Os10g0399200

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Revision as of 08:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0399200| Description = Similar to Cystathionine gamma-synthase isoform 2 (EC 4.2.99.9)| Version = NM_001071074.1 GI:115481891 GeneID:4348560...")
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Gene Name

Os10g0399200

Description

Similar to Cystathionine gamma-synthase isoform 2 (EC 4.2.99.9)

Version

NM_001071074.1 GI:115481891 GeneID:4348560

Length

1729 bp

Definition

Oryza sativa Japonica Group Os10g0399200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13806623..13808351

Sequence Coding Region

13806623..13806746,13806869..13807191,13807289..13807642,13807734..13808351

Expression

GEO Profiles:Os10g0399200

Genome Context

<gbrowseImage1> name=NC_008403:13806623..13808351 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13806623..13808351 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaagtcatcgtctctcgtgacgaaggttttggtgcagcggcggcggcgcgttcaccgttctcgccgttctcccaccaagccggagcgcgctgccgccgccgacacgttcggttccctcgcgggttgtccctcgtcgccggagtatccggtggtgccggacttggacgactgcgtcgtcgacaccgccgtggatgacgctcccgtggtggcggcggaggcggcaggccgacgcgcgtcggacgagacgctggcggtgcacgccggggagaagctcgggagcggcgccgctgagacggactcgatcgcgacgccgatcgtgagcggcacgacgcactggttcagggactcggcggacctcatcgccttccgggaaggctggcggcggagcttcgagtacgggcggtacggaaacccgacggtgaaggtgctggaggagaagatcagcgcgctggagagggcggaggcgacgctggtgacctcctccggcatgaacgccatcgtcgccacgctgctcgccctcgtcccccccggcggccacgtcgtcgtcaccgccgactgctacagcgaggcccgcgccttcatccacgacaagctatccaagatgggcatcacgtcgacgttcgtggatcttgacgacgacatggaggcgctggaatccgttcttgatgaggacgaggtgacgatgttctacgccgactcgatgacgaacccacacctgaaggtcgtcgacgtggcacgcgtggcggagctgtgccaccggaggggcgcgctggtgtgcatcgacagcacgctggcgtcgcccatcaaccagaagccgctcgccctcggagccgacgtggtcctccactccgccaccaagtacatcgccggccaccatgacgtcatcgccggctgtgtcagcggctcagaggccctcatctcgaggatacgcgcgtggcaccacgacctcggcggcgccatcagtccgaacgcggcgtacatgatcattcggggattgaagacgttggcgctgcgggtggaggcgcagaacaggacggcgctgcggatggcgcggctgctggagaagcaccccaagatcgagcgcgtctactaccctgggctggagagcagcccgtggcacggcgtcgcgacgaggcagatggccggcgccggcggcgtggtcagcttcgaggtggcgtcggacatgcgcggcgtgatgaggttcgtggacgcgctggagttgccgctcatcgcgacgtcgctcggcggctgcgagagccttgtccagcagccggccgtcatgtcctactggggtaagagtgaggaggagaaggcgaagaatgggatcaaggacaactttgtgaggttcagttttgggatcgagaagtttgaggatctcagggatgatatactccaagccctagagaagatttaa</cdnaseq>

Protein Sequence

<aaseq>MAKSSSLVTKVLVQRRRRVHRSRRSPTKPERAAAADTFGSLAGC PSSPEYPVVPDLDDCVVDTAVDDAPVVAAEAAGRRASDETLAVHAGEKLGSGAAETDS IATPIVSGTTHWFRDSADLIAFREGWRRSFEYGRYGNPTVKVLEEKISALERAEATLV TSSGMNAIVATLLALVPPGGHVVVTADCYSEARAFIHDKLSKMGITSTFVDLDDDMEA LESVLDEDEVTMFYADSMTNPHLKVVDVARVAELCHRRGALVCIDSTLASPINQKPLA LGADVVLHSATKYIAGHHDVIAGCVSGSEALISRIRAWHHDLGGAISPNAAYMIIRGL KTLALRVEAQNRTALRMARLLEKHPKIERVYYPGLESSPWHGVATRQMAGAGGVVSFE VASDMRGVMRFVDALELPLIATSLGGCESLVQQPAVMSYWGKSEEEKAKNGIKDNFVR FSFGIEKFEDLRDDILQALEKI</aaseq>

Gene Sequence

<dnaseqindica>1606..1729#1161..1483#710..1063#1..618#atggcgaagtcatcgtctctcgtgacgaaggttttggtgcagcggcggcggcgcgttcaccgttctcgccgttctcccaccaagccggagcgcgctgccgccgccgacacgttcggttccctcgcgggttgtccctcgtcgccggagtatccggtggtgccggacttggacgactgcgtcgtcgacaccgccgtggatgacgctcccgtggtggcggcggaggcggcaggccgacgcgcgtcggacgagacgctggcggtgcacgccggggagaagctcgggagcggcgccgctgagacggactcgatcgcgacgccgatcgtgagcggcacgacgcactggttcagggactcggcggacctcatcgccttccgggaaggctggcggcggagcttcgagtacgggcggtacggaaacccgacggtgaaggtgctggaggagaagatcagcgcgctggagagggcggaggcgacgctggtgacctcctccggcatgaacgccatcgtcgccacgctgctcgccctcgtcccccccggcggccacgtcgtcgtcaccgccgactgctacagcgaggcccgcgccttcatccacgacaagctatccaagatgggcatcacggtatgtatacacaattaatggcagcttcatcagagcatggctttacttgcaatctgattctaacaatggcgttcgttccatggatttgcagtcgacgttcgtggatcttgacgacgacatggaggcgctggaatccgttcttgatgaggacgaggtgacgatgttctacgccgactcgatgacgaacccacacctgaaggtcgtcgacgtggcacgcgtggcggagctgtgccaccggaggggcgcgctggtgtgcatcgacagcacgctggcgtcgcccatcaaccagaagccgctcgccctcggagccgacgtggtcctccactccgccaccaagtacatcgccggccaccatgacgtcatcgccggctgtgtcagcggctcagaggccctcatctcgaggatacgcgcgtggcaccacgacctcggcggcgccatcagtccggtaaccaaaccaaaaacaaaaacaaaaacaaaagcaaatttgcacaaattcactttatgtcattccaaaactgactgtaatttaatttgtcatttagaacgcggcgtacatgatcattcggggattgaagacgttggcgctgcgggtggaggcgcagaacaggacggcgctgcggatggcgcggctgctggagaagcaccccaagatcgagcgcgtctactaccctgggctggagagcagcccgtggcacggcgtcgcgacgaggcagatggccggcgccggcggcgtggtcagcttcgaggtggcgtcggacatgcgcggcgtgatgaggttcgtggacgcgctggagttgccgctcatcgcgacgtcgctcggcggctgcgagagccttgtccagcagccggccgtcatgtcctactggtaattaattaagctcctgccctctgtaataatttacaagaggagtatgtgattaacatctgaagtaatttgaagaaactgatttgattaatgctaatgtttacgtggttaattattttcaggggtaagagtgaggaggagaaggcgaagaatgggatcaaggacaactttgtgaggttcagttttgggatcgagaagtttgaggatctcagggatgatatactccaagccctagagaagatttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0399200, RefSeq:Os10g0399200