Os02g0198300

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Revision as of 02:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0198300| Description = Arf GTPase activating protein family protein| Version = NM_001052741.2 GI:297598777 GeneID:4328629| Length = 3339 bp...")
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Gene Name

Os02g0198300

Description

Arf GTPase activating protein family protein

Version

NM_001052741.2 GI:297598777 GeneID:4328629

Length

3339 bp

Definition

Oryza sativa Japonica Group Os02g0198300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5505087..5508425

Sequence Coding Region

5505630..5505654,5505965..5506049,5506444..5506519,5506694..5506857,5507059..5507176
,5507283..5507399,5507543..5507638,5507905..5508186

Expression

GEO Profiles:Os02g0198300

Genome Context

<gbrowseImage1> name=NC_008395:5505087..5508425 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5505087..5508425 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtggaagacgtgatgattcagctaagatggcaaaactgaaggagctattgcacagaagtgaaaaccgtatctgtgctgactgcagcgcgcctgaccccaaatgggcatcagctaatataggagtattcatatgcctcaagtgttccggtgttcacagaagtcttggcacacacatttcaaaggttctgtcagtcacactagatcagtggagtgacaatgaaattgataacgtgatcgaagtcggtggaaattctcacgccaatgctatatatgaaaccttcctgccgcagaaccacagcaagccacatccagattctacccaggaagagcgagaaaaattcatcaggtcaaaatatgagttacaagagtttcttgagccaagcctacggattgtttctcatcagtctagcgactccgggaaacatgcaggcagtgcctcccattctgtcagttccaagagcgaagtaggcatgattgagttcatcggaatattgaatgtcaaggtgaaaggaggcaccaacctagccatcagagacatgtcaagcagtgatccttatgtagtcctgacccttgggcaacagaaagcgcaaacctcggtgatcaaagccaacctgaaccctgtctggaacgaagaactcaagctctctgttcctcagcaatacggccctctcaaactgcaagtgttcgaccacgacatgctgtccaaggacgacctgatgggggaggccgagatcgacctgcagccgatgatcaacgcggcggcggcgttcggcgacccggggctgctcggcgaccggcagatcggccggtggctcaagtccggcgacaacgcgctcgtcagggacagcgccgtcgtggtcgccggcggcgaggtgaggcaggagctggccctcaagctgcagttcaccgagtccggcgaggtggagctggagatgcagtggtttccactcaacatgtag</cdnaseq>

Protein Sequence

<aaseq>MSGRRDDSAKMAKLKELLHRSENRICADCSAPDPKWASANIGVF ICLKCSGVHRSLGTHISKVLSVTLDQWSDNEIDNVIEVGGNSHANAIYETFLPQNHSK PHPDSTQEEREKFIRSKYELQEFLEPSLRIVSHQSSDSGKHAGSASHSVSSKSEVGMI EFIGILNVKVKGGTNLAIRDMSSSDPYVVLTLGQQKAQTSVIKANLNPVWNEELKLSV PQQYGPLKLQVFDHDMLSKDDLMGEAEIDLQPMINAAAAFGDPGLLGDRQIGRWLKSG DNALVRDSAVVVAGGEVRQELALKLQFTESGEVELEMQWFPLNM</aaseq>

