Os02g0196600

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Revision as of 02:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0196600| Description = ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein| Version = NM_001052728.1 GI:115444826 GeneID:432...")
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Gene Name

Os02g0196600

Description

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein

Version

NM_001052728.1 GI:115444826 GeneID:4328616

Length

5904 bp

Definition

Oryza sativa Japonica Group Os02g0196600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5404703..5410606

Sequence Coding Region

5405550..5405810,5406654..5407399,5407575..5408046,5408129..5408296,5408802..5409056
,5409165..5409287,5409395..5409880,5409976..5410401

Expression

GEO Profiles:Os02g0196600

Genome Context

<gbrowseImage1> name=NC_008395:5404703..5410606 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5404703..5410606 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagaatggagagaaccatctcaaagatccacttcttcaggcagatggaggcggctccggtgcttctcccgccggggcgtcgccgcggaaggagaggaagacgaggaaggtcatgttcaatgtccgggggatctcgtgtgcttcgtgcgccgtgtcgatagagacggtggtggctggcctcaagggagtcgagagcgtctcggtttcgccgcttcagggccaagctgttgtccagtacagaccagaggaagccgatgcaagaaccataaaagaagctatcgaaggcctcaatttcgaggtcgatgaacttcaagaacaggaaattgctgtatgcagactccagataaaaggaatggcatgtacaagctgctcggaatctgtggagcgagcacttcagatggtacctggagtgaagaaagctgcagtgggacttgccctagaggaagctaaagtccattttgatccaaatatcacaagtcgtgatcttataattgaggctattgaagatgctggatttggagctgatctcattagttccggggatgatgtgaacaaagtccacctaaaactagagggtgtgagttccccagaagacatcaaactcattcagtcaagactggaatctgtcgaaggtgtgaataacgtggaatgtgacacagcgggacagacaataatagttgcatatgatcctgatgtcactggcccacgattacttattcagtgcattcaggatgctgcacagccccctaaatacttcaatgctagcttgtattcaccaccaaagcaaagagaggcagagcgccatcatgaaattaggaattacaggaatcaatttctttggagttgcctgttttctgtgcctgtattcatgttctccatggttctgccaatgatttctccttttggggattggctgttttacaaagtatgcaataacatgacgataggtatgctattacggtggttgctgtgttctccagttcagttcattattggttggagattttatgttggagcttatcatgcgctaaaacgaggatactcgaacatggacgtgcttgttgctttggggacaaatgctgcatacttctattctgtgtatatagttctgaaggcactaacatcagagtcatttgaaggacaggatttcttcgaaactagtgctatgttgatatcttttatattgctggggaaatatctggaggtggtggccaaaggaaagacatcagatgctttgtcgaagttgactgaacttgcaccagaaacagcttgtcttcttactttggacaaagatggaaatgccatttcagaaacggagatcagcactcagttacttcagagaaatgatgtcattaagattgtccctggggaaaaagtccctgttgatggtgttgtcatcaaaggccaaagtcatgtgaatgaaagtatgataactggtgaagcaaggcccattgcaaagaaaccaggagacaaggttattggtggtactgtaaatgacaatggttgtataattgttaaggtcactcatgttgggtcagaaacagctttgtcacagatagttcagttagttgaagctgctcaacttgcaagggctccagttcagaagttggcagataggatttcacggttttttgtcccaacggttgtggtggctgcatttcttacatggcttggctggttcgtagctgggcaattcgacatataccctcgagaatggattccaaaggcaatggatagctttgagcttgctctgcagtttggaatatctgttcttgttgttgcatgcccgtgtgctcttggactggctaccccgactgctgttatggttgccactggaaaaggtgcttctcaaggtgttcttattaagggtggcaatgcacttgagaaagctcacaaggttaaagctatcatatttgataaaactggaacgctgactgtcggtaaaccttctgttgttcaaacaaaggtgttctccaagataccgctactagagctgtgtgatttggctgctggtgcagaggcgaacagtgagcatcctctatcaaaggctattgtagagtacacaaagaagctcagggaacaatatggatctcacagtgaccatataatggagtccaaggactttgaggtgcatccaggggcaggggtgagtgccaatgttgaaggcaagctggtgctggttggaaacaaaaggcttatgcaagaatttgaagttccaataagttctgaagtagagggacacatgtctgaaacagaagagcttgctaggacctgtgtgcttgttgctatcgacagaaccatctgcggagctctttctgtgtcagatcctctgaaacctgaggcaggccgtgccatttcatacctcagctcaatgggtatctcgagtatcatggtgacgggcgacaattgggctacagctaaatccatagctaaagaggtcgggatcggcacagtatttgccgagatcgatccagttggtaaagccgaaaagatcaaggacttgcagatgaaagggttgacggtggccatggtcggcgacgggataaacgactcgccggctctagccgctgcagacgtaggcctggcgattggggctggaaccgacgtcgccatcgaagctgccgacattgtcctgatgaggagcagcctcgaggatgtgatcactgccatcgatctctccaggaagaccctctcaagaatccggctcaactacgtctgggctctgggctacaacgtcctgggcatgccggtcgccgcgggcgtcctgttcccgttcaccggcatccggctgccgccatggctcgccggagcttgcatggcggcctcgtcggtgagcgtcgtctgctcgtcgctgctgctccagctctacaagaagccattgcacgtcgaggaggtggctgctggacccaagaatgacccggatttggtgtga</cdnaseq>

