Os02g0196800

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Revision as of 02:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0196800| Description = Similar to Fumarylacetoacetase (Fragment)| Version = NM_001052730.1 GI:115444830 GeneID:4328618| Length = 3644 bp| ...")
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Gene Name

Os02g0196800

Description

Similar to Fumarylacetoacetase (Fragment)

Version

NM_001052730.1 GI:115444830 GeneID:4328618

Length

3644 bp

Definition

Oryza sativa Japonica Group Os02g0196800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5415009..5418652

Sequence Coding Region

5415218..5415280,5415398..5415523,5415614..5415710,5415797..5415861,5415964..5416026
,5416127..5416197,5416430..5416489,5416564..5416663,5416863..5416938
,5417284..5417358,5417451..5417575,5417664..5417722,5418031..5418109
,5418303..5418533

Expression

GEO Profiles:Os02g0196800

Genome Context

<gbrowseImage1> name=NC_008395:5415009..5418652 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5415009..5418652 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggggtcgcggtcgccgctgaggtcgttcgtggaggtggcgccggggtcgcacttccccatccagaacctccccttcggggtcttccgccgcaggggctcgccggagccggagccgccgcgcccggccgtcgccatcggggacttcgcgctcgacctcgccgccgtctccgacgcgggcctcttccacgggcccctcctctccgcctccccctgcttccgccaggaaacgctcaacatgttcctggggatggggcgtccggcctggaaggaggcgcgcgccacgctgcagaagatcctctcagctgatgagccggttttgcgtgacaacgaggccttgaagaagaagtgccttgttcccatgagcgacacagagatgcttctgccaatcacggtaggagactacaccgacttcttttgttctgtgcaccatgcaaggaattgtgggttcatcttccgtgggccacagaccccagtcaacccaaattggtttcagcttccagtaggttatcatggtcgtgcatcctctgtgattgtatctggaacagacatcattcgacccaaagggcaaggccatccaacaggagattctcgaccttattttggtccttctaagaagcttgattttgaacttgagatggcagccattgttggaccagggaatgaattgggaaaacctatcgatattaatgatgctgaagaacatatctttggcctaatgataatgaatgattggagtgccagagatatccaagcttgggaaactatacctcttggacctttccttgggaaaagtttcagtaccacagtatcaccctggatcgttactatggatgccctaaagcctttcacctgtgaagctcctaagcaggaacctgaacctttgccttacttagctgaaaagaaccacgtaaactacgatattcctcttgaggtctggattaagcccaaggagcaaagtgaaccatcaatggttgcaaagagtaacttcaagcatctgtattggactttaacacagcaactagcacaccacactgttaatggatgcaatctgagaccaggggatatgtttgcaactggcacactaagcggacctgagacagaatctttgggatgtttgctggagctaacatggaatgggcagaaggagatatcagttggaaactcgacccgcaagttcctagaagatggggatgaggtcatcttgacagcttgttgcaagggtgaaggctacaatgtcggattcggaacctgcactgggaaggttctgcctgcacttccatga</cdnaseq>

Protein Sequence

<aaseq>MAEGSRSPLRSFVEVAPGSHFPIQNLPFGVFRRRGSPEPEPPRP AVAIGDFALDLAAVSDAGLFHGPLLSASPCFRQETLNMFLGMGRPAWKEARATLQKIL SADEPVLRDNEALKKKCLVPMSDTEMLLPITVGDYTDFFCSVHHARNCGFIFRGPQTP VNPNWFQLPVGYHGRASSVIVSGTDIIRPKGQGHPTGDSRPYFGPSKKLDFELEMAAI VGPGNELGKPIDINDAEEHIFGLMIMNDWSARDIQAWETIPLGPFLGKSFSTTVSPWI VTMDALKPFTCEAPKQEPEPLPYLAEKNHVNYDIPLEVWIKPKEQSEPSMVAKSNFKH LYWTLTQQLAHHTVNGCNLRPGDMFATGTLSGPETESLGCLLELTWNGQKEISVGNST RKFLEDGDEVILTACCKGEGYNVGFGTCTGKVLPALP</aaseq>

