Os02g0217800

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Revision as of 02:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0217800| Description = Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein| Version = NM_001052836.1 GI:115445042 ...")
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Gene Name

Os02g0217800

Description

Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein

Version

NM_001052836.1 GI:115445042 GeneID:4328735

Length

4899 bp

Definition

Oryza sativa Japonica Group Os02g0217800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6611328..6616226

Sequence Coding Region

6611328..6611595,6612147..6612205,6612381..6612431,6612666..6612798,6613433..6613518
,6613666..6613752,6613855..6613908,6614476..6614620,6615098..6615159
,6615270..6615357,6615545..6615628,6615720..6615881,6616000..6616226

Expression

GEO Profiles:Os02g0217800

Genome Context

<gbrowseImage1> name=NC_008395:6611328..6616226 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6611328..6616226 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccgccgccgtcgaagaaccgcggccacgttcccgcgccccggccgcctccgggcaagccgcctgggcgacggatggcgagccgggacgcggcggagcgggcggcgttcttcgcgcggcgcgaggcggccgcggtgctccgccgcgtgctccgcggggacgcgtccaggcgcgccgcgggctccatcaagtcgctcgtgtactccccctccgtccgcaacaagcgcgccaccttcgccctcgtctgccagaccctcaagtatcttccaattctaaaggaggttttagcatcaactggagtactaaccagtaaatggaagaaacaggaagaattagttttcgtgactgcctatgacattctctttggtcaggagacagcagcttctggatccgttgaacagttaattatgttacataaggatactattatggctgctcttgagaaaatgtgtattagaaggaaggttcgtagtgttgaagacttagtaagcaagaaaaggacagtcaaaccaaaacccaggtttcttcgtgttaacacactcaggaccagtacagattctgtcatcgaagaactgaacaaaatacacaaggttgataaagacgaattggttccggacttgttggtgctcccacctggaactgatttgcataaccaccatttggtctcagaaggaaaagggaaagcaagttgtatggtggcagttgcattatgccctgagccaggctggaaggttattgatgcatgtgcggctccagggaataaaacagtccatcttgctgcactcatgaatggagaggggagtattacagcttgtgaacttaataaagagaggaccaagactttgcaaaatactatccgaagatccggagcaaacaatattgaaacaatcaatggtgactttttggatatcgatagcaatgatccatcatatgccgaggtccgagctattctattagatccctcttgctctggttccggaatctctacagagagacttgaccatttgctcccttcgcactcaagaggtaatcaggatgatgcaagtacgagttcaaggataaggaaactctccgccttccagaggaaagcgctctcacatgctctgtcattcccctctgtggagagagtggtctacagcacctgctcaatccaccaagctgagaacgaggacgtcgtgagctccgtcctgccattggcgtcatcgctcggattcgagctcgctactccattccctcaatggcgacgccgtggtctccccgtctttgaaggatctgagcatctgcttcggacggacccggaggacggcctggagggcttcttcatatcgttgttcgtgaggaaagcagcagcagcagccgatgctgtaaagcctagcaatggtggtttgggagtgagcaagcaggtttttaagagacgtaacgggctcatggctttcggctcatcgagactgtccaggatgatgatgctctgctctacccggggtctctcgagaagatga</cdnaseq>

Protein Sequence

<aaseq>MPPPPPSKNRGHVPAPRPPPGKPPGRRMASRDAAERAAFFARRE AAAVLRRVLRGDASRRAAGSIKSLVYSPSVRNKRATFALVCQTLKYLPILKEVLASTG VLTSKWKKQEELVFVTAYDILFGQETAASGSVEQLIMLHKDTIMAALEKMCIRRKVRS VEDLVSKKRTVKPKPRFLRVNTLRTSTDSVIEELNKIHKVDKDELVPDLLVLPPGTDL HNHHLVSEGKGKASCMVAVALCPEPGWKVIDACAAPGNKTVHLAALMNGEGSITACEL NKERTKTLQNTIRRSGANNIETINGDFLDIDSNDPSYAEVRAILLDPSCSGSGISTER LDHLLPSHSRGNQDDASTSSRIRKLSAFQRKALSHALSFPSVERVVYSTCSIHQAENE DVVSSVLPLASSLGFELATPFPQWRRRGLPVFEGSEHLLRTDPEDGLEGFFISLFVRK AAAAADAVKPSNGGLