Os02g0194000

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Revision as of 02:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0194000| Description = Myb, DNA-binding domain containing protein| Version = NM_001052709.1 GI:115444788 GeneID:4328597| Length = 3932 bp| ...")
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Gene Name

Os02g0194000

Description

Myb, DNA-binding domain containing protein

Version

NM_001052709.1 GI:115444788 GeneID:4328597

Length

3932 bp

Definition

Oryza sativa Japonica Group Os02g0194000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5238172..5242103

Sequence Coding Region

5238884..5238949,5240413..5240793,5241112..5241244,5241495..5241622,5241714..5241914

Expression

GEO Profiles:Os02g0194000

Genome Context

<gbrowseImage1> name=NC_008395:5238172..5242103 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5238172..5242103 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccagtaagctttgcaccgggtgccgcaccgtgtgcgggcttgcttatttctcttgtgagaaggcagatataagcctctgtgctagatgctatgtccgtgccaattaccggccaggtcttacttcggcagacttcaagcgaattgaaattactgaggacgcaaaatcagattggacagataaagaaactcttcaccttcttgaggccgtcctgcattatggggaagactggaaaaaggtttctcatcatgttggtagtcgatcagaaaaggactgcattgctagattcacccgattaccttttggggaacagttcatgggacccaaggaggacaaaattcagtttgggaatgattgtgatctcaatgaagaatctggatcacatatctcaaaacgactacgcctcacgccactggctgatgctagcaatccaatcatggcccaggttgcgttcttgtcagccattgttggttcagatgttgctgtagctgcagggcaagcagctatttctgcacagtcccaggttgatataagtgccagcgagactgattcttctatcaacatcagcaaggaagaagaatcttcttgcacaaatggtctttcagccaatgatttgctcaaagaggcgtctgccaacgcacaagtacaacttgaaaaggaacggaaggctatagagcagtctttatctgacatagtgggtgttcagatgaaggaaatccaggataaaatacgtcgtttcgagcagaaggagctgctgatggagaaagagaggaagcaactccactgcttgaaggaattgctcttttctgatcagctagctgttgtgcagcaccaacgcaggcccccggctgtcaccacagagagcaaggacgatgagaaaccgaagcccgttatcagcataagttga</cdnaseq>

Protein Sequence

<aaseq>MPSKLCTGCRTVCGLAYFSCEKADISLCARCYVRANYRPGLTSA DFKRIEITEDAKSDWTDKETLHLLEAVLHYGEDWKKVSHHVGSRSEKDCIARFTRLPF GEQFMGPKEDKIQFGNDCDLNEESGSHISKRLRLTPLADASNPIMAQVAFLSAIVGSD VAVAAGQAAISAQSQVDISASETDSSINISKEEESSCTNGLSANDLLKEASANAQVQL EKERKAIEQSLSDIVGVQMKEIQDKIRRFEQKELLMEKERKQLHCLKELLFSDQLAVV QHQRRPPAVTTESKDDEKPKPVISIS</aaseq>

