Os02g0192500

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Revision as of 02:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0192500| Description = Similar to Cellulose synthase-like protein (Fragment)| Version = NM_001052699.1 GI:115444768 GeneID:4328585| Length ...")
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Gene Name

Os02g0192500

Description

Similar to Cellulose synthase-like protein (Fragment)

Version

NM_001052699.1 GI:115444768 GeneID:4328585

Length

7100 bp

Definition

Oryza sativa Japonica Group Os02g0192500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5151783..5158882

Sequence Coding Region

5152224..5152386,5152490..5152687,5152815..5153014,5153110..5153223,5153414..5153550
,5153688..5153798,5156092..5156344,5157954..5158052,5158449..5158739

Expression

GEO Profiles:Os02g0192500

Genome Context

<gbrowseImage1> name=NC_008395:5151783..5158882 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5151783..5158882 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtgaacggcggcggggcggcggggctgccggaggcgtggtcgcaggtgagggcgccggtgatcgtgccgctgctgaggctggcggtggcggtgtgcctgaccatgtcggtgctgctgttcctggagaggatgtacatggcggtggtcatctccggcgtcaagatcctgcgccgccgccccgaccgccgctaccgctgcgaccccatccccgacgacgaccccgagctcggcacctccgccttccccgtcgtcctcatccagatccccatgttcaacgagcgcgaggtgtaccagctgtcgatcggggcggtgtgcgggctatcgtggccgtcggatcggctggtggtgcaggtgctcgacgactccactgaccccgtcatcaaggagatggtgaggatagagtgtgagaggtgggcccacaagggggtgaacataacgtaccagatccgggagaaccgcaaggggtacaaggctggtgcactcaaggaggggatgaagcatggctacgtccgcgaatgcgagtacgtggccatcttcgacgccgacttccagccggaccctgatttcctccgccgcaccatccccttcctcgtccacaactccgacatcgccctcgtccaggcccgctggcgtttcgtgaatgcagatgagtgcttgatgacaaggatgcaggagatgtccttggattaccacttcacagtggagcaggaagtgagctcctctgtctgcgcattcttcggcttcaatggaactgctggtgtgtggcgcgtttccgcggtaaacgaggcgggaggatggaaggaccggaccacagtggaggacatggatctggcaatcagggcgagtcttaagggatggaagtttgtctaccttggagatgttcaggtcaaaagtgagctgccaagtactttcaaagcctttcggtttcagcagcacaggtggtcatgtgggccggcaaacctgttcaggaagatgctgatggagattgtgagaaataagaaagtgacaatctggaagaagattcatgtcatctacaacttctttttgatccgcaaaatcatcgcgcacatcgtgacctttgcgttctactgcttgattatcccggcaactatctttgtccctgaggtcaggataccaaagtggggctgtgtgtacattcccacaatcatcacccttctcaattccgttggaactcccaggtcttttcacttgcttttcttctggatcctctttgagaatgtcatgtcactgcatagaacaaaggccactctcatcggcctgttagaagccggtagggcgaacgaatgggtcgtcaccgagaagctcggcaacgctctgaagatgaaatcatcaagcaaatcatcagccaagaaatcgttcatgagggtatgggacaggctaaacgtcacggagctcggcgtggcggcattcctcttctcctgtggatggtatgatcttgcattcgggaaggaccatttcttcatctacctcttcttccaaggcgcggcgttcttcatcgtcggtatcggatacgttggcacaattgttcctcaatcataa</cdnaseq>

