Os02g0193600

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Revision as of 02:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0193600| Description = Mad3/BUB1 homology region 1 domain containing protein| Version = NM_001052706.1 GI:115444782 GeneID:4328593| Length ...")
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Gene Name

Os02g0193600

Description

Mad3/BUB1 homology region 1 domain containing protein

Version

NM_001052706.1 GI:115444782 GeneID:4328593

Length

3129 bp

Definition

Oryza sativa Japonica Group Os02g0193600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5209231..5212359

Sequence Coding Region

5209313..5209557,5209690..5209749,5209894..5210038,5210149..5210306,5210990..5211071
,5211154..5211220,5211302..5211347,5211441..5211606,5211729..5211814
,5211916..5211996,5212084..5212144

Expression

GEO Profiles:Os02g0193600

Genome Context

<gbrowseImage1> name=NC_008395:5209231..5212359 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5209231..5212359 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgatggcgacgacggcggcggcggcggcggaagaggcggtggtggcgctcgacaaggagactctgatgctgatggggtgcggcgacgccccgccggctgcgccgtgcgcggagtgggagacgttcaaggagaacgtgcggccgctgaagcgcggccgcaacgtgggcctcctcaaccgcgccctcaaggcgcacgccgaccccgcccagcgcgccgccctcctcgccgcccggaggaaaatgatcgaggcaatcgacgaatacagcggcgaggatccgctccaaccatggatagactgcatcaaatgggttcaggagtcgtttccgacaggcggggattgctccgggttggtggtgatctacgagcagtgcgtgcgtgccttctggcacgacgaccgctacaagaacgatctccgctacctcaaagtgtggctggaatatgcggggaattgtgctgattccgaggtgatattcaggttcctggaggccaaccagattggtcagagccataccaattactacttgtcctatgcgtcggtaatggagtccaagaacaagctaaagaaagctaatgagatttttaaccttggtattgccaggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcagagatcatccaaaaagaaggcacatcctgaggatgacacaactactgatgatcatccagtacgcaactttgggactgtcttgaaccgtggtgaaatcagaggccagcatgcagaaaactctcacctggtgaaaactctgcaaagagttgatgtcaataggccacttgcagtttacacagatgagaattcgttacctagtcatggccttgctagaaccaggagcaacaacacggcctggcagacccttggatcacaagcagatcggaacaaagaaaataacatgaggcctgctaaatggacatcacacaagattcctcagaaggttggatcgagggcagcagttcagccgactcgtgtaagctccattgaagtcttcgtagatgacgaatgcgccgaggaaccagttccccaagtgccaaagagtacaaaaccatctattctgaagcttaggcaagcaacaagcagaaacctcaagcaggaaactgaactgcttatggagaatcctctgcggaatttccctctaaccagccttagataa</cdnaseq>

Protein Sequence

<aaseq>MAAAMATTAAAAAEEAVVALDKETLMLMGCGDAPPAAPCAEWET FKENVRPLKRGRNVGLLNRALKAHADPAQRAALLAARRKMIEAIDEYSGEDPLQPWID CIKWVQESFPTGGDCSGLVVIYEQCVRAFWHDDRYKNDLRYLKVWLEYAGNCADSEVI FRFLEANQIGQSHTNYYLSYASVMESKNKLKKANEIFNLGIARKAKPVEKLETTYRAF LQRSSKKKAHPEDDTTTDDHPVRNFGTVLNRGEIRGQHAENSHLVKTLQRVDVNRPLA VYTDENSLPSHGLARTRSNNTAWQTLGSQADRNKENNMRPAKWTSHKIPQKVGSRAAV QPTRVSSIEVFVDDECAEEPVPQVPKSTKPSILKLRQATSRNLKQETELLMENPLRNF PLTSLR</aaseq>