Protein Sequence

<aaseq>MEQNGENHLKDPLLQADGGGSGASPAGASPRKERKTRKVMFNVR GISCASCAVSIETVVAGLKGVESVSVSPLQGQAVVQYRPEEADARTIKEAIEGLNFEV DELQEQEIAVCRLQIKGMACTSCSESVERALQMVPGVKKAAVGLALEEAKVHFDPNIT SRDLIIEAIEDAGFGADLISSGDDVNKVHLKLEGVSSPEDIKLIQSRLESVEGVNNVE CDTAGQTIIVAYDPDVTGPRLLIQCIQDAAQPPKYFNASLYSPPKQREAERHHEIRNY RNQFLWSCLFSVPVFMFSMVLPMISPFGDWLFYKVCNNMTIGMLLRWLLCSPVQFIIG WRFYVGAYHALKRGYSNMDVLVALGTNAAYFYSVYIVLKALTSESFEGQDFFETSAML ISFILLGKYLEVVAKGKTSDALSKLTELAPETACLLTLDKDGNAISETEISTQLLQRN DVIKIVPGEKVPVDGVVIKGQSHVNESMITGEARPIAKKPGDKVIGGTVNDNGCIIVK VTHVGSETALSQIVQLVEAAQLARAPVQKLADRISRFFVPTVVVAAFLTWLGWFVAGQ FDIYPREWIPKAMDSFELALQFGISVLVVACPCALGLATPTAVMVATGKGASQGVLIK GGNALEKAHKVKAIIFDKTGTLTVGKPSVVQTKVFSKIPLLELCDLAAGAEANSEHPL SKAIVEYTKKLREQYGSHSDHIMESKDFEVHPGAGVSANVEGKLVLVGNKRLMQEFEV PISSEVEGHMSETEELARTCVLVAIDRTICGALSVSDPLKPEAGRAISYLSSMGISSI MVTGDNWATAKSIAKEVGIGTVFAEIDPVGKAEKIKDLQMKGLTVAMVGDGINDSPAL AAADVGLAIGAGTDVAIEAADIVLMRSSLEDVITAIDLSRKTLSRIRLNYVWALGYNV LGMPVAAGVLFPFTGIRLPPWLAGACMAASSVSVVCSSLLLQLYKKPLHVEEVAAGPK NDPDLV</aaseq>

