Os02g0205300

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Revision as of 02:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0205300| Description = Similar to TAT-binding protein homolog (Fragment)| Version = NM_001052783.1 GI:115444936 GeneID:4328674| Length = 47...")
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Gene Name

Os02g0205300

Description

Similar to TAT-binding protein homolog (Fragment)

Version

NM_001052783.1 GI:115444936 GeneID:4328674

Length

4724 bp

Definition

Oryza sativa Japonica Group Os02g0205300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5918931..5923654

Sequence Coding Region

5919271..5919411,5920105..5920215,5920303..5920401,5920486..5920642,5920774..5920937
,5921017..5921079,5921153..5921377,5922038..5922135,5923283..5923499

Expression

GEO Profiles:Os02g0205300

Genome Context

<gbrowseImage1> name=NC_008395:5918931..5923654 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5918931..5923654 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgaggctgcggcggcgaaggggaggggcggcgccggaggaggaggtggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccggcagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgagttagaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtggtgaaggtcatgggtaaatcaaaggttctagtgaaggtacatccagaaggcaaatatgtggtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctcttcgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaatcttatgaaagttgagaaggttcctgattctacttatgatatgattggaggtcttgatcagcaaatcaaagagatcaaagaggtcattgaacttcctatcaaacatccagagctatttgagagtcttggaattgcccaaccaaagggtgtccttctctatggccctccaggcacaggaaaaacattgttggcacgtgcagttgctcatcacactgactgcaccttcatcagggtgtctggttccgagttagttcagaagtacattggtgagggttctcggatggtccgtgaactctttgttatggccagggaacatgcaccatccattattttcatggatgaaatagactccattggatctgctaggatggagtctggaactggcaacggtgacagtgaagtccagcgaaccatgcttgagcttctgaaccaacttgatggttttgaagcatcaaacaaaataaaggttctgatggcaacaaataggatagacatcttggatcaggcccttctgaggcctggtcgcatagacaggaaaattgaatttcctaatcctaatgaggattcacgctttgatatcttgaagattcattcaagaaaaatgaacttgatgcgtggtattgatctgaaaaagatcgctgaaaagatgaatggggcttcaggagccgagctcaaggcggtctgcacagaagctggaatgtttgctcttcgtgagagaagggtgcatgtaacacaagaggactttgagatggcagtggcgaaggtgatgaagaaagacacggaaaagaacatgtccctacggaagctctggaagtga</cdnaseq>

Protein Sequence

<aaseq>MATVAMDISKPPPAAGGDEAAAAKGRGGAGGGGGEGLRQYYLQH IHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKV LVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKV PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM ESGTGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE FPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER RVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK</aaseq>