Protein Sequence

<aaseq>MEVNGGGAAGLPEAWSQVRAPVIVPLLRLAVAVCLTMSVLLFLE RMYMAVVISGVKILRRRPDRRYRCDPIPDDDPELGTSAFPVVLIQIPMFNEREVYQLS IGAVCGLSWPSDRLVVQVLDDSTDPVIKEMVRIECERWAHKGVNITYQIRENRKGYKA GALKEGMKHGYVRECEYVAIFDADFQPDPDFLRRTIPFLVHNSDIALVQARWRFVNAD ECLMTRMQEMSLDYHFTVEQEVSSSVCAFFGFNGTAGVWRVSAVNEAGGWKDRTTVED MDLAIRASLKGWKFVYLGDVQVKSELPSTFKAFRFQQHRWSCGPANLFRKMLMEIVRN KKVTIWKKIHVIYNFFLIRKIIAHIVTFAFYCLIIPATIFVPEVRIPKWGCVYIPTII TLLNSVGTPRSFHLLFFWILFENVMSLHRTKATLIGLLEAGRANEWVVTEKLGNALKM KSSSKSSAKKSFMRVWDRLNVTELGVAAFLFSCGWYDLAFGKDHFFIYLFFQGAAFFI VGIGYVGTIVPQS</aaseq>

