Os02g0215000

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Revision as of 02:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0215000| Description = Conserved hypothetical protein| Version = NM_001052820.1 GI:115445010 GeneID:4328718| Length = 8452 bp| Definition ...")
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Gene Name

Os02g0215000

Description

Conserved hypothetical protein

Version

NM_001052820.1 GI:115445010 GeneID:4328718

Length

8452 bp

Definition

Oryza sativa Japonica Group Os02g0215000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6462242..6470693

Sequence Coding Region

6462845..6463015,6463875..6463961,6464485..6464678,6465181..6465292,6465373..6465417
,6465522..6465626,6465846..6465896,6467158..6467213,6467684..6467753
,6468188..6468292,6468425..6468537,6469254..6469434,6469535..6470352
,6470410..6470506

Expression

GEO Profiles:Os02g0215000

Genome Context

<gbrowseImage1> name=NC_008395:6462242..6470693 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6462242..6470693 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccatccatggcggttccccgccggcgacgagctctgcccggtctgcgccgcgccgcacttccccttctgcccgcctccgccccaccccttccaccctcctcctcctcctcctcccccgccggagtatcacgtccccttccaccctccgccgccgatgtgggcccccccggggccgcacccctacgaggtcctcgacatggaggccccccacaagcggatgcgcgtgggcgatccgtacggcgacgggatgcctcccccgctgcccccgccgccgccgccggggatggttcccgtggagggcgaccggctgctcggcttgatccgggatcacggccgccctccgtttccgccgccgcctgggatgttgcacggcgaaccgtacccacctcctgatcggttcggctatggaggagggagaggctatcctcctcctccaaattatgacaatccctatgcgcatgaaggcagttttcccgattacgagcacgccgggaggtttccacctgcgcatgaaaggcttgccgccttaggttcaagttttgtgcctggaggacctcaggaggggtatttcaaccatgatcaccgctacaatcgcttccaacgctcggaatcgcctgttgcgccgccgctccctccaccggctcgataccctgaggcgagaagccgttatgattcccacggttggcatcctgaggcggatgttccaccaccaccaccaccactggagcctcctgtaccgtcttcctcagattaccatgccaagccacctttgcaggctgtgaaatcatctttgtttcctattcattccggttctccagccgcaactgcgcgcccacctagttctcatactttgcatcaagctcacctgatgcctaatgcaaatcgttacaatggacctatccacaatgaggtaccaggtttggcatatcaaccacacttagagcaacatttaggaggtggaaggcaaacccaagctcagcattccatcaacaatgctaaaatcagtgtaattagtgcctgtgacttgttcaagcagccacttcgtgggtcacggcctgatcatattgttatcatcctccgtgggctgccaggtagtggaaagagctatcttgcaaaggcattgcgtgaccttgaagttgagaatggtggaaatgcacctagaattcattcgatggatgactatttcatgattgaggttgagaagaaagttgaagacaatgaagggtcaaaatcttctagtacatccaaaggaagaaagcagctgaccaagaaagtgatcgagtactgttatgagcctgagatggaggagacgtacagatcaagcatgttgaacgcatttaagaagacccttgatgaagggaattttacatttgtgattgtggatgaccgcaatctgcgggtagctgattttgctcaattttgggcaagtgcgaagaaatcaggctatgaagtgtacctgctggaggcaccatacaaggatccaacaggctgtgctgctaggaatgtgcatgggtttacagtagatgatgtgaacaagatggcagcagactgggaagaggctccaccactatatcttcgactagacatccattcattattcaacgatgacaatctacgcgagcattccattcaagaggtggatatggagacagaagacactgatggggccagtaacacagcaactagtactgaagctgaaaacacacagaaggctgtgtctgaatcactagataatggacatgatcaaggagcagggaagaagtgggactcgtcagaagaagacgacctggatggctacaaagagctaggacagagtaaatggtcaaaagattttgatgaggataccgagaagtctgaccatgcagaaggaagtacgcatgctctttctggattggctcaaacctacagcacgcatcgaaaaacagttacctggggagatcggctagaaaagggtggtttttctattggtgcagctaaaagaagactcacttcttcattaatcataggacccggatcagggtacaatttggtttccaaccccttggctgaagataattccaagcaggcaaagggggtaatcaacaccgatacaaagaagcgattcagcgaacaacttcgtgacgaaggtgaatccttcagggcagttttcgataagaggaggcagcgcgtcggagtttttggcaacggagatggcgagtga</cdnaseq>