Gene Sequence

<dnaseqindica>3373..3435#3130..3255#2943..3039#2792..2856#2627..2689#2456..2526#2164..2223#1990..2089#1715..1790#1295..1369#1078..1202#931..989#544..622#120..350#atctgcgcctatttattgcggcctcttcttcctcctctcctcgcctcgcctcgctcttccactgttcatctgcgccacgacacgacacgacacgacacgagacgagagaggagtcggcaatggcggaggggtcgcggtcgccgctgaggtcgttcgtggaggtggcgccggggtcgcacttccccatccagaacctccccttcggggtcttccgccgcaggggctcgccggagccggagccgccgcgcccggccgtcgccatcggggacttcgcgctcgacctcgccgccgtctccgacgcgggcctcttccacgggcccctcctctccgcctccccctgcttccgccaggtccgcaccctgcctaccttacctaccttaccttacctactcgtcttgtgttgcggttgatctgctggtggtgagctaagcttagcagcaatttgcgcggcgcggagattggagatttgggtggttgattccactgtgatttttggtggttacaagtagtagtaatttttagatttgtttcgtgtgcatgcaggaaacgctcaacatgttcctggggatggggcgtccggcctggaaggaggcgcgcgccacgctgcagaagatcctctcaggtttcacactttagctgctcacttcaaattcccaatatcttgtagtagtctactatgctgttagtaatgcacgatgagtagcgcggcttctgccccccaaattctgatgctgatgagtaattctacctgtagttgtgttgttagtactatgttgtgccaatgtatcatgatgcaagaaagtatcgattaaccgcctatgttcaaaactgaaagtatcgattaaccgcctatgttcaaaactatccaagaattatgagatcctgaggtagacttacacttttttttaatgggttctctaatctttgcagctgatgagccggttttgcgtgacaacgaggccttgaagaagaagtgccttgttcccatggtgagcttgatcaactactcttttctttgttacgagaaacaggatgaccatttatgaaatcactaacttctctgtttttatcatttagagcgacacagagatgcttctgccaatcacggtaggagactacaccgacttcttttgttctgtgcaccatgcaaggaattgtgggttcatcttccgtgggccacagaccccagtcaacccaaattggtaatgtattttcttgaccatgccttgtgctgagacttgagacttgggttttgacataaacactaatctgcaatgtatgtttgcttcatcaggtttcagcttccagtaggttatcatggtcgtgcatcctctgtgattgtatctggaacagacatcattcgacccaagtacgcatcccatagattcggatagttatcaaattcctgtcagattacgagatagttttattactattgtttgaatgattgaatatattagtgttattggatagcgggtagctgtttctagttttacataacctctgaagtctgaagtgtctattttgcttaattattgctctcaatgccctctttcaaataattcactatattcgatgatgtttgctgcattcaactttttgttgcatgcagtgatgtattgtagatggatacatatgtgtagtatattacattttatttttgtcataatatccaattgatatgtcaataatgtcctctttctctgccttttagagggcaaggccatccaacaggagattctcgaccttattttggtccttctaagaagcttgattttgaacttgagatggttagtttcttacaaacctcttgactcacagtatttggtattcttgaactgttattgacatacctgttgcatgtttgttaaatttgagctgttggttgtcattgtggtataaaatctggccgtatgtaattagttatagatattttcatttcccctggatcaaatatatcataacgctttgttggcttgttgctttcaggcagccattgttggaccagggaatgaattgggaaaacctatcgatattaatgatgctgaagaacatatctttggcctaatgataatgaatgattggagtggtaggtattcttttcagttttcgttcagatcagttgcatactttggttaaactgagttttgtataatattgcagccagagatatccaagcttgggaaactatacctcttggacctttccttgggaaaagtttcagtaagacacctgatgccttttcagttatacttatgccatgttcactaatacaccactctctgttgaaaagtttcctgcacatttattgcttagtttttacaaatgctcatgatcatatttctactgtggcctcgacaattacttgagtggattcttccatgatttccgcaatggactatgcttttatctttcgtcaatgtaacatgtttccttcctactttgtgatttttaggtaccacagtatcaccctggatcgttactatggatgccctaaagcctttcacctgtgaagctcctaagcaggtgagcatgtcttagtattatagtatatagttaaccatattttccttgagaatcatcattttattgttctatggataaattaaattgctttgcgtggcaggaacctgaacctttgccttacttagctgaaaagaaccacgtaaactacgatattcctcttgaggtaggattttctcatggcatttcttcttttatatttttatattaatagatatttgattaaaacataaactgatgattattactgcatttcattttctgtaaggtctggattaagcccaaggagcaaagtgaaccatcaatggttgcaaagagtaacttcaagcatctgtaaggatgcttcctgttttccgattgccgtttcattaccatatgtatttgttagctttgtccttactgtaactattttttcccaggtattggactttaacacagcaactagcacaccacactgttaatggatgcaatctgagaccaggggatatgtttgcaactggcacactaagcggacctgtatggaataaccatttcaaatatcaccataaacataccaatctagaagttatcgtgcatgtttacaactaaacatctgccttctttcaggagacagaatctttgggatgtttgctggagctaacatggaatgggcagaaggagatatcagttggaaactcgacccgcaagttcctagaagatggggatgaggtcatcttgacagcttgttgcaaggtacagcaatctcataagtcttgatcaaaccaaatttagagctcttttcgtctaaaacaaatatctttgaagattccatgctctatcttgatgccatccatctacatgtttttacagggtgaaggctacaatgtcggattcggaacctgcactgggaaggttctgcctgcacttccatgatccaacatatagaggatagcctgctttcatctcatcagtgtgtcaataatctctgaagaaagcatgcaatgaggcaatgtatctagctagttacatctatattttagtgcttagtgatggtaaaaatactaataaggtatgcttccctgagctttacagaagggatgtaattaatgttctccagttacaataagaacttatttgaagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0196800, RefSeq:Os02g0196800