Gene Sequence

<dnaseqindica>544..568#879..963#1358..1433#1608..1771#1973..2090#2197..2313#2457..2552#2819..3100#accgaccaatccccatggagctgctgctgtaatccacacgacagagtcagagatctggggactaagtcccaagaacatccctccctcccctcccagccaggagaaatccaaggtaatccagaatctcccttgagcattcctgcaaatcctgggttttttttttcaattcttggtttcttgatgtctctcaagtataggcgatatcctgaattcctttcatcatggttaggctgttcttagcgctttgctgaattgcatttcttcgaattcatttcatcgcgctgcaccgattgctgttcttctatggatttgacactgaaaaagggggacagcgtgattcactcgagttgagatttctcaggtgtcaaaaggcaaaacgacattgatgcatgagtgttcttggatgcttctttacatatgtagcaggaaactataggatgaggaaaaggaactccttgaagttcagtatttctgtttggttgatgcatatttgcaggactgaaaacattggaaagtgtaactaagcagtaagaagatctgaatatgagtggaagacgtgatgattcaggtacttttaccatcaggcactgagcattcactttctttatcactgcattgaattgcataatatgctcctgctgccctcaaaagagcaaattggagaatcagtcatattgcacagtgaagtgaataatgtgtggtgatcatgcacaaattggtgaccaaaaacaaaattctgcaacttcttggagtacttcagatttggtcattttcaatgggtgtgcatttactagtttgctctttagtgctgacagataagattttgccggtggagaaggtcttgcatgatgaattcatatttcatttttctcatgcagctaagatggcaaaactgaaggagctattgcacagaagtgaaaaccgtatctgtgctgactgcagcgcgcctgaccccaaatgggcgtaagtattttcaacctgattcaaactatctgcagagcatctgattcccagtggctgtaagactttgtagaacctgattgttcaatttgaatcagttggtggtttaagtgatcactagtaattagtttgttttcatatccttgctgtgtttttgtttgtatcctcttctcttctatttattttctctggcaatggtatttgcacaagaaaaaaaccaggcagcatgtattgaggaaaaatgaatgatgcacacacagccttaaatctgaagaatcccttccattttgccccatacctgtcattatgagcataatcaggctattgtacactgattttagttaggggcttctcttgactgatagttccttgcaattaattgtttttttccttacagatcagctaatataggagtattcatatgcctcaagtgttccggtgttcacagaagtcttggcacacacatttcaaaggtttcttcaattgcaatatagatagtgctataaatcttttttcatctttcttatccaattgaattcagcaagtttttctgtatttacagcataggcaaagtttgcactgacaattatggcatattatacatcatgttttgagcataatcaccattcagtatttgttttgagcaggttctgtcagtcacactagatcagtggagtgacaatgaaattgataacgtgatcgaagtcggtggaaattctcacgccaatgctatatatgaaaccttcctgccgcagaaccacagcaagccacatccagattctacccaggaagagcgagaaaaattcatcaggtattttattcctctgttagttcgcagcactttcaagtgcagggtatgccattctctcatctgaattcccagatacaggtcaatactttggagcttcccttttgttctgcaaattgaactgaagaaatagcttaaaaaaatgttctcctatggtgtttcagttatatcaaatgacacatacagttaattacaattcttcaggtcaaaatatgagttacaagagtttcttgagccaagcctacggattgtttctcatcagtctagcgactccgggaaacatgcaggcagtgcctcccattctgtcagttccaagagcgaagtaggcagcactgtcctaaaactgcaaattgcattttgttctaccttacttagcatgttctgcgactcttagattcaaatttagtaatccccgatttgatttgcaggtaggcatgattgagttcatcggaatattgaatgtcaaggtgaaaggaggcaccaacctagccatcagagacatgtcaagcagtgatccttatgtagtcctgacccttgggcaacaggtagtattatgaaatcctaattttctgatggtttctgggcaactaattcaagatcgaattcatcgttttgtaccacattgtctctcattcagaacatgcagaaattcttgttctaaatttcaccatatcttcgctgtgtgcagaaagcgcaaacctcggtgatcaaagccaacctgaaccctgtctggaacgaagaactcaagctctctgttcctcagcaatacggccctctcaaactggtaaatcccctcacagaatcacaaccaaaccttcgaaaatcttctaatctgtttcttccatctgatagtcaaaatagctaattgttcaccactgaaattttccggtgtgttcttccatctgacaattaattttctggtttgttcatacatctgataattagtttttctgattagtgttcatccatctgataattgtgacaattagtttctctgatccgagtgttcatccatctgataattgtgatctttgcttttcttggatgcagcaagtgttcgaccacgacatgctgtccaaggacgacctgatgggggaggccgagatcgacctgcagccgatgatcaacgcggcggcggcgttcggcgacccggggctgctcggcgaccggcagatcggccggtggctcaagtccggcgacaacgcgctcgtcagggacagcgccgtcgtggtcgccggcggcgaggtgaggcaggagctggccctcaagctgcagttcaccgagtccggcgaggtggagctggagatgcagtggtttccactcaacatgtagaacaaatcacgctgtcacttcggatttcaagctggagaattttagaaaaagaaaagatgggttttgataatgaagttcattgcatgaactgtttcagcaagtttttgcgttgtttacatggcaaattttgctgcgttcagaaattttaaatttttggtttggcacgagccattgccctgttaacttggttcatttgtgattccaataaaaaggattcttttgtgctctgggttaaattc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0198300, RefSeq:Os02g0198300