Protein Sequence

<aaseq>MDHPWRFPAGDELCPVCAAPHFPFCPPPPHPFHPPPPPPPPPEY HVPFHPPPPMWAPPGPHPYEVLDMEAPHKRMRVGDPYGDGMPPPLPPPPPPGMVPVEG DRLLGLIRDHGRPPFPPPPGMLHGEPYPPPDRFGYGGGRGYPPPPNYDNPYAHEGSFP DYEHAGRFPPAHERLAALGSSFVPGGPQEGYFNHDHRYNRFQRSESPVAPPLPPPARY PEARSRYDSHGWHPEADVPPPPPPLEPPVPSSSDYHAKPPLQAVKSSLFPIHSGSPAA TARPPSSHTLHQAHLMPNANRYNGPIHNEVPGLAYQPHLEQHLGGGRQTQAQHSINNA KISVISACDLFKQPLRGSRPDHIVIILRGLPGSGKSYLAKALRDLEVENGGNAPRIHS MDDYFMIEVEKKVEDNEGSKSSSTSKGRKQLTKKVIEYCYEPEMEETYRSSMLNAFKK TLDEGNFTFVIVDDRNLRVADFAQFWASAKKSGYEVYLLEAPYKDPTGCAARNVHGFT VDDVNKMAADWEEAPPLYLRLDIHSLFNDDNLREHSIQEVDMETEDTDGASNTATSTE AENTQKAVSESLDNGHDQGAGKKWDSSEEDDLDGYKELGQSKWSKDFDEDTEKSDHAE GSTHALSGLAQTYSTHRKTVTWGDRLEKGGFSIGAAKRRLTSSLIIGPGSGYNLVSNP LAEDNSKQAKGVINTDTKKRFSEQLRDEGESFRAVFDKRRQRVGVFGNGDGE</aaseq>