Gene Sequence

<dnaseqindica>6497..6659#6196..6393#5869..6068#5660..5773#5333..5469#5085..5195#2539..2791#831..929#144..434#ccccgctctctcccacgctctcccaccactccactctccaatcccattaattgcgcctcctccgctcgctcctccgcctcgtctcgtcgtcgtcggcgccggcgcggagagggagggagaccgacgagcggcggcgaggaggaatggaggtgaacggcggcggggcggcggggctgccggaggcgtggtcgcaggtgagggcgccggtgatcgtgccgctgctgaggctggcggtggcggtgtgcctgaccatgtcggtgctgctgttcctggagaggatgtacatggcggtggtcatctccggcgtcaagatcctgcgccgccgccccgaccgccgctaccgctgcgaccccatccccgacgacgaccccgagctcggcacctccgccttccccgtcgtcctcatccagatccccatgttcaacgagcgcgaggtaccctctccctcccgccgccattgccgccaccttcccttgcttgctttgctttctctctctctttttttttgagttcttttgcttcgagatgtggaggggtttacttactcacgatgagattatacggaattattattcattattattattatactttttggtttacttactcatgatagttattaaattatatatatttttgttttacttactcacgatggaattataatgattatattttagtgtttttcggtttacttactcattctgatttacttactcttcataagtattaattattttttggtttacttactcacgatgggaatattgtaatcgtggtaatattaatcagttaattactgtgtgttgtgtacgtgttggggggtgtaggtgtaccagctgtcgatcggggcggtgtgcgggctatcgtggccgtcggatcggctggtggtgcaggtgctcgacgactccactgaccccgtcatcaaggtacgtactaaaaacacactcctcctaataattcactcctctgtaattaaattactaatctactcctgtcctactatacacttaattactgaaaggcctagcctacatagcagcagcgtaattaatctcaaccccatcgccatgtgtacctgtcggtgaggaagactgaagaaaaagaaaaaaaaaaacctcttgctgtcggtgagtgagagtcaaatcgtcaatggagtgaggctgtctctttttgctcttttggtgaaaaggaagggaggaagggcaaaaaaaagccgtgaagctggggcactctgccgctgtagcctccgaccaactttctctctttcctcctctcgccacgctaccattacagttggtatgcaagcgaaccgaacccggcaatctacttatacgataaataagtggtaacctatgaatttttacatcatgattggatttaccacacctagagatataagtagtttgacctataaatctatttataagttaaattagtaggcaacctacgagtaattttgcctataaacaggttcatgggttagcccgcttgccgtccctacatcacagtacggacgccacagtacagtgtgtggctagctgctagtagctctcacactcttcatcactgctttagcttgagaatttgggtggaagctgtggccataggattcgattcgtcaggggggtggatggatcactgcatatgaaggatttttgggggcgttttttggttctttattctgtggattttagtggggggcgtattgtctttatttgtgctggtttttagtgcaaaatggcgggaactctgcgagtttgttatttccaaaatggtttaaatatgaagccggcatgttttttaggtttatttggaatatgtggattttttttggggtgtgaattctcattttcagctaggcctttatattgtgtatagatggccggaagagcaagaaaagtaggtttacttcaggggaggataaacagtacactagctatggcatttttttaaccgaaaaattaaagattatctcttactgaatcctgacagcagaagaatcatgtcactaggcagtagtttactcctgcctgtcattactgctaatcacttgccatcaccgggatcaatgggtaagcggcgtgcaggccacgttgtacactgaaacggccatgttatcgctggctattttcccagtactagcactagataggtgtagtagtagtagtagtagtagtacaattgggtaacagtgtgcataagtatgtgctgttactgtcgataaacaagacaagatacttggcctagaagagctatattaaacaacttgtgtcaattagtactataagctaagctaggatagccatcatcatcagcttatttctaggttggcccatgcatgctagtaatttgtccatttggtcccatgcagaagctgcaattggcttgcaacttaccatgtatcattctcatgttaagccaagcagtaataagtactaaattcaccttgttgttaatatcatattgatgtgattaaattgttgttgggtggagatcagtatgtggctgacaagtggggccattttctttttgcaggagatggtgaggatagagtgtgagaggtgggcccacaagggggtgaacataacgtaccagatccgggagaaccgcaaggggtacaaggctggtgcactcaaggaggggatgaagcatggctacgtccgcgaatgcgagtacgtggccatcttcgacgccgacttccagccggaccctgatttcctccgccgcaccatccccttcctcgtccacaactccgacatcgccctcgtccaggcccgctggcgtttcggtaagtatagtataatcgatatctatcccgactctacatgtcatccccctatatctcgtgttgactagacatttgcgtgtggtgtcggttggtgagtgattgggggtaaataagggatctcatattccgcgaattttatatagtcggaatattgtccagttgatctgggccatttatgggtgatctaatggctgggccgtgcgatcgagttgttggttgggcgagtgagagtgagtgtcacttactgacggggcatgtgcagggtacgttgcacatttctgacagctactagagtatataagcttaagatcctcgtgcccttgtctcatactagcattgtactggcaactaccagcatcttgctagatcttctcatcaatcgtatcgagccggatctctcaatccgatcatgatgattatcaactacctcattcgttcaaaaatatggttattaggatctcatcgtttggcttattcatgccaaacgaaatatttgaaaacgaaaaataatttataaataaattttttatatacatatttttagcgataaaaaagcaaatgctgaaaaataaactttgacgaaaaaactccgaaatcaactacaaatttaagattaaaaattgaaattaactaataaacataagcataaacgaaatgatgtgaccgatagatttaggtgatgttaaatccaatactaaataattatattttaagatggaatatatgcgcgtgtcgccgacgatcgccggcggtgctggctccaccggctgggccaggggtgttgctatcgccgtcggtgatcacggcggcatggagggtcgtcggtgattgcgtctggcaattatgcgtcccatttcttccgggatgcaaattgtgttcacatattattttttagggtttagttggtacttgttggtagggtatgtggcagtgtggacttcattaagtaaagatgatggagaagatccacgtgcctcgtacttctatgacgactcgcgatagcccgaccgacagttagtaagagctgaactttggtcatatgacctaaaatatcattttttatttataataaattaaaatccgatctctatatctaacatgattgtacaaggtcagacctaaattaacaattggtttataaaatataaaatattataggattatggtcttataaacgttttctcactatatgattcatcaaattgtctggtgctattcgtttaaaaaaaagatatcagttggttcatataaacaccttcttctatttggttcctataaaatcctctaaagtaagcatagttaacaaggtaaaggcaaagatcttcttcacttaattagaactaattatatttccattagcattgatccaatcgctagcacaaacacgagtacacaaggaaagtaaagtacaagccccattccttccttggcttccatgcagtagaggagctgtgcgtcccagggcggctacgtcagcacagcagcagcttgtcctgacactgaagctgagctgagctgagctgacccatctcgctgcagtcactgtgacgtggggcccacccgtgctgccactgccgccaccatgtggcgtgtacgtgacgggtgggcccatctcgtcggtgatccttgagccctaggtccggccatgtcctgctgtcaaatgctgcagcgattagtgtagtaattaattaggggccgtgccctctgaagctccagcttaattggtccttctctccaacagtggtgtgatcaagttgcaattattatcaaagcatagcagtacagtgacagtggcatgtgagatctccagagttttggcacgagcagaaattgtgctgcgatgtgcattggatcctgcagctaaattcagagattagtgtggagtagtttgggtccaattgattattagtattggccactgcccaaggttactgtttagtagtagtggtagtagtactagtcttaatacagtagtagtagaagaaacaggacaaaacctgccaaaaataaagaaacaagcaaataaataattactacagaggacagtgcagtgcaggcatccacagttgcacaatttcttcacaacagtgtagcagtagtaaaatgtttgctactagtctggttagctgagaactgtttccaggtctctttgttttaatgatgtatatagtacagttgttacctgtcaagtatttctcatggagctatgatgttgatcttgtctttgaactatatgatgttgacattgtctttgaactacaatgatattgatactgtcttttgtttctaccagtgaatgcagatgagtgcttgatgacaaggatgcaggagatgtccttggattaccacttcacagtggagcaggaagtgagctcctctgtctgcgcattcttcggcttcaatggtaagcttcaaccttcagtaatttcatctgttcttcaccaagaactttgtctctgaagattctaggatatagaatatgcattctatgttatgatttttatacataagggctgattgattcggtgaattttcaatcaggaactgctggtgtgtggcgcgtttccgcggtaaacgaggcgggaggatggaaggaccggaccacagtggaggacatggatctggcaatcagggcgagtcttaagggatggaagtttgtctaccttggagatgttcaggtacacaccaatcatggatatcctacacatgatcagcttgagatagcatccaatgcatcctttgtcattgctcttgctaagttgctattgcatttcccttctttttctttttcttgaggaaatagtacattgattcatgttgcctaagagagaaaaaaaatgagtttaacaagaattgcgtcgttttcaggtcaaaagtgagctgccaagtactttcaaagcctttcggtttcagcagcacaggtggtcatgtgggccggcaaacctgttcaggaagatgctgatggagattgtgagaaataaggtctccccaaacatagtgccaagaaatccagaaaaatttaagccatgcagcttcttgggttggcatctaacatgctattattgacattgttgcagaaagtgacaatctggaagaagattcatgtcatctacaacttctttttgatccgcaaaatcatcgcgcacatcgtgacctttgcgttctactgcttgattatcccggcaactatctttgtccctgaggtcaggataccaaagtggggctgtgtgtacattcccacaatcatcacccttctcaattccgttggaactcccaggtaagattttcttttgattttattataatcctagttgaatatgatcaacagtaatgctcctttggtgaatcaacagttcatgattgattgcatgtttagttaacccaaggaattgaactgtttgcaggtcttttcacttgcttttcttctggatcctctttgagaatgtcatgtcactgcatagaacaaaggccactctcatcggcctgttagaagccggtagggcgaacgaatgggtcgtcaccgagaagctcggcaacgctctgaagatgaaatcatcaagcaaatcatcagccaagaaatcgttcatgagggtatgggacaggtaagaaaaattgatcagaacaaaaactctgccaaatctttataactgttttctcagctcatgattcactgatttcgagtgacaatttcttcccttttttcaggctaaacgtcacggagctcggcgtggcggcattcctcttctcctgtggatggtatgatcttgcattcgggaaggaccatttcttcatctacctcttcttccaaggcgcggcgttcttcatcgtcggtatcggatacgttggcacaattgttcctcaatcataacagaagagaagcaaatatatatattttcgagatcggccgccttcaaattcaccatgtcttcagcaagagtctagtagttatataaatcagtttgaagtaaagatcatgcagcatttttttactctcatttttctctgtttcttttcttttctttttcttttcttctttgcctttttctctgttatgtgctattgtaaaaaatagtgcagtgtaaggtcactgcaggaagaaaaaactagggcaattggtgtgatctgggcaaggaggaggtgaggaggatatcgtgatgtgtttttgcttgtagcaaagtacgtgagtggtatgcttaaagaggagcaggatgactctgcttccgttgtactgtaataacatacagaaaaaaaaaaggtcagacaagtgctggacaaaaccaaaatgttcagccttctctcgcattccact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0192500, RefSeq:Os02g0192500