Os02g0201000

From RiceWiki
Revision as of 02:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0201000| Description = Conserved hypothetical protein| Version = NM_001052758.1 GI:115444886 GeneID:4328648| Length = 5438 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0201000

Description

Conserved hypothetical protein

Version

NM_001052758.1 GI:115444886 GeneID:4328648

Length

5438 bp

Definition

Oryza sativa Japonica Group Os02g0201000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5639106..5644543

Sequence Coding Region

5641017..5641070,5641167..5641233,5641918..5642008,5642633..5642750

Expression

GEO Profiles:Os02g0201000

Genome Context

<gbrowseImage1> name=NC_008395:5639106..5644543 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5639106..5644543 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaatagtgccatgcaatctcagcgtagcatgtcttcaatcagtacggcagcacaatcgagcgatcagcatggagctggaagtagcaccaacccaaatgagtttgtaaatcaaggacttctcctgtggaaccagactaggcaacagtgggttggaaacagaaggcacaattctcagcgtcaacaacctcgagagccaaaaataagttggaatgctacatatgagagccttctaggaagcacaaaaccatttccacaagcgatccctcttggtgaaatggtagatttcctcgtggacggctgggagcaggaaggcctatatgattag</cdnaseq>

Protein Sequence

<aaseq>MENSAMQSQRSMSSISTAAQSSDQHGAGSSTNPNEFVNQGLLLW NQTRQQWVGNRRHNSQRQQPREPKISWNATYESLLGSTKPFPQAIPLGEMVDFLVDGW EQEGLYD</aaseq>

