Os02g0190600

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Revision as of 02:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0190600| Description = Lycopene cyclase, beta and epsilon family protein| Version = NM_001052686.2 GI:297598739 GeneID:4328572| Length = 11...")
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Gene Name

Os02g0190600

Description

Lycopene cyclase, beta and epsilon family protein

Version

NM_001052686.2 GI:297598739 GeneID:4328572

Length

1106 bp

Definition

Oryza sativa Japonica Group Os02g0190600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5028608..5029713

Sequence Coding Region

5028910..5029713

Expression

GEO Profiles:Os02g0190600

Genome Context

<gbrowseImage1> name=NC_008395:5028608..5029713 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5028608..5029713 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caggtcgcctatggcatcctcgccgaggtggacggacacccgttcgacatcgacaagatgctgttcatggactggcgcgacgcgcacctccccgaggggtccgagatcagggagcgcaaccgccgcatcccgacgttcctctacgccatgcccttctccccgacgaggatcttcctcgaggagacctccctcgtggcgcgcccgggcctcgccatggacgacatccaggagcgcatggcggcgaggctgcgccacctcgggatacgcgtccgcgccgtggaggaggacgagcggtgcgtcatccccatgggcggcccgctcccggtgctcccgcagcgggtcgtcggcatcggcggcaccgccgggatggtgcacccgtccacgggctacatggtggcgcgcaccctcgccactgcgcccatcgtggcggacgccatcgtgcgcttcctcgacaccggcagcggcgacagcgcgttcgccggcgacgcgctgtcggcggaggtgtggagggagctgtggccggcgcagaggaggaggcagagggagttcttctgcttcggcatggacatcctcctcaagctcgacctcgacggcacgcggcgattcttcgacgccttcttcgacctggagccgcgctactggcacggcttcctgtcgtcgaggctcttcttgccggagctcgccatgttcggcctctccctcttcgccaaggcctccaacacgtcgcgcctcgagatcatggccaagggcaccgcccctctcgccaagatgatcggcaacctcatccaggacagagataggtga</cdnaseq>

Protein Sequence

<aaseq>QVAYGILAEVDGHPFDIDKMLFMDWRDAHLPEGSEIRERNRRIP TFLYAMPFSPTRIFLEETSLVARPGLAMDDIQERMAARLRHLGIRVRAVEEDERCVIP MGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLATAPIVADAIVRFLDTGSGDSAFA GDALSAEVWRELWPAQRRRQREFFCFGMDILLKLDLDGTRRFFDAFFDLEPRYWHGFL SSRLFLPELAMFGLSLFAKASNTSRLEIMAKGTAPLAKMIGNLIQDRDR</aaseq>

Gene Sequence

<dnaseqindica>1..804#caggtcgcctatggcatcctcgccgaggtggacggacacccgttcgacatcgacaagatgctgttcatggactggcgcgacgcgcacctccccgaggggtccgagatcagggagcgcaaccgccgcatcccgacgttcctctacgccatgcccttctccccgacgaggatcttcctcgaggagacctccctcgtggcgcgcccgggcctcgccatggacgacatccaggagcgcatggcggcgaggctgcgccacctcgggatacgcgtccgcgccgtggaggaggacgagcggtgcgtcatccccatgggcggcccgctcccggtgctcccgcagcgggtcgtcggcatcggcggcaccgccgggatggtgcacccgtccacgggctacatggtggcgcgcaccctcgccactgcgcccatcgtggcggacgccatcgtgcgcttcctcgacaccggcagcggcgacagcgcgttcgccggcgacgcgctgtcggcggaggtgtggagggagctgtggccggcgcagaggaggaggcagagggagttcttctgcttcggcatggacatcctcctcaagctcgacctcgacggcacgcggcgattcttcgacgccttcttcgacctggagccgcgctactggcacggcttcctgtcgtcgaggctcttcttgccggagctcgccatgttcggcctctccctcttcgccaaggcctccaacacgtcgcgcctcgagatcatggccaagggcaccgcccctctcgccaagatgatcggcaacctcatccaggacagagataggtgaggtgaggatctgcatcatctctcatctcaagatctgcatttggatcactgaattttgctgctgctgctgctgctgctgctgctgaatgtatccaagatttgcaaagatgagaacaccattagcagcagcaagctaggagacaatccatccaggagatgaagtgtgtgagttgagtaacaattgctgctgcaaaacacactcttttttaagcctggtgattacaaaatttgagctgtatagttcatatttgaggtatgatgatgtgcctctcaatgtactgtataaatgtcatgatgtcaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0190600, RefSeq:Os02g0190600