Os02g0201500

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Revision as of 02:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0201500| Description = EF-Hand type domain containing protein| Version = NM_001052760.2 GI:297598780 GeneID:4328650| Length = 4873 bp| Def...")
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Gene Name

Os02g0201500

Description

EF-Hand type domain containing protein

Version

NM_001052760.2 GI:297598780 GeneID:4328650

Length

4873 bp

Definition

Oryza sativa Japonica Group Os02g0201500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5663557..5668429

Sequence Coding Region

5667737..5668225

Expression

GEO Profiles:Os02g0201500

Genome Context

<gbrowseImage1> name=NC_008395:5663557..5668429 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5663557..5668429 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccggcgcggtggcgacccatgcggcggagcccccccgcccatccgcagcagcagcggaggtggcggtggcggggggagggggagggtgcggggcggcgaggaagccggcggcgacgatggagcacgtgctgctggcgctgcacgagacggaggcggagagggaggcgcggatccgcgccatgttcggcttcttcgacgccgcggggcggggccacctcgaccacgcgcagatcgaggccggcctcgccgcgctccacctcccgccgccgccgccgcccgaggagggcggcggcggctacgcccgcgagctgctccgcgcgtgcgaccgcgaccgcgacggccgcgtcggctacgacgacttccgcaggtacatggacgacaaggagctggagctctaccgcatcttccaggccatcgacgtcgagcacaacggctgcatcctccccgaggagctctggcacgccctcgtcaaggctggtaactaa</cdnaseq>

Protein Sequence

<aaseq>MSGAVATHAAEPPRPSAAAAEVAVAGGGGGCGAARKPAATMEHV LLALHETEAEREARIRAMFGFFDAAGRGHLDHAQIEAGLAALHLPPPPPPEEGGGGYA RELLRACDRDRDGRVGYDDFRRYMDDKELELYRIFQAIDVEHNGCILPEELWHALVKA GN</aaseq>

Gene Sequence

<dnaseqindica>205..693#ggcaggcatatgcatagagcatagtagtagtagcgttgcagggagagagaggctcttctccttttgatgagcaagcagctcaagagctcatcagcaacagcatcgccatcgtgacagaatattcccttccgacaccacctccgcttcaccctcgcatcgccctcaccgatcacccgccccaaaaccctcgccgtcgcggccgccatgtccggcgcggtggcgacccatgcggcggagcccccccgcccatccgcagcagcagcggaggtggcggtggcggggggagggggagggtgcggggcggcgaggaagccggcggcgacgatggagcacgtgctgctggcgctgcacgagacggaggcggagagggaggcgcggatccgcgccatgttcggcttcttcgacgccgcggggcggggccacctcgaccacgcgcagatcgaggccggcctcgccgcgctccacctcccgccgccgccgccgcccgaggagggcggcggcggctacgcccgcgagctgctccgcgcgtgcgaccgcgaccgcgacggccgcgtcggctacgacgacttccgcaggtacatggacgacaaggagctggagctctaccgcatcttccaggccatcgacgtcgagcacaacggctgcatcctccccgaggagctctggcacgccctcgtcaaggctggtaactaactagaatacttcttagttcttcttctgctgctgctccatccatccatcctcctcataaatcctaatgcgatgctaaatgtgcttcacgtgacaccatgagaccattagttgtatctaggaaaaaatccaaaaaaaatggtgtccaaatttaatcatgatgggagttgctcgagcaaatgtggcacgcggtattgacaaattgacatgcagtaagcctaggctttgtgattttctgaggtaatttagttgtgcaactttgctttctagttcaccttcgcatgttgctagcactggaagctacattgggtcccatggaagtcgaagcgtatgcaatgcatgcttcatgaatggaataggtacagcggatggctgttatgttgcatattagtagtagataccttctccggggagttttagacgtgctttgatgcttcggtcatgcgaaatgcaaaatgcagttaagagtggaggcgaaggcctcaaggccatggaaaatttgaccgaattgtgcgtaccaggggtgaaaccaggggaggcagggacattcctgctcgagttacaacctatgaacttctctggaaccttagatccaaacctcctagttcagttggagaacccaagttttgacctccgagaaattgccttgacaagttgacatcatataaggataatattgagcagaaaaaaaaaactcaagagcaaggaaagaatatatcatttcagttcatctgcacttgtatatgaaatggacaaatggatttgatgatacatttcatgaggatgtcttgcaaaaacaggatacatccgacttcaacttttcaacttatttctcatgaaacagcaactaaatatgccttgttaactaatttctggtcatcatgatttattgggttgttctgctgatctcattttgtttgaataacctgaactcctttctgcctttaaactgtcgatggtaataaaatattttagggatgagtatgagcatttcacagccaaagctattgagcctgttcctttctgttaatcacaaatttatgggcgtgcttgaacaccatgaagcaagatagagagaaaaagaatccatctcagttgattgagctgagcttgcccaccgccggacatatacatcaagtctcttctttctggtttctaacagggctaccagcactagatcaagaagaaaagaaagcgtagtactactaggatccacccatagcaattgcagtgtaataattatggctgtctgctgatggaatgaatttgatttctttttttcataatttcttacccgataacaagtcaaattgaaaaatctgctgcttagtattcatattgcaatgtcccaaattcggtggtttaagttccaaccttaaaagtgaaaactagcaggtttttttccctattattaaatcactatgtcctaggaaagcacctgataattgtagtccttttgatgtcttacaagtaatatcagtttgctgtttgcaggcatagaaattgatgacgaggagcttgcaagatttgttgagcatgtggataaggataataatggaattattacttttgaagaatggagggactttcttttgctttaccctcatgaggcaaccattgagaacatctaccatcattgggaaagagtctgccttgtagatataggcgagcaggctgctataccagaacgaataagtaaacatgcaagcgcaagcaaatatctaattgcaggaggtgtttctggtgcaacatcccgtactgctactgcacctcttgaccgtctcaaagtcatcatgcaagtacaaacaaaccgtattacagtattacaagcagtgaaggatatatggagagagggcagtctgcgtggtttcttcagaggaaatggattaaatgtggtaaaggttgctccagaaagtgcaataagattttatgcctacgaaatgctaaaagaatacataatgaaaagtaaaggagaaaataagagcgacattggtacttctggacgtctgatggctggtggtttggctggagcagtggcacagacagcaatttatcccatagatttagtaaagactcgactgcagacttttgcatgtggtagtggtaaaattcctagccttggtgcactatcaagagacatttggatgcaggaaggtcctcgagcattttacagaggcctcgttccatcattgcttggtatggttccgtatgctggaattgatcttactgtttatgaaacactgaaagaaatgtccaagacatatgtcctcaaggatagcggtaaactccgtgcaaaaaattctgtttacatcacagtcctctcaattttcaattgatttcgctaaagtataatcttttatgcagatcctggtcctttagtccaactaggttgtgggacagtctcaggagctctaggagcaacatgtgtttaccctttgcaagtcatcagaacaaggtgcgcagtagcttgtcaatagaaatccatattggtaagagggacacctcttctgaccttgtttactgtattatacttctagactgcaagctcaacgagccaattcagaggctgcatatagagggatgtctgatgttttctggaaaacactgcagcatgagggaatttccggattctacaaagggcttgtaccaaatcttctcaaagtggttccagctgcaagtataacatatcttgtttatgagacaatgaagaaaagtctatcactcgattaaattcttctgtctattttccataccagccatcattattggcatggctgactgtagagatactgttgaagcatggggttattggttgggtaggtgctaacttttcccccgaagtgaaagatggtattttgccttcaggataagagttgaaaagtcttgaccgcaatgtttctcctaaatatgaatggaagaaataaaaaagagtagtactcatcagatcatcaagcgcccatgatgagacacaggtatctctgcttactactagctcttcacttatatgatttctggatcaactttatacttagaaagtttatagcataaagttcttcattttcttgttgtacagcactgagctcacacagaggatattatggcaattaaactgtagttactgtaccatatcaacttagcaagcaccaactaggcaattcatgttcgccgggcagtggcctctgcctttcagttgtttattcttataggccgccatgaatgtttcatcaatataatcagtatttactagatattcagttatttgtggaactctactggaaactattggcatgggagcatgcgaaagtatcacggattcatgttatttaagctccatcaaataatttagattctccatcttagattcatgttcgagattgatatctcaaagaggtatcatttgtcatcatactagtatgtaattatttttccaagagttgctacaaaaattattccctgtgttttaaagcagctattgggtcctagattcccaagctgaaaaggaattcctatgattttaagattgtctggtggattaaatctggatttcccattttcacgttctttaatattttcctttggtgattcaattccttttatatgaatgtacattccctctttcccttatccttatttctagatctcaaatctggaattatatttgaaggtttgttatgtgctcgttaaagttagatcaatcttcttgatgtgttggatagctagaactgatttgtgcatcttgatgttgatctcacaattcctaaaattaaatatctatgttttgacgttggctttctcatgtctttgcagtgggcattcccgggatctagttagttgttgagttatgatctgctgaaggctccttttgctactgaataagggggaaaatttgttcatacaaattgagatcatcacacattgaaggaagaactctttctgctcctgagctttgacaggagcatgaggtgtgaccttcaccttccttgaagctgcccagcagggcactgctttacatgtactttctaccttatatacctacatatatgtaactacatgatcaacctgggcatcgtcttctggtgacccactgcatcatgcaacataataacctaactaacaagagagaatgtaagaaagcggtaagctgctcgctcttttatatgcttatctaccgttctcgtggatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0201500, RefSeq:Os02g0201500