Gene Sequence

<dnaseqindica>7679..7849#6733..6819#6016..6209#5402..5513#5277..5321#5068..5172#4798..4848#3481..3536#2941..3010#2402..2506#2157..2269#1260..1440#342..1159#188..284#ctggttccataggctttttctggctacccagacgaggcgggcggcgccgcagccgtccacccccgcggaccccaagcccaggaaggaagcttctcgaatcttctcgaagctccctgatccttcctcctcccccaaaaccctagatccctaaccccattcggccaccaccaccgccaccatctcccccatggaccatccatggcggttccccgccggcgacgagctctgcccggtctgcgccgcgccgcacttccccttctgcccgcctccgccccaccccttcccctacgatctccacccgcctccgccccctcctccgccggagtaccacgcccccttccaccctcctcctcctcctcctcccccgccggagtatcacgtccccttccaccctccgccgccgatgtgggcccccccggggccgcacccctacgaggtcctcgacatggaggccccccacaagcggatgcgcgtgggcgatccgtacggcgacgggatgcctcccccgctgcccccgccgccgccgccggggatggttcccgtggagggcgaccggctgctcggcttgatccgggatcacggccgccctccgtttccgccgccgcctgggatgttgcacggcgaaccgtacccacctcctgatcggttcggctatggaggagggagaggctatcctcctcctccaaattatgacaatccctatgcgcatgaaggcagttttcccgattacgagcacgccgggaggtttccacctgcgcatgaaaggcttgccgccttaggttcaagttttgtgcctggaggacctcaggaggggtatttcaaccatgatcaccgctacaatcgcttccaacgctcggaatcgcctgttgcgccgccgctccctccaccggctcgataccctgaggcgagaagccgttatgattcccacggttggcatcctgaggcggatgttccaccaccaccaccaccactggagcctcctgtaccgtcttcctcagattaccatgccaagccacctttgcaggctgtgaaatcatctttgtttcctattcattccggttctccagccgcaactgcgcgcccacctagttctcatactttgcatcaagctcacctgatgcctaatgcaaatcgttacaatggacctatccacaatgaggtttatcttcttctctctgtgaacttgtgttcactggttatgattcaatactttcccgggcactcagaaagcagtacttgttgttgtacgaatgtttcaggtaccaggtttggcatatcaaccacacttagagcaacatttaggaggtggaaggcaaacccaagctcagcattccatcaacaatgctaaaatcagtgtaattagtgcctgtgacttgttcaagcagccacttcgtgggtcacggcctgatcatattgttatcatcctccgtgggctgccaggttttctcacaaccacttttatgtcccatatggctgattaagcattccaaagaacattgccgacactgttgacagttttgtatgctagccagtggccacagcgcttggttagactaattttgttatactatgcctcaaaaagcgttcatcttttgtgtggtagctttactgtacctgttgtttgttgagattgatctgaccttctctgcatataacacctgggagttgctgatgtttcttttatacttatcaaatgcctattttttcagttcacaaaacaatacacatgataagctcttttactactcttccattcataaatatatgttgtttctagaaatgcacactgcttcatctgacttcaatcatgatcttaatagaggcatttatattgatcaaactactaaaataacatcaataataaaccaatggttgaaatactttcatagtgctattattcttgtaacattttacaagcatatcatagtagacgatcagaaacttgtggtcaaattggaccatgaagattgtagacattgtctactgtccagagtgctcgtaacatttttttatctgattttgatacataactttttttcctcttattgcacgcaagcattatgatcatgatttaatagtctgcaagactgtcaatattttttactctgggaatttattcatatatatatctgtgttaccactgttacaatttataggtagtggaaagagctatcttgcaaaggcattgcgtgaccttgaagttgagaatggtggaaatgcacctagaattcattcgatggatgactatttcatgattgaggttgagaaggtcagttgaagaatagcagaacctatcatgaaccctgtacactaatttgtcacactatactcagaattgcttattacatttctgttttatttgatgggtattctgtcttgtaacttggtttaatgctcttagaaagttgaagacaatgaagggtcaaaatcttctagtacatccaaaggaagaaagcagctgaccaagaaagtgatcgagtactgttatgagcctgagatggaggaggtgatgaaatagtttttgtttgacttcattcctttatctcatttattatgaatgctattgccaattattggagctatgttatggcaaactgtttcatttgcctgaaaaattagtctttactcattagaactaatgtaaacctttagaaatgtcacattccccaggtttactttaaataacaatatcagagcacatcgcctagaagttgcagcactgggcattttgatgttgaaaggatatgatctcccagactgcagtatacttcataacccacatagatgtgtttctgttgtggaatctgtatactgtacatgggagtattgtccatcattcacattttcgataattgcagcatgagtaattgtttttttcatgtatttcactatttatcatttgatgtagtaattttgctaaatttcttctttattggacagacgtacagatcaagcatgttgaacgcatttaagaagacccttgatgaagggaattttacatttgtgattggtatgagttattttaaatattgttgctttaggatgaattaatgatttaatgatttaattcatggtggtggtaattactttggtggttatgattatgttctgcctcattatttatcataaatttcattgagtacggaaaaagccctatgcaaactttatcatatattcattgacatcatattatttcaatctattggcttttcttcatgattggatctttgtcttattaagttcaatgtttggtggccattttctgggattaggacataggcaatgggttcctagacattgggaggatgacaggacatccatttgtactagtggtttatgttttgtactgtttgaaacattcaattaagcaacaggcctacaatggcattgtaccgggtgatgccttcattcttagcaatggctgatgctggatttgtggtaactgacttgtttattgctggtatccctgcccgtttttagtggatgaccgcaatctgcgggtagctgattttgctcaattttgggcaagtgcgaaggtaaactctcagtctctgttgcgtcaactgtgagaatttacattgcttgttggagctttttgttaaggttttgaatccttaagaggggttctgctttttctccccttagaacaagaggtggcctgcacttgaaaagcatactttagtgcaaattataaggctggaaaacactattaacttatcttggatacactacgaatcttctattttctctttccttttttattaatggtctcttaatactactccctttgtttcaaaatataaggtatattttttttgctagcacaagactttgaccaacaattactctattaggatataatttttgtgacacgaaattgaatttgttagattcgtattcaaaagcacttaattatgattatgcttctgtatcacataaataatatcctaatagagcaattgtgggtcacagccttgtcctaacgaaacaaaacatgccttatattttgaaaaggagggaatattatagttatcctgctagcacccccttgacatatgtgtagtggatagtatgagaggcatagcattaagtaactgtcataaattaatgccctgtttggaaaccatttttttctttattcctgctggaattgataattcctacaagaattcgcgtcccaaagccttaattaatagcactgtgcatttattaccactaagacactaaggcagtccagtttattggacccttctctcccttctttgctgcaattgaatgtacctatacaccagaggggttatttggttgtttcttagtgcagacttatcgctagctgtatttctggtttctgtatgcaattaactgcatatatgtgctttctttcaatattacatggtttgcccaataatataaaccttttgctcgtttattttcaagggtttttggttatctgcttgttttacatgccctgaatcaactgtcgagttgctaaaatgaattcggtatttgtgtatccgtgtggttcttgatgcttcagttggtccaaagcatctttgacttccactttaatggcactattgacttcttagaatttagatgatatgcccatatgacaagtgaccgtttcatatgattgtaacttctagactaatctgtgcaaattttgttggattataccttgccatttcaggaggcactctgttcctataccttgttctttggaattttattctctgaatcattttatcttgttggtagtcatttgaaagtaagttcactgttctattccttttgtagaaatcaggctatgaagtgtacctgctggaggcaccatacaaggatccaacagtaagttttcttaactataagctatctaggcagtcctgggaaaatcatattgaatttatttgattcatatatgtatcaggctgtaaaaaatcttgtttgcactcccattagttatattaccaatatttacaccatatattataaacatctgagaatgtatttcagttccagtaagtacatgggtttacagtagatgatgtgatatcttgtgaacaacagggctgtgctgctaggaatgtgcatgggtttacagtagatgatgtgaacaagatggcagcagactgggaagaggctccaccactatatcttcgactagacatccatgtatgttttctgatagtattcatatgattggcggttaagacttaagacatgctattagatacatgattaatcgtgtttttcatgttttgtattaatatttttagtcattattcaacgatgacaatctacgcgagcattccattcaagaggtatcccatatcagtatatccctaccctaccagtcacttaaagagatctatgtgctcaaaatctattgtacttcaaataggtggatatggagacagaagacactgatggggccagtaacacagcaactagtactgaagctgaaaacacacagaaggctgtgtctgaatcactagataatggacatgatcaaggtacagattcctattattcttcagtgattagtgttggcattcctttgccacaatttattgtaacatttaaaccttcaaaactatgaggaaatactgtaagttactttacacataaatgtagaaagcctttttcttgttctgttgtgttagttagtacttataatacaaccaaatacttatttggcaatactgatgaaatgtggagagatcaaatcccctgcaaaacaagcactgtgggtttgaaatagatggttaaataagtgcaacagacaccctgccattgtgaatatcaataatagtaaacttgtactattcactgtaccatgaatgtggacccactgttctgatattgtagtgcatgcatcagcagtagcagactgttagtttgatttggaagttatccttaagcattaaaattataagaaacactataacggattcttagtgaaagtattaaggacatgttaagtcagacctgtaaaattctgtttagacatctcaggagcagggaagaagtgggactcgtcagaagaagacgacctggatggctacaaagagctaggacagagtaaatggtcaaaagattttgatgaggataccgagaagtctgaccatgcagaaggaagtacgcatgctctttctggattggctcaaacctacagcacgcatcgaaaaacagttacctggggagatcgggtatgcctttttgcttcaagggaaaaaatgcattgttttcttgcattttgttaatatcaaatattagcggcctatatttctgtcattgcaataaaccaatcactattaaacaactaccttgtatttctagggaattaaggacagattagtaggatagacaaatgaccacaataaccttatttaatgaacacaatacatacacacattccatatataaacttaattaaaaggaatgttgagagttgaaacaacaagttagagatgtgatggaaggaatggatattacaaggaaatatattttgatgtaattaatttgcttggtcctgcattagtagaaatacaatttttatgggatggagtacataactaatcgtatttgattgctcacttagtattacaaacacatatttgatgatacttataaaaagaagaggacaagtgatgcccttattgtccttctgcaacttcttattggtatgcatcatttaactagcctcccatattttctgttctttccttgcagctagaaaagggtggtttttctattggtgcagctaaaagaagactcacttcttcattaatcataggacccggatcagggtacaatttggtcagtggtctaattgacttattactaaagtttggtactttcgcagtctttaatctttctgcatgccctacgtagtttcataacttgatcctctatccttgtatctctttgccatcttatcctagttcttgcagaaaacgtgggtcatgagagtcattaataatggatcagacaatgttctaaaaggctctgcgatgtagagaaaacaattatatgctttgattttaacacttttaactttagaaacttcttcatctgcatactcaataaaaaaattacattcattctccaagtgctaatgttatgaaaattgattcttgtcagtgcttacagttgagggcttggggcagcacgttggctcttaaaaacctgtaagcatagatgatgtagcagaggcctttttgtgcgcggttgaagctgctgtagaagtagaacccatgctagtaaataacaaggcttaagcaaattcttttcgtctactgggcactggcacttgcttatagagggcacgcttttgaaactgctaaatggtgtgatttgtgcaaaagtttctgtaaataaatatatttttcaattttataatatttaatacttaactaaacatatcctaatgacttgtctcgttttttatgctgcacaagccctaacatctaattcgaacatagcctcagactcatctttcttagtttgcaagttagaagatcctcatgctcatatttggttaggattctgaaaggtttattagatggttgtttttcctgctttagccacatggtacaggaagacccatagataatgcatgcaggaagcccctcccttgacagttgggcagttcaatttattttcccattgcttgcaggtttccaaccccttggctgaagataattccaagcaggcaaagggggtaatcaacaccgatacaaagaagcgattcagcgaacaacttcgtgacgaaggtgaatccttcagggcagttttcgataagaggaggcagcgcgtcggagtttttggcaacggagatggcgagtgatcctcgacaagaagcctccaatggcctctctcgatggtcaggatactctaggcatggtttggccatcagttttgcttcggaatcagttttgcttcgttgcaattctgcggctcggaatgtactgctgctgcctggctcctttttcccaatttccccattcacacagttcacggagagcccttgttccggccttgtgccttgtccatgtgtacccctttggtcacaaacagaaggtaacggggaatgcagatttgtggcactgttgtatctgtaagctgtcccaatacccagaggctgctagttaaaaagcgcccccatagaatgtagcactatcagaaatgctcaattcttgttatttaatatagaggttttccagagtagtactatatttgtagtagtgttcttatcatgtagtctttacttattatgactgcagcctgatgtctataaatacaaggcacatggtaggaagagccatatatacctgtctgaaatttcagtactgttgattttcagtttgagtataaagtgtaccattcaatactctatatatgtgtgtctaaacatttgatgtgatgggtgaaaagttattgttttgggaac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0215000, RefSeq:Os02g0215000