Gene Sequence

<dnaseqindica>3474..3527#3311..3377#2536..2626#1794..1911#atagctcgcaccagataagcccccccgcctccgcctccgccgccgcccacgccgtcgccgtcgccatcgcggtcgtggttgtgttcgtctgttcgtgtactctggatcgatcgattgatcgggcgcgggtggaggaggaggaggaggagggtttcgagggggtgtgctagggtttcgagtggaggtggggggaggttgagctcagttcattcttctgtcgccgtggtgggggcgggggaggcggagccggatgctatgctgctaggctgctcgtccctgacgtcgtgggtgcgtcgcctcgtcgcctgcgttgggtacgcctttctgactctccctcaccctggctgcttcggtgttgtgctgattgacgcgcgagaatttgatttcgagtgttaggggagccgccgcgggatgatgaggcgagtttgatgcgtgcgggtaggcgcgatttcgttggttcgacgggatgaattcggtgttcatacattgatccccgttcggatttcatggatttagtaaggttttcgcgattttgtttgtaaccatgtgtagtgaccagctcgtgcccaatcagcgaggttggttatgatgggtctgacctgcttgtaatgacctggatgattgctcgatgtgttctctgtctttttgtcgatggccattagtggcacaagagaatgtttggtggtttcctaccaatgcaggttatcatcatagcacttttggccctttggcctgctgctgttaggtttcctttcagctccttttttctgctccctgcagcttgcaaacagcggactcaaggaggtttcgcataataaagctgataacacagaatagcgaaagatttcccccggtagactactattgcagcgtatatttatttgtgcctgcttattaatccattgtgtcatccaaaaacttttctttttaactgcagaaaaaaaaatgaagttatggctcatttaagaattctggctgctattatctgggaaatttacttagctgtagtagcgttttatatctaaatgctggttcaatctgtagagtataactggctagagagtttgttgcttgatgatatctataatttgaagggtacaggtttactggtatttgcaaatgagtacaatcttaaggatatgttaacttcactctaaatacatgtaggcttgaatccattgattggctattgctccttcaatcaatgggaaattcagttctgcatttttgttctacaatctagataatttgtataaacagatttatgctacgcacaagttgaagtcttattatgtttttgttggctctacctagaatccttgacacctgcttattccagccatttaggaatgaccagctccttgaaacctgctacttcaatttaggcaccatttatagcttcaaacatccaaccctattcctgtgcgaattgaactgttttctgttgcttcagcttcttcgaaccaaatgaaaaaaaattgaacatttatagtgaggactcgtaagcagtgcaaaacctgtactaatcaagtgatcaactatatgtattttccatacaattttggtttagacaatcctttgcttgtttgttgatctgtaacttctctcaattgcttggtgctaatcatttatcagtcaatactggtttgcaacagagcagaaattgttttggatgtgcgaaacctactccaataatagccgttgatgagccttcaaaaggtttaagaattcaagggcgctcaataaagcagcggagtttgtcggaggacttttggagttcaagcccgccgggaatggagaatagtgccatgcaatctcagcgtagcatgtcttcaatcagtacggcagcacaatcgagcgatcagcatggagctggaagtagcaccaacccaaatgagtttgtaaatcaaggtaaaggcattcttctgtccgtgtttgaactaaaataggcagcaggtgcccatactgttttttggaatatccatatactttcagagaacgctaaacccgtagttcatacttattgagggtcagtttcccatgctcgtatggattgcatttcagcacatggcaactgttatcttcaaattccagcgtttatgtggtccatagcaattctaaaaataatgcatcctgcatatatttgcaaaacaaatttcttacttgactatatataagtaatttaatggtgggaagcaagtgaagtgaactactcctgtgagtggccacatttccacatggacaaaaccatttcctctcaggccttctgaatcttgatccccagagtcagccctcagtttacgttagaatactagtataagacgtcgtggaatttatggctatcgaattctagagtagtcatgtgtatatttggtttacaaaatacatgtataaggaagatacatgtataagaaactcaaaacgaaaggatctttaccaaactggaactaggttattacgttacattattacgaactatacgtacatgttaggttaagttcttttatgttgattattctacttgtacaaccgtaggacttctcctgtggaaccagactaggcaacagtgggttggaaacagaaggcacaattctcagcgtcaacaacctcgagagccaaaaataaggtattcatatacagattcctgcaattatttcaaattattcatactttataagtgagtgcaaaagtggctaaatatgtgtagatgtggtgatacaaaagtggtaatgctagatttgtaggtctagtgatacagaaatgtactgttagatttgtacccattgtagtttcatattatcatgattttctattagcaacgatatgttgcacgagaaatttatagtaaagttcaatttagaagatgcctagtcaaatagtggtatataaaaatggatggatgcaataagttatctctagttcaattgtcgagtcacgaaggtatggattagccgattaggaggttttgacatgaaccaaaacagtcccctagtatgcattattattacttcatctccttgtttgccatatattagatatgttaaatacctcctttgaaaaggacgagctagtagttctgttatttcttagagggacactttgggagctgcaatcctggccgggatcccagcctggttcatttcggtgggaataggccaggatcctggctggcatttgtctcccaaacaggtcctgacttgttactcttggtaaaatctagcctaaggtctgttgtctatactgcttccaactcatcagtttgtatttgggcactgctgactgtttaccatgcctgtgcccgtcactgcagttggaatgctacatatgagagccttctaggaagcacaaaaccatttccacaagcgatccctcttggtgtaagatctcttacaaaactatgcttcatccccattttccgcacttgtctcatgcaaaaacaatgtatgaagtttctgtcggttttcaattggcaggaaatggtagatttcctcgtggacggctgggagcaggaaggcctatatgattagtgggttaaatgagtgatgaagggtgttgtttgtggggtcaaattatgaatcaccgagaatgtactcagaaaaacttcagcctttcaaagcttgtgggtgataactgcggtattcctggagacaggatggcatccctatcttaagtaaacgtaacatattctttactgctaattgtgttaacataagtttcatattgtgatatcttctcgctgtgcataattggacattgttattactaatcaatgtgcaggctctgtttagtttttttttctttttttccgcgaggtggatatgtgtcgcatctgacgtcctcttggcaatgcctttagctgattgccccttgtccattaggccattaccgtgtttatgcaggtgtgctgattgtgtcgagctgactagacaaagatggtactcctacttctcttctcctgaatatgcttcatttctcaggctctaccagagggttttggatgtcttcgcctcctttccagatgcctctctccggactcctgtcctcgtgttctttctcgctttatatgcgaaacccttcacagcaatacgatcgcatcgccatcttcaagcagagtaactaactgacaaattcacttcactgcggtttagtggtgcattagcattttatacacactttgctggccatggctttagctcgccaatgcctcagcaaacgcctcgccgccggctgcgctctggcgaggccactgcacgcggcgtcgccggtggcggcggcggctgccaattctcatgggccgctcaactttcgtgccctcttctcgtcggcgggagccgacgccgccgccaccaccggcggctgcgctcctgcgaaaggcgacggtcacagccgtgaggtcgccgtcgtggaccgctcgcgccgccgctggccgtggcgagacctccgcgacttcgtcccgctccgcctcgtcgacggtaacgtaccacttactcagttagttactcctgattttcttattcttattttattttaattttaaaaataagcattttcagaacttatttttaatatatgaattttttagcctaggactgacgtgacaaaacaacattattatacattactaatctaaatagtgtgactaatctaaactatccgacagctgcgggtggcatgatgatattattttttcacgtcatatgagttagtgtagcaaagactcagattttaaaagtaaatttaagaaaggtttatttttgaaataaaaattaaaaagttatataaaaaaaactctgttactcctccccattgtacgccggcgagcattgacgagcgtggttgcttgcacgtacacacgcaggcatcgggagcgcgctgtcgcaggtggcggagacgctgacccggccgctgacggggaaggtgcgggaggacgaggagcggtacaggctgcggttcgaggtgccgggcctcgggaaggacgacgtccgcgtctacgtggacgacggcgtgctcgccatccacggcgagaagcgcgacgtggtggaggaggaccgcggccgcgacggcgacggcgagtgctgggcggcggcgacgtaccacgccggcctgctcctcccggaggacgcggtggcggaggggatcacggcggaggtgagggacggcgtgctgcacgtcaccgtgccccgctcgccggagaggaagaggagcgtcaccgaggtcaaggtgcggtagtagcagcgtggactgagcctggctgcttgggcctcgtttgtatgggcctttatcccggcccatcttgtgtatgggcctggattctgtaattaagtactgtatgggcctactaccataatgtggcattctggagttctttattaatgccacattaccctttatgaatggcctcgttcatagtcttgatgaattttgagtgaatttcaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0201000, RefSeq:Os02g0201000