Gene Sequence

<dnaseqindica>83..327#460..519#664..808#919..1076#1760..1841#1924..1990#2072..2117#2211..2376#2499..2584#2686..2766#2854..2914#agctcaacggtcaaaaatctcttccaatttgaatatctctcctcccaaacggtcggctccggagcggcgcccggacgaacacatggcggcggcgatggcgacgacggcggcggcggcggcggaagaggcggtggtggcgctcgacaaggagactctgatgctgatggggtgcggcgacgccccgccggctgcgccgtgcgcggagtgggagacgttcaaggagaacgtgcggccgctgaagcgcggccgcaacgtgggcctcctcaaccgcgccctcaaggcgcacgccgaccccgcccagcgcgccgccctcctcgccgcccggaggtaccgccgccgctcccgtcacccgcgtctctcggttcttgggtttggtttgctctggatttcttgatttgggggcgggtctctggtaatcttttttttttcgtcctacgtttgattgatctactgattcaggaaaatgatcgaggcaatcgacgaatacagcggcgaggatccgctccaaccatggatagagtaagcaatttcccctttgtttcattgattcgtatactagtagtagtaggttgagccgaaagatttgccatgtcggcgatttctctgcggtttccgcaagcttgctgctcatggcatgcctttgtctgcttaatccacacgcagctgcatcaaatgggttcaggagtcgtttccgacaggcggggattgctccgggttggtggtgatctacgagcagtgcgtgcgtgccttctggcacgacgaccgctacaagaacgatctccgctacctcaaagtgtggctggaatatgtgagtttcatgaattcaggattggttctgaggtggattggttggattggattggattggtttggtttccttttgacatccagtttggcttgatcttaatctgtatgcaggcggggaattgtgctgattccgaggtgatattcaggttcctggaggccaaccagattggtcagagccataccaattactacttgtcctatgcgtcggtaatggagtccaagaacaagctaaagaaagctaatgagatttttaaccttggtattgccaggtgagaattttatgggggattggtagtttagtttcttcagatatgagaaaggttgcggattttcttcagtgctagtctgctagtagattattttttagtgataatagataagttccttctaaatttccatatagcctttgacaaagaattcctgttctagatttgaagtctgttttcttcggatttttagtcaacaaacatatagtcttacatatccccatttactgttttagttctatgaattatagtaactaaaatgcattaaactaatttggagtaagcttatgaaccgttgtagctgaaaacttttaccttctctatttgtttttggagggatatgacttttcttgccactctacctataccttaatacctaaagcatacgatttatgcatttgtttgactgcaaggtgtatagtcttccatattcccactcaccattttagctctatgtattataactaaaatgcattaaactgattgtggagtaagcttatgaactgttctagattaaaacatgtattcctgacttctctattttttgttggagggatatgatataatttctcaattttctgctctacctacaccttaatacctaaagcatactatttatgaattttgtttgatggaatggtgcatattaaaccgtaaaattctttggcttttttttttttggtcaggaaagcaaagcctgtggagaagttggaaactacatacagggcatttcttcagagatcatccaaaaagaaggcacatcctgaggtgtacataggctgatttagtaccctatttttaatctatattccactgcccactgaatgaattctattatctgttgaaacaggatgacacaactactgatgatcatccagtacgcaactttgggactgtcttgaaccgtggtgaaatcagtaagtttgctgtgatggtatgattaacatcaatttcaagtgcctggctgggtgaactaatgttgcattttgatgtggcaggaggccagcatgcagaaaactctcacctggtgaaaactctgcaaaggttattacttgttatacgcatgcaatcagtataaagaaatctagatgaacctggaatttttttactggtgttgatactgttgcaaatttgcagagttgatgtcaataggccacttgcagtttacacagatgagaattcgttacctagtcatggccttgctagaaccaggagcaacaacacggcctggcagacccttggatcacaagcagatcggaacaaagaaaataacatgaggcctgctaaatggacatcacacaaggttttttttttctcccctaagccactagaattcttcaaaaggtccctttttgcgacatgtctcgaggtttatcggttcagtaatgatcaatgaactgatgatagtattgcactgaacaacagattcctcagaaggttggatcgagggcagcagttcagccgactcgtgtaagctccattgaagtcttcgtagatgacgaatgcgccgagtatgctactgtgcccttaagttaacagttttgaatagttctttaaaaagagtaactgtaaaaacgtataatttttatataccttcctttgattatttcagggaaccagttccccaagtgccaaagagtacaaaaccatctattctgaagcttaggcaagcaacaagcagaaacctcaagcagtaagaatagttcagcttatattatgtttccagaggttctgttcctttctcatttttttttaatgtacacttgcttttttttaacagggaaactgaactgcttatggagaatcctctgcggaatttccctctaaccagccttagataatcaatatttatgtggtgtaatgctgtatttcgatcttcttttaccaatttattgtttgagtgtttgtgacattatgctgaaataagctttagcctctaaagcttaggcaggcaaagagcctttttaggctatccatgagtgttgtaatattgcacaataatttgattgataaatcctcgacgagggttgggggtgcttaatttggttggatgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0193600, RefSeq:Os02g0193600