Gene Sequence

<dnaseqindica>848..1108#1952..2697#2873..3344#3427..3594#4100..4354#4463..4585#4693..5178#5274..5699#accaaatataaatcaaatcccaacgtgacctcccccgcggccgcggcctgcttcacgcctccctcctcctcgccgcctcgccgcctcgcctcgcctcgcctcgcctccaccgcctctactaaaccctccgccgccgccgccgccgcggtgatcaccggcggccgaggtaagccgccgctctgacgctccctcttgacggacggcgcgtttggtctcgccgcctttggcgttccgtgtttttatcttcgcccggattccggatggattttgattttgattttttttttgtttctgtttcccccaaatacccggggccttgtttgggttcgtggagataaacgcgtagtaggcggagttgctgcgggcgccgcctcttttttttcttgttcctcttttgtcaaatggacagttcgttggttgtcgttggcgcggtggagttggatttgtgggatttttttttctcgggcttaatgcaagtggtggttaaacaatttgcttcaacgctatcactgaacttagaatgtaccaaaaagatccaaacagtttgatttaatgttattttactaacaatttgggggggaggctgcacctgttagtgcttaccaggactatacttttggggatttttaaggagtttacatctgtactgagttcataattatctgtactgagttcataattatctgtaccgagttcataattcatagttcaagttgtacttgcagtacagaagtttgtgctggattatgagaagctattattatatcttaccaattggctgtaaaatatagcatggacatatgaccatctaaatttatgttggtttttggttgttcctgggacagggatggagcagaatggagagaaccatctcaaagatccacttcttcaggcagatggaggcggctccggtgcttctcccgccggggcgtcgccgcggaaggagaggaagacgaggaaggtcatgttcaatgtccgggggatctcgtgtgcttcgtgcgccgtgtcgatagagacggtggtggctggcctcaagggagtcgagagcgtctcggtttcgccgcttcagggccaagctgttgtccagtacagaccagaggaagccgatgtaagattgccttgagctgacggtcttgttctcaactgcactagatttccccagcatgggagggacaattttgggtgtttctcatcatggggcaaaataggatttaggattcaatgcatatctatattgtccttattcaagttattgtgggccagttctctatttgactaggagtatatgtctgcaactctgcatgaatttaattccagcaatatggtggttttgaattccaggagctgaattttatcctgtagatgtcatgatttaggtaattaggatacatgaaaattttgatttcagctttatattggtcattcatataaggtccacgagtaagtactacgaaccagtgactatcttaacaatcttttttgtcagcgtgggccaaacccttgacaatgactgtgcaatcatatgatgacctttatacctcatcgagttcatgttctccaggcctggaatattgaattacttcgcaatcatatgatcttttttacctcttactcagaaatttttactagcagtttggttcgaatcagtatttatcaaggttctaaaaattggtaactggtacttgacagttagtgaccatatagcctgtgatgtcaagttcaggctcatgtagtctcatgttctttgtatacagttgccatcatgcaattgccagttaggctgtatagtcactaatgagtgcaccaactggtaacttttgtctgcatggacatgctttcagttcactaaactcatgtatatttcaagttgcactcatgaagtaatgacaggatattttacggtttggcattattttccatctgttctcagtttggattcttattcttccaggcaagaaccataaaagaagctatcgaaggcctcaatttcgaggtcgatgaacttcaagaacaggaaattgctgtatgcagactccagataaaaggaatggcatgtacaagctgctcggaatctgtggagcgagcacttcagatggtacctggagtgaagaaagctgcagtgggacttgccctagaggaagctaaagtccattttgatccaaatatcacaagtcgtgatcttataattgaggctattgaagatgctggatttggagctgatctcattagttccggggatgatgtgaacaaagtccacctaaaactagagggtgtgagttccccagaagacatcaaactcattcagtcaagactggaatctgtcgaaggtgtgaataacgtggaatgtgacacagcgggacagacaataatagttgcatatgatcctgatgtcactggcccacgattacttattcagtgcattcaggatgctgcacagccccctaaatacttcaatgctagcttgtattcaccaccaaagcaaagagaggcagagcgccatcatgaaattaggaattacaggaatcaatttctttggagttgcctgttttctgtgcctgtattcatgttctccatggttctgccaatgatttctccttttggggattggctgttttacaaagtatgcaataacatgacgataggtatgctattacggtggttgctgtgttctccagttcagttcattattggttggaggtacaatcccatctctcgaacagcttcttcttgatgttgtttcatgttccttatctcaagtcttttgtttattgtatttagcctaaatataatgttgccttcgtttgtttccttcattgcacacatgcactataaatcatgtgtggttattcactatgtgttattttactgacagattttatgttggagcttatcatgcgctaaaacgaggatactcgaacatggacgtgcttgttgctttggggacaaatgctgcatacttctattctgtgtatatagttctgaaggcactaacatcagagtcatttgaaggacaggatttcttcgaaactagtgctatgttgatatcttttatattgctggggaaatatctggaggtggtggccaaaggaaagacatcagatgctttgtcgaagttgactgaacttgcaccagaaacagcttgtcttcttactttggacaaagatggaaatgccatttcagaaacggagatcagcactcagttacttcagagaaatgatgtcattaagattgtccctggggaaaaagtccctgttgatggtgttgtcatcaaaggccaaagtcatgtgaatgaaagtatgataactggtgaagcaaggcccattgcaaagaaaccaggagacaaggttggtattttttggatcctgattgtatttgctcttgttatgaactagtatcctgatggttcaattgacttgtttttaacaggttattggtggtactgtaaatgacaatggttgtataattgttaaggtcactcatgttgggtcagaaacagctttgtcacagatagttcagttagttgaagctgctcaacttgcaagggctccagttcagaagttggcagataggatttcacggttttttgtcccaacggtaggttcgcttgttttctcctgcaaattcccttcgtgctatttcccaccagcgtttacaaaattgcaacattgctatattctacctgcctagctactggttaataacaactggctacggaggtaatcgaggtatttatcctagacagtagacacatagtcaactgcactggaaactttacctgtactggtcactagttatcgcactaataatttcttggtatttctaccctagacttagtcagcattcatctggaaactttcttgaacctaccccagcttctactgtagaatcgtagagcaaattatattcaatttagtggagtagcagttttaactctactccttaccaagttcacctcctctgtaaacagctggttacttatgagaaatgttaccctgattgatacttgcaaatgtttcctaactacttttgatgcttctcatgcatactttctgtgagatcgtctctttcttcatctcatattggtccctctcattttaaggttgtggtggctgcatttcttacatggcttggctggttcgtagctgggcaattcgacatataccctcgagaatggattccaaaggcaatggatagctttgagcttgctctgcagtttggaatatctgttcttgttgttgcatgcccgtgtgctcttggactggctaccccgactgctgttatggttgccactggaaaaggtgcttctcaaggtgttcttattaagggtggcaatgcacttgagaaagctcacaaggtaactgagatgatttctatgtcatgtattattttttctcacatcaaatgtattctattttttttatattgtgacactaaactattccttgtatttctttatgtgcaggttaaagctatcatatttgataaaactggaacgctgactgtcggtaaaccttctgttgttcaaacaaaggtgttctccaagataccgctactagagctgtgtgatttggctgctggtgcagaggttggcttcttagatgcaaatgctaataatttttgttgaatgtcgtgtgatgttcctagtttgctgtctcatgtcatctaaccttaacttttttctaactttgtcaggcgaacagtgagcatcctctatcaaaggctattgtagagtacacaaagaagctcagggaacaatatggatctcacagtgaccatataatggagtccaaggactttgaggtgcatccaggggcaggggtgagtgccaatgttgaaggcaagctggtgctggttggaaacaaaaggcttatgcaagaatttgaagttccaataagttctgaagtagagggacacatgtctgaaacagaagagcttgctaggacctgtgtgcttgttgctatcgacagaaccatctgcggagctctttctgtgtcagatcctctgaaacctgaggcaggccgtgccatttcatacctcagctcaatgggtatctcgagtatcatggtgacgggcgacaattgggctacagctaaatccatagctaaagaggtcgggatcggcacagtatttgccgagatcgatccagttggtaaagccgaaaagatcaaggacttgcaggtgcaatcttttctccttgcagcaaaaacaaagttggaatagatcacagattttaccaccattattccaacttacatcacatcatttgttcacagatgaaagggttgacggtggccatggtcggcgacgggataaacgactcgccggctctagccgctgcagacgtaggcctggcgattggggctggaaccgacgtcgccatcgaagctgccgacattgtcctgatgaggagcagcctcgaggatgtgatcactgccatcgatctctccaggaagaccctctcaagaatccggctcaactacgtctgggctctgggctacaacgtcctgggcatgccggtcgccgcgggcgtcctgttcccgttcaccggcatccggctgccgccatggctcgccggagcttgcatggcggcctcgtcggtgagcgtcgtctgctcgtcgctgctgctccagctctacaagaagccattgcacgtcgaggaggtggctgctggacccaagaatgacccggatttggtgtgaagactgaagaagcgtcggtcttgctgtgctgactgaaactgagcatgaagcaaacgccttgtttgcagtggccctcctgactgatttctgtacagtagtcatgttttgggattctctgtttttttttgggtacttctgattgattcaataataatttggggagcttaattgctatccagtgatatatagatgtgaaattgtgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0196600, RefSeq:Os02g0196600