Gene Sequence

<dnaseqindica>713..778#2242..2622#2941..3073#3324..3451#3543..3743#agctctcatggccacgccgtcgatgccagcgccggcggccgaggcggcggcggcggcgactacggcgacggcgaactccatgcctctcgctccgccgcagccgccgtcctcgggggcgccgttctcccagcccccctcgacggcaggcaccgtcaagacggaggcccctccgccgccatccacctcggcttcctcagccgcctccgccgccgcccccgcccctgccgccgccgccgccgccgccgcggccgaggagtcgccctgcaccatcaccatcccgagctattcaggtaaccccctccatcgcccccaccttgttgtgacgaggctgaactgagacctgaaaccctagcttccctcttcgccagcgtggttctcctacgactccatccacgagaccgagcgccgcctcatgccggagttcttcgaaggggaggcggcggcggcgtccgggtccaggggcccggaggcttacaagtactaccgtgacaccctcgtgaggaggttccgggcgcggccggggcggcggctgacgctcaccgaggccaggcgtgggctcgtcggagatgtcggctccgtgcgtcgcgtgttcgacttccttgaggaatgggggctgataaactatggagcttcgccgtcgggagcgaagcaggggagagataagaaagaggaggcagcgttatcgcagtcctctttgccgattggggcaacaatgcccagtaagctttgcaccgggtgccgcaccgtgtgcgggcttgcttatttctcttgtgagaaggtgagtgatttgctcttgttttgatttgcggatgagttatttatgcagtgctgtgtacagttgtattacaagtttgtcaatgtgtatgcatcgtttaccactgtagaattatcttagctgtttttcacgaattatttctgataagctatgacagcgcttggctgttgatacgggaagtggtaaatattttttcgaatggaaaaaaaaaagaggataccaaggcagaacttggtatctaattagtagaaaagaaagaagcagcaaaaaccttggtatctaattagtagaaaagaaagaaacaccaaagttaagcttaagagtatttgaacttgggtggtgggagcatccaagcctcccacctactgcgcagtgttgtaaatattcagatgtttagtttcttatggaatggaacaaagggtctcttcttttgcagttatgagtttacgcatttgtaaacaaatatatttggtgggtgtggagatgttttcggctgcaatgatttggtttagctagttttggcatgtcccgtaggaagggcaggacagatgagcagacaaagttgttgacaaatagtctgatatatactttgttttggtaactattgtgtttagtttcttatgaaattataaattgagagggtaatcaaacatgtgtgctgcaaatttctacacaaattgaggtctttaggtttgtaaaactcatggtttcaattagacagtaagagtgcaaatatttccagattgcacttattcagttcagagcttgcccttcttaccggaacaacagtccatttggctttacctatgttttgttgaaactccatgatgtggtttgggtattgagaaaaggggatatctgcggctctgagcagttgttcttgaaaccaacaatagtcttgttccctgtgaaaggcagttctgggtatccgtgttcttgcaacctttgttattttgtttggtattttcttaggcaccttcctagcaaagtttaccagaggcaataaattccaactatatggattgactgcctaacagagcatgttagataatactagcaaccaacttatctctttgccttctttcttgtggccaaggacaatcaagcacaactttgctgcttgctgcggtgatctagcatgcaagcgccagtctctcacaaaagcgtgcacgacagctcatttgtccattgcttgttaaggaggtggccagtaactcattttgaacaagtatactctttgcagtcgtgttttaccaattaccattaagaaaagtatttgcaaacgattataataacttagtgacacttttaagtctgggaagttcattgctagtcacgcaaactttatacgtcagttgagatactgtcgtcatatatcatcctggtgtattttgaaagtctcattaattccttgtatcttttaattggaaacactactaaactccttaaattctgcttatgaccaggcagatataagcctctgtgctagatgctatgtccgtgccaattaccggccaggtcttacttcggcagacttcaagcgaattgaaattactgaggacgcaaaatcagattggacagataaagaaactcttcaccttcttgaggccgtcctgcattatggggaagactggaaaaaggtttctcatcatgttggtagtcgatcagaaaaggactgcattgctagattcacccgattaccttttggggaacagttcatgggacccaaggaggacaaaattcagtttgggaatgattgtgatctcaatgaagaatctggatcacatatctcaaaacgactacgcctcacgccactggctgatgctagcaatccaatcatggcccaggtctgtatcagtaattatccatttgaagttaattgttgttatatcttgacttcttgattatgcgatacacttgtagcttatacttggaacaaagactgcaacgtgcaagcttgcaaccatagttgccaagaaaactatatttgtaaattctaactgagagacgtgacatctattatctaagaatgtcacttcggctggaacatcacagttaatcctatattcaagtcaatagttgctatgtgcttttcttatgtagcaggtttttgaatatgggtaacaattgatgcggcaaactgactaatagcattgttttcccaggttgcgttcttgtcagccattgttggttcagatgttgctgtagctgcagggcaagcagctatttctgcacagtcccaggttgatataagtgccagcgagactgattcttctatcaacatcagcaaggaagaaggtaccagctctgctctctaatacatgtgcttggcacttacttagactgcttctgtgattccatcacattgattgttgtatacttgtattattggcaaaacatatgctggtgtgcacataactgttcagatatcaatgattagtgagtgttgtaacagcttcagggtgcaaataatgcgcgagagaaaatgatgtgcaaatacctgcaatattttgaaaagatcttttcactaaattagtgtcttgtacagaatcttcttgcacaaatggtctttcagccaatgatttgctcaaagaggcgtctgccaacgcacaagtacaacttgaaaaggaacggaaggctatagagcagtctttatctgacatagtgggtgttcaggtagggcgccacgaaaattcctgagataaccacattgaatttcgaggcttatattgacttcttgatatctcctgtttaaaattattttcagatgaaggaaatccaggataaaatacgtcgtttcgagcagaaggagctgctgatggagaaagagaggaagcaactccactgcttgaaggaattgctcttttctgatcagctagctgttgtgcagcaccaacgcaggcccccggctgtcaccacagagagcaaggacgatgagaaaccgaagcccgttatcagcataagttgattctagccgagcttcgtcaattgacatggcattagtatgatacaatgcaatcctgtgatgtagcccgactttttgacagctttaggtagtagaatattcaaaaactgtgattagctgtagtatgattgtatgaatggtgtttgattaaactctttgcagtccagctaatgaaatggtgtgttcttgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0194000, RefSeq:Os02g0194000