Gene Sequence

<dnaseqindica>4244..4384#3440..3550#3254..3352#3013..3169#2718..2881#2576..2638#2278..2502#1520..1617#156..372#gagggagacccaacccagcaagcaagcaaacccaaacccacccacctccgctccgcggccgtcttcttcttccctttcttccaccgcaagaagaagaagaaaccccacccgagccaagccccacacacaaagcgagcgactcggcggcggcggcgatggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgaggctgcggcggcgaaggggaggggcggcgccggaggaggaggtggggaggggctgcggcagtactacctgcagcacatccacgacctgcagctccagatccggcagaagacgcacaacctcaaccgcctcgaggcccagcgcaacgacctcaactcccgaggtgacgtaaccctagctgtatcaccgtgtgggtgcgatgctgtccgcggcttgatgtggccgaattggatcggcgcgtgcgttggtggaaaacctaggtttactccgtgggtgtgtgtgcggatcgtagccaaaggcgcgatctttagttgcgatgtttgggcaagaactctcggggccaaacccgttaggcaattagggaaccctagcgtacttgtatggcacgcatttgtagccacaggcatgatttttttttagttagttgagctgctggttggccatatgctgatctttagaacttccgtcaaattttggtggcccccattttgatcaattatgtagtattttgcaggatattttttcttgatttgcattagatgtagctattatctgctttagttgtgcatctctagatcagttagtttatgtgcgcttggatgccaaatctagttgcgctatagttggccatttgcttatcttgacaactttttgtcagatttcgattgttcccttttcctccattgtctagtattttacaggatagttgattttgcatcaaatggagccatctgctttagtcgtgtattgatgtttaaacggcagactgtctattgccgtagtcagtttgagttggaaactatatacatgcgatagttttgtttagctgcgcttgggcaccacttaggcagcaaatttgaacatcgtcagtttcttgattgcattgaatgtctattgcctactggtatacaccgatgttctcgagttgtgagtaaataaacggcagttctgcctttcaagcatttcttttatttggttgcaaaaatgttcttagtttttcagaaattgttccatgttgcctttcagatgaggattttgtgttacttttaactttctaatgcattgtttcatattgagaatccgaaactgaactccctctatacgaacatgattaagtggggttcctgtactccttattttccatttcagtgtgatttctagcaatatagaactatacctatattaggaatctctgtaaagtgtgaatattctatccttgatttgtggagttctacttgatgcatgtgaaatgttatctttttcttctttactatttccctctaaatatgttgtgcaatttcatcttgcagttagaatgctcagggaagagctgcagttgcttcaagaacctggctcgtatgttggtgaggtggtgaaggtcatgggtaaatcaaaggttctagtgaaggtacattctctttattcttttacatgatcttttctatgatcaatactttaggtgtgccaattttattacttgtccatggacttattacttaattttgattggttgaagcatcaaacctagcatttgatccatctcttgtggttgtctatcattcactctctgttgtaaatttttctatgtgctgtgacaataacaatcttctagttcaccatacatagtcaactttgcttaactaccttattaatcctgattgacttcagcttgtcatatttaatagcccataaatgagcattatttctgctcttatagacaactctgcagttatgcataaaaagggtgatccagaactcacagaactccatacatgaaactcatgttattactctggcaagcccataagtgcttctgaatctcaagtactcctatcttgttattgtaaaaatgtgaatgcttaggcctatggctgtgactatatgtggaagtgcaaatttcttggtttcttgtttggctttttatatttatttattaatagcttgatgtgactgtattgacatgctcacgatctgtcacattgtcatttggttctgttagccctttttgtaatggaaatcctaaatttctgtttaccagtgctattaacttctcaatataattattcaggtacatccagaaggcaaatatgtggtggatattgataaaagcattgatattacaaagatcacaccttcaacaagagttgctcttcgaaatgatagctatatgcttcatttgatcctgccaagcaaagttgatccgttggtcaatcttatgaaagttgagaaggttcctgattctacttatgatatgattggaggtcttgatcagcaaatcaaagagatcaaagaggtttgtatataatttcaatgtactattgatgcatcgcatatagcacattctgactcatgaactcaacttttaggtcattgaacttcctatcaaacatccagagctatttgagagtcttggaattgcccaaccaaaggtttgaacttcttaacaatatcatcttaaacgatcctatttttaagtattagcagaaaatattaactctcttttttcagggtgtccttctctatggccctccaggcacaggaaaaacattgttggcacgtgcagttgctcatcacactgactgcaccttcatcagggtgtctggttccgagttagttcagaagtacattggtgagggttctcggatggtccgtgaactctttgttatggccaggtaaactgagcaaaaataccctgagttcttctattatagtgaaagcattattggcttgcaatctgaactatagttctacatatgcactctgttgtcagtgtaggcttaattgtttggttaacatattacagggaacatgcaccatccattattttcatggatgaaatagactccattggatctgctaggatggagtctggaactggcaacggtgacagtgaagtccagcgaaccatgcttgagcttctgaaccaacttgatggttttgaagcatcaaacaaaataaaggtgtgccactgctttgcatatgttatatgtgccgattaataaccgtgaaggagtttattgtgacacgttaaatgttccatgcaggttctgatggcaacaaataggatagacatcttggatcaggcccttctgaggcctggtcgcatagacaggaaaattgaatttcctaatcctaatgaggatgtaagtgctgataacttactgtatattgtttgtgttaatttttccatgatttcttgtgttgatgatgcgcttatcttttgctttcagtcacgctttgatatcttgaagattcattcaagaaaaatgaacttgatgcgtggtattgatctgaaaaagatcgctgaaaagatgaatggggcttcaggagccgagctcaaggtttgtttagtctttactttcatctgttataaaacattgtactgtgtatttgtctcacacgagtgattattgcgagattagtttaaatccctccgctacttccgtttgtcatgcgccatgcgcgggctaccgaaccaacactgtgacattgccactttgatcgatgctattgctacatgatttatttgtcccttggtatcgctgcacatgcctaatatgatgatcaattgtgaatggagggagcattgaaaaattattattgtgcttacatagaaggctcctgacgagacttttctattacccctaagtgcatctatacatgtttcccgttccattttttttctcttgtagttcaagtttccattaagatgtccaaggattaacaaggttcattgactctggatttaattgagctaacgttgtgatgtattgtggcagcaacaccgaagttcgaattacattgtgctggtctaacgctaccagtagtgtcatgacatcaaaatgtttaactagtgtctctggaaaattgagcagaatgttctatgcagaatttcactgcatgtgcacttatgaagagttccatttaatttagtttcaaaacaatgtgcatatatacacagcactatagaacgtcatagctcctataccttgtgatcatgcaactttattcactttctctttcatcatcttcaggcggtctgcacagaagctggaatgtttgctcttcgtgagagaagggtgcatgtaacacaagaggactttgagatggcagtggcgaaggtgatgaagaaagacacggaaaagaacatgtccctacggaagctctggaagtgaagctcacgtcttaatagcctaagctttcactgcatcgctgaagcagcggaagcatgtaactgcatgttgtggacttcttccatgtgctttagaatatgttgttccatggttaactttcagattttaagatgcacctatgataatatgatgttgaaaagtttaatttattgaattggctagatacacgatatgacattgctttcttgcaatgtacccctacgctgcctacttgggttgtttgcttgcctgttttgtgatctctcaagtcagaacatttgatttttcacccgctgtttcgccatgtgggtggttttgctgtgtcatgattgctgttgagatg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0205300, RefSeq:Os02g0205300