Os02g0198200

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Revision as of 02:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0198200| Description = EF-Hand type domain containing protein| Version = NM_001052740.1 GI:115444850 GeneID:4328628| Length = 3212 bp| Def...")
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Gene Name

Os02g0198200

Description

EF-Hand type domain containing protein

Version

NM_001052740.1 GI:115444850 GeneID:4328628

Length

3212 bp

Definition

Oryza sativa Japonica Group Os02g0198200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5501167..5504378

Sequence Coding Region

5502174..5502369,5502880..5503079,5503653..5503827,5503923..5504038

Expression

GEO Profiles:Os02g0198200

Genome Context

<gbrowseImage1> name=NC_008395:5501167..5504378 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5501167..5504378 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggggcatagtcgggcggggtgattctccaaggcacacttcaccagcatcaaagttagagagaaagatggttgaagccatgcagcagagagcacagaaaggaacttctgttaaatcattcaatagtgttattatgaagttcccaaaaattgacgagagtttgagaaactgcagaattatctttcagcaatttgatgaagattccaatggtgaaatagatcaacaagaacttaagcattgttttcaaaagttggatatctcattcacagatgaggagataaaagacctatttcaggcatgtgacatttatgaaaacatgggcatgaaatttaatgagttcattgtcttcctgtgccttgtttatcttctgaatgatccgcttgtgtcagaagcaagaaaaagaatgggactaggtagtcttgaaccaactttcgagacattggttgattcattcgtcttcttggacaaaaacaaagatgggtatgtcagcaagaatgagatgatacaagcgatcaacgaaaccatcggaggagaacgctcttctgggcggataggcatgaaaagatttgaggaaatggattgggacaagaatggaacggtgaccttcaaggagttcctcttcgcttttactcgttgggtggggattgatgataacgaagatgacgacgatgaggagggagtgtaa</cdnaseq>

Protein Sequence

<aaseq>MGGIVGRGDSPRHTSPASKLERKMVEAMQQRAQKGTSVKSFNSV IMKFPKIDESLRNCRIIFQQFDEDSNGEIDQQELKHCFQKLDISFTDEEIKDLFQACD IYENMGMKFNEFIVFLCLVYLLNDPLVSEARKRMGLGSLEPTFETLVDSFVFLDKNKD GYVSKNEMIQAINETIGGERSSGRIGMKRFEEMDWDKNGTVTFKEFLFAFTRWVGIDD NEDDDDEEGV</aaseq>

Gene Sequence

<dnaseqindica>1008..1203#1714..1913#2487..2661#2757..2872#ttccaacgccatttcttggttttccatccgccgatccactcgcccgatcccctgccgatccacacgcgcgaacgcgcctctctcgccgatccccctccttcgagagcttcgtctccgaggcatttcggagcattgagcggcacaggcaaaggcaatcccccgctttcttgatttttttttctttttcgtggttcatatcatcggcggtcggcattttaatctgtatgaaactggcgcgtgtgttggtgatcctgtttagaatctgtatgtaatctgcggtgggagatgtatggcttactactgacatgtttcttgatttgtttgtttggggtatttgttaaagaattgcagatttgcagtatgggctggttcaaagattctgcattattctagtcggtataaagaaatcttgttgtctgatgctgccatgcaatttggcctcttgttagggatgataaccagataagtagtctacattgttaactaggagcgaatagaaaatttgcaggcacattatcatggacaaatctggttgttgttgtgttgattgattgaatgtcatcaagcaaaaaaaggtgggtgcatactcttaattgttcgcaatgattctttgcgagaatcatgggtttgatgatgcaaccaaaccaaaaatgtaatcgtagtcctaactactgatggaatattgggagcaattaggtaggtccgtaggtagatccttgtcactaggatgtacaggtcctatatgctttttgtagcctccattgggcttatgcgcatcgtgccgcctcaagttttgtcgagtaaggtttcaggtaatgcacaaccatgattgtttccttttatgaggctggtacctattgttgtaggcggtgtgtttcgtgcccccctgcaagttcatgcatccccaaactagatagttgatcatgttcatgctctcatcacaagcgttgtttacatttgcagggaagtggcttctatcaccctacaaaattgcgttgtttgctgaaatggggggcatagtcgggcggggtgattctccaaggcacacttcaccagcatcaaagttagagagaaagatggttgaagccatgcagcagagagcacagaaaggaacttctgttaaatcattcaatagtgttattatgaagttcccaaaaattgacgagagtttgagaaactgcagaattatctttcagcaatttggtgagtgctaaccctgtatgtgtactagtgctatgatattactgatacttatttcttgcgtgctgtcaaaaggtcaaaactcgaaaggaaaactggattgaacatcgaaagcagaaactgtcctgaatattagctcatatagtgatgttctaattttgattgaattgtgtagccgtcaatagctaaatataaagatgttgaaagtttggagttgattaacttgttcgagttacttcaagaaattttcctcaacctaattaccatacagtttacatgtgatcctgtagcctggatcaactaatttatgtaactggagatgatagacctcctcaagtttttgtttccttaatttctcgatttctttgctttttctatttgtgaggattttggtttcgacctaacatcttgtgaattgtattcacttggaaatcccatcctcgatctgtgtggcatttcctttgtccccttttgttttcttgttctgacaaatatcattatgtttctctccagatgaagattccaatggtgaaatagatcaacaagaacttaagcattgttttcaaaagttggatatctcattcacagatgaggagataaaagacctatttcaggcatgtgacatttatgaaaacatgggcatgaaatttaatgagttcattgtcttcctgtgccttgtttatcttctgaatgatccgcttgtgtcagaagcagtatccttcatgcttcattatagcaagtcttcgaatttttgttatcaattcattctgctgctgcattgcatgtatataattaggaaatgtttgccgcttttttatcttctcaaaaatataattcatacatattagtaacactaacttttcccatttgatcacaaaaatcttaaaaatgcaagtagctcgttgcaaagtaagattaaggaataatacttgggtatatggtacccttgcagaagggtgatatttgtattcttgcatgcgtacattgataatctgcatgggcatttagaaagtaagtcaaaggaggctattatttaagacatttttcatgttgcaacaaattcaagacaagattttgaaacaatttcaacagaggtgctttcaaacaaagttgaagagagactcaaagtgctttcctaaaaactttcatcatagcataaacttgttagaccatacaggggcttttaaatggatattctctatataatctgcatcgaatttattccttatcatttctccgttgtgtttatttctggatacatttatacccttgacactatgctttagagaaaaagaatgggactaggtagtcttgaaccaactttcgagacattggttgattcattcgtcttcttggacaaaaacaaagatgggtatgtcagcaagaatgagatgatacaagcgatcaacgaaaccatcggaggagaacgctcttctgggcggataggcatgaaaagatttggtaagttttcttttttgtggtatcgtcacaaatctcacatgaacacagtacacactgacaatgatggtcctaatacactcttttggtggtcccagaggaaatggattgggacaagaatggaacggtgaccttcaaggagttcctcttcgcttttactcgttgggtggggattgatgataacgaagatgacgacgatgaggagggagtgtaaaatgaagatttactcatcctgaattaggccaagtcagcagccctcaggagcactcaagcagtcctcctattgtggcttggagtactcaatgataaaccggagattagttcatgttgtttatgttcttgttaatataaagattggacccaagttatttctagttgtggcgaaagtttagtggtataaagctgctttggtcatatggcatttgatccaattgatcgtagataattaaccctgtcattcaaaaaaaattgtaagcttggatgtttcagagataaaaaattgtaaagtgtgaggaagtgtcattttctttgaaattaaatgtttgttcttgtat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0198200, RefSeq:Os02g0198200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os02g0198200&oldid=21828"