbrowseImage1> name=NC_008395:4987254..4997983 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4987254..4997983 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaaaggccaccgacgacaatggcggcggagacggcgaagacggtgccgccctggtatccatggtacatgacgaggcggctgccgtaccagacgttgaaggcccagatggcgaaggtgatgccgttgctgccgacggcgatgcccttggcgagcccctgcttgagcccgagccgcgccgactcctcgagcgctgccgagaactgagccatggtggtccgctccgccacgaacgagtacaccgtgcgcgccgacgacacggcctgctcggcgatggcgccggggcgggtgtactgctccctgatccggcgggcgaggccgacgaggatgcggccgtacatgaaccccgggatgatgagcagcaccaccgacggcagcgccaccagcgtcagccgccacagcagcgcgaacccgacggcgtagctgccggcgaacatggcggcgttcatgacgaagttgggcaccttctcgctcagcacgtcctgcaccacgaggctgtcgttggacacgctggtgatcacctccgccgtcgaccccttcttcaggtcgaagtactccacgtcttgccggagcaccgcccgaaggtaccgtgcccgcatccgcgatgcctgccgctccgccgtcctcgcccagcaatacccctctgctcacacacacgacacccctcgccggcggcgtcagctcgccgtcgccgcagcattggcatgcaacagttcaggatcgagctgggcggcgaggagctacaaggtacgtaccacgttgaccttggagctgaactccttgacgatgtcggcgccactgccgaggtcgttgaagatgcggctggtgatgagcagcatcaccggcgtcgagatgccgtcgcccatggcgcccagaagcccaagcaccatcagcgccacgtccgccgcgtccgcgtgcatgaacactgtcatgaacgacgagaacaccggcctcgccttcgccttgccggcgccgccgtcgccgcctcccatggccgtcgtcggcgagttctcagctatagcttggtagctatctag</cdnaseq>

Protein Sequence

<aaseq>MQKATDDNGGGDGEDGAALVSMVHDEAAAVPDVEGPDGEGDAVA ADGDALGEPLLEPEPRRLLERCRELSHGGPLRHERVHRARRRHGLLGDGAGAGVLLPD PAGEADEDAAVHEPRDDEQHHRRQRHQRQPPQQREPDGVAAGEHGGVHDEVGHLLAQH VLHHEAVVGHAGDHLRRRPLLQVEVLHVLPEHRPKVPCPHPRCLPLRRPRPAIPLCSH TRHPSPAASARRRRSIGMQQFRIELGGEELQGTYHVDLGAELLDDVGATAEVVEDAAG DEQHHRRRDAVAHGAQKPKHHQRHVRRVRVHEHCHERREHRPRLRLAGAAVAASHGRR RRVLSYSLVAI</aaseq>

Gene Sequence

<dnaseqindica>9194..9202#9281..9985#10144..10467#acccaccccgccgtgagcgaaccctacccagacctcgccgggaaccagtccaagcggaggacgccgccgatcactccgacgacgaggacgcccgcccggtaccctccccgcccccgccgcctctcgctttgggttctggttgtgacctccctctccctcgcaggtagcgtctctctggaggagatcaagtacgtgaggaaggagacaaagatgctgaggaggaggatctcgttatccaggacaggaggccgccgtcaccatcgaggattccaacatccgcgtttaacttcgtgtgtgattcctcttgccaatattttgcttcattcatcttgtgatgccggaattgaagcgagcgaggcgtgcgtgcgttgcgtgggtctgatctttgaaggttgagatatgtggagaatgagctgttgaagaagaggggccaagaagattgatgtgatagacaaggaggagaaatgaccaggtcgatgagctcaaggtttttagccgagtagagcttcgatgtactcctgtaagcctagatttttcatggttttgatgtgttgtgcgttgtaatgatggtgccaatctgtttttttgcttataggttaggaagaactcggaagagagctcaacgcagtggatcaccggcattgctgaagttcatctgcctattgtgtaagttcttgtgctccttagtttgttcatgtttattaaagtaagtttgcactgctttgtaccatcatatatgcagatcatcacccaaaagtacgttctaaactatactggcgtgaataatctagttatggaattctctaggaatatttctggccataattgatgatctgtgaaccgctggttttgttttactgcaagatattggtagttgtcatatgaaattctcgacattaggtttaaggcagattggagaagtggcattagttagggaacccctttagttcatatgattatttgtactccttagtttgcaagttttgatattgggacatgggtattagtgcttgacatttccgcaaaaaaacgccttgtccttacctgttgaacagtatattgaagttacagcaaggaagttttctgtttagttcatggctcactacgttcttaggaaaaaaaagtgtgaactggaagcagttgtgtatataataatcacatatttgaaagccgagaatgttgaatttcacattttgcaatgcttgtgaaatttacaagccaattgtaggtaaaatcgattagttctgctccaatccttttgctttgcgatgctatcactcgattgtaaggagcatcattctgaacttacacttaaccttacatcttctgaaatcccatttggggtccatgtgggatgtagaggctggattgatatccattatctaaaaaatattctgaaagcccataagggcaataattctttcaatatataatacctttttgaacatagtttctgctacctgtgatacactgatcatgatgttacactgttactagtctgtgtggtactgtgttcaatagctatagcagttttcaatcaatatggcaaagaagaataaaaaaaatgcaacctaatatacaacttatctcatcattacagtacagtcccagcagatatttcaagaaaagaaaactacaagcttcatacacttctatatactaatagagcaatgggagaaaaaaaaatcccattgtcacaaaatttcaaatgataaggagcatccttgcttgcagttctgacgactgatttaaactggggtgtgaatttggaaatgcaagctgtgttgtgatgcaaaacctcagtgctggacctgctgattgcctccttgttgcaaattaaccaagctaaaatatgttccagagaggcccttggccatgagggatgcgtgtgtgcccttctccacaactgtccctttttcgagcacagtgataaggtcgcagttttgtatagtgctgagcctgtgtgcgaccaccacacttgttctgccaatcatcacccgatccagtgcctcttgtaccactttctcagactggctgtctagcgcacttgtagcctcatccagaagtaggatagctgggttcttcaggatggcacgggcaattgcaatgcgttgtttctgccctcctgataactgaactcctctctcaccacaccacgtgtcatatccatccttcaggttgctgatgaagtcatgtgcattagcagatcttgctgcatcctcaatttccgcctcactagccgtttctgtgccatacacaatgttttctctgattgtacctgcaaatagtgttggctcttggctgaccagtccaatgtgccgccgcagggctcgaagattatatgctttgatatcccttccatctatcttcaccgaccccctaattgggtcgtagaacctctctatgagcccaatgatggttgacttgccagagccactttgcccaaccagggctgttgacttgcctggttggatgctcaatgtgaaccctttgaagattataacatctggccttgatgggtatgcaaaatcgactcctctgatgtccacctcgcctttgagcttctctggcttgtatccctgagggttgtcaggatcaatttctgtttcccggtcaagaacagcaaatactgaagcaactgcatctgcacccttagctaggtctgttgtcatgcttcctgcatctgcaatcacacgacctgtgcttactagaatcatgaaggtttggaagagctccttagcactaatgtggtgctcagccataagcctgccaccataccaaaagtcaagggcccatgtgcatgtcataaggctcatggaggtgccgagtccgagccctgcaaaccatgattgccggatgctttccttgcgtggtccatcttgtgattgttcaaaaaggcgtaagatgcgctcttgggatgagaaggctgtaattgtacgaagattggagactgcctcagcagctagcttgctactttcagcttgtgcatgtattgatttcttggacatgctcttgagtaagacacggcgagcataaaagcaaacaatgatcagaggctgcactgctatcataacaagggccaaacgccaggcaatgaccagacccatggtgcatgcaataagcactgctgaaatagtctggatcaccagagccattcgatcacccacgagagacctcacctacaacaacaacaaaagtatggcaggtcagtcacaattccattttaattatctacaattctacatacttattttgatatatggacttacaacgttggcgtccttagctagctgtgagcatatggcaccactggagttctcgtcacggtcaaaccacccaatttcgaaggtgaggatctttgcaagcatctgctccctgattctcttggtgaggtattcccccattgcaccaaagttgtaatgctgaccaatatttatcaaaaatgagagcactgctagacctacgaagatgagtgcgtaggtccttgttttgtccttgatctccgcatgatctgtcaagaagtagactgagatcatgcttcccatggcatatgcatatgctggctggatgcctccaaacacaactgcgctaaaactccccattagtgcttgcttccactctggtgcattaagcataagtagccttctgaaggatggcactggaagctttggcttctcagtgttgtcatcatctcttgcatcacccaatgaccttgctgagcttgacctgctagctgcagagaacctcctgctcatgctgtggctgctggactgccctacagcggatgtactaccagttacaccaatctcatcaatctcatttgaatctctggtctgttgaaggcgcacaagagatgaatagaggccattatcattggcaatgagctcatcatggggtcccagctccttaacctcaccggactgcatgacagcaattatgtcagcattgcggatagtggataggcgatgtgcaatcacaatagtagtccggcccatagatgccaggtcaagggcctcctgtacaacgcgctctgactcagtgtccaatgcactagtggcttcatcaaggaggaggatcttgggtgatttcaggattgctctcgcaatagcaattctctgcttctgccccccagacatttggacaccacgctcgcccacctgttgtttttatttcaaactaggtcattactaggataggaatgctgatatgataaacgtgtttgaaatgcttaacagtatgtgcaaatattgacctgaatacgttcttaaaaaaaaacatgctcagttgataagtcctatagacactacgaaagcataattatgctaaggatattgttatcttgtttcaagggtgacatcagttttgtttttcgagaaaaaagttggctcatcatttgattgttagacgtgattattcttacccttttgtactaatcacaaacaaacataagcactaactgatgagagtgaacttcataaactgtgggtgtcggtatcccatctgttccatgaagatttctaaaatctttgtgcagcatttataaatactttcccagaatactgagttcaaatcatacccttatatgtaataatactctgttcccttgcccacatcaaaagcctggttttaaaactgatcgaagctctgaggcgcagtgttaaaaaatagtcaccactgctttaggggatgggataggcacatcaggttatcttgattccttagtaattttttttcagtagttgtacagttatgcttgacatattttaaaaggttcaactagtattctgcatttctgccgtactgatatggaccatctttctttcagatttatcttctaggaaacaagttatgtttcctggcgaataaaaaagaagtcaagaggcaaaacttctatacaaatagaaagatgcaaggtaatggttatcaagtatcaacatgaaagggccttttccgtatttgtacgagtgagtatgaaaggtctagtttggtcctctaatattagatctaaaatactacacgtgtgtcaatgatcagtgcgtacatgctctgaaaaaagcttgacgaactaatagttacgatatttatcattgaatactgtagacgcactagcagaattttactatttgtcattttgtatcactctttcctatcatgttcctacgagtgcttgaacaatgaaaaattaaagtaaagttatcaagtgccttccattattattgttgaactcacagcattgcagatattaggtggtaggtatctgatggagaggatattttttagtggcctgtcaggtcatcttgttaacaggtttgcccacatcaaaatctaatgttaagtgccccacagcaggtttgcacaaagtagaaattgctagtgctgcgggtccaaccatgaataaacctttcatgtttcaaggtttacatgcatgccacctaaggatccatatcattacagtgattttccattattagccaaaaaagagagatactcttttaccattataagttttggttattttgaatgattcgcattggcagcaaagggacaaatcaaaactataacgtgagaatcattttaattttccataggtaaaactgccttttgaatgcgctcatgtcacacgcacatgggcaatttgttctgtgaaggtctaatatattgctgtcaaaatcgttagagcatgataggtcctgggtgaaatcctatttctgggaaagttggagcaccataaaattgttgactgggaatcccttttctggtttctagatttgcaaaaagcctctagctgtttaccttcagtgtccaccgaccatggagtcacaccctgagtggtgggccaatggttccttgcctttttcacttgcgctcattgtgttttaaggttgctagttttgttgccatggttacggttgctataatgtgtttcttgttcttcaggttttttgtctggttttcccaaataaaccgttcactgcatggtttggcctcattctctccttaaaatgagaaaccttattctttaatataacaccggcaaattcgctttgatctttcgaaaacaaaacttggactaatcgctctacgactcctatgtctcaccatcagcaatttcccagagcagatgctttcaattttgataccgccatcactagaaatgaatctcgatggaatggtctttatagcagccttagaggtagtgctgcagctgtacgttatatggaaatatggccatctacatcatggaggatgagttgagtcgtgatcatgttggaagtgagatagagaaaccaggcattaagcaattgaggttatgagcgtggatcgcttttgtctacgtccacatgcggaagctgtaggtcccactatagagtgtataacgacagattttttgtctaagggatatattcagttctatgtcctgattctttttgcaagtcatgtatggaaggtatctactagatcattcattcaatattgagaatgaaattatttctcatccaattttggatggatggtggactggcaggtctgctggagaggaactatgctgaagcagcggcaaggaaagctgcacctcaaggtgactacctgttcatcccaggcaatgtgtaacaatttaggtgtttctgtgacagcccagagttattttttgtgttcttttttgttctgctgtggttattcatgcaatgtatacgatcttatgatgtgattatcagatgcaccgagtttaagcctttagcttgtttgttttatttgttctcactttcaggactgccatagtcttcagcgcctgattgggggtatgtattttcactcttcaggtgtccataatttttactgctttactgaaaacatcttgtagtgaactccttgttccatgatcttttcattgctcttagttcctgattaggttgtatcataccagaaatatgaagtatgattaattatatatgtttgttccctaatagtcctgggatacttagataatttagagtgctcaaaggtacccttccctaatgtaagccttcagctcaacctattcaccgagacatgtacataatggattcctatactattttaaccatgtgaagcactttcaagctattgattttttttaattgattgctgtcctttcctgtataatgtcataccataattatatggttttcttgttacttccagggttttttttgggttttttttttatttcagtagggataacattaaggtcttgtttggatttaagccaaaacttttttggggtttgctaccaatttttttaaggtttactttttggggtttggtaccaatttttgtttgtgccaaaacttgctaaggtaaaaactggcttcaaaccaaacaagccataacataatttaggcgtgtcattattttggggaacaaaaggcagacagctctctgaatctcagattgcatcagtgccttttttttttctttttaattttcttctcttgagcgcacaagcaggcaggagtgcaggaccgtgtcctctgccagtgacgtggcgcctgcaaattatagctagccagcactaataacagatggatggagtaatgtgtgtgtgtgattatgtgttgcttccaaacaaagtctatactacactagaaacaaaaggtgttgcttccaaaaacagcttttactccttgctatcaggcttgaaaataaattaataatactccctccgtatctacctttatcctaagtcaatttttagaaattcgtgtagtttaacaacatgtaaattgtatattacaaaagtgatggccaaaaatacaaatatttaattaaggataaagctaaaatgactgatcatttaaacggagggagtattagaatggtgtcccaaagccacaagcaacctttttttttaaagactagttgccacctaatcttgtctgatcagttggggtacaacttatttggctagattatgttcgaaatattctactattctagtcctgctgtcacattatgaacctacgactaaactactaactcctatagacgtttcaaaatgttgggtatttgcacatggatcacagaaactctaagaaacagttcatgcactcactcactcatgtacctggagtttgtcccctggattcccttgactttcatgtgtgtgaatttcatgatcatagttttatagcactgtgctggctggggtcatgtttcccatacatatgtgatatgttgaggatgtgtcttttcactgaatcagatagcacttcccaactgtagttcagtttttttattgtctaaggaaaaagatgcatatatagcatgcatgcaagttacttactccaattgcaatttatccatttattggttaaaaaaaaattggattcatgacatgcatgcaagttactctagtcgcaattcagccattttttttatttaaaaacaaatgagaataggatgcatcacatgcatgcaagttactgctagcttatggtcatgatagcaacagaaatctttgaaaagaaacctggacattgacttgcaaagataagaaactttgtgctgaaatgactgcatatttgcatatatgccaaattggcttagtggaagtagttgtattaccagtggagagattgatgctaattctgagataattttacctgtgtgtcgtagccctgaggcagctgggagatgaagttgtgtgcgttggccgccttggcggcggcgaccacctcctccgccgtggcctcctcctttccgaacaggatgttctccctgatgctggtggcgaacagcgccggctcctggctcaccagccccatctgcgctcgcagccactttagccggagcctccggatgtccacgccgtcgaccatcacctcgccggccgacgggtcgtagaaccgctccagcagcgcgatcaccgtcgacttgccggacccgctaccgccgaccagcgccacggtgcgccccgccggcacgcggaggttgaagctgacgaagatggggctctctggccgcgacgggtagcagaactccacgttccggaactccacctcgccggtgacgttggccagctcctcaccggtgtcgctctcggagtcgatcttcggcacccgccggatcacctccaggatcctctccgccgccgagctcgcctccgagaagtacttcacgttggacagccccgaccccagcgctctgcaatcccatgcaaaaggtacgtcaatggcgtctcgccaccgtcaagaattatgaacaatggatcaaagtcaccgttgatgctttttacgcacaggccaccgacgacaatggcggcggagacggcgaagacggtgccgccctggtatccatggtacatgacgaggcggctgccgtaccagacgttgaaggcccagatggcgaaggtgatgccgttgctgccgacggcgatgcccttggcgagcccctgcttgagcccgagccgcgccgactcctcgagcgctgccgagaactgagccatggtggtccgctccgccacgaacgagtacaccgtgcgcgccgacgacacggcctgctcggcgatggcgccggggcgggtgtactgctccctgatccggcgggcgaggccgacgaggatgcggccgtacatgaaccccgggatgatgagcagcaccaccgacggcagcgccaccagcgtcagccgccacagcagcgcgaacccgacggcgtagctgccggcgaacatggcggcgttcatgacgaagttgggcaccttctcgctcagcacgtcctgcaccacgaggctgtcgttggacacgctggtgatcacctccgccgtcgaccccttcttcaggtcgaagtactccacgtcttgccggagcaccgcccgaaggtaccgtgcccgcatccgcgatgcctgccgctccgccgtcctcgcccagcaatacccctctgctcacacacacgacacccctcgccggcggcgtcagctcgccgtcgccgcagcattggcatgcaacaggtaaattgatcataaatgcaagctcacctaggaacgccatcacccaagaggcggcggccaagaagacgaggttcctggcgttctgatgaattcgacatcatttcaaatttcaacggcaaattcaatttcaatttaattcaattcaatcatcatttcagttcaggatcgagctgggcggcgaggagctacaaggtacgtaccacgttgaccttggagctgaactccttgacgatgtcggcgccactgccgaggtcgttgaagatgcggctggtgatgagcagcatcaccggcgtcgagatgccgtcgcccatggcgcccagaagcccaagcaccatcagcgccacgtccgccgcgtccgcgtgcatgaacactgtcatgaacgacgagaacaccggcctcgccttcgccttgccggcgccgccgtcgccgcctcccatggccgtcgtcggcgagttctcagctatagcttggtagctatctagctcaatttgctgtctccaagtgtgacagctagttgtaattgagttggtatagctttggcctcttcttttatttttttcaggccgtttagatggtaacctctctgacttgagagagttagagaggccttgtatatacggagtatatagtactccagtttagttgccatgccagcagttgcatgcactagtaagcaactagtctctcggtttcatattacaactcgttttaactaagtttatagaaaaaacatagtcgtattttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0190200, RefSeq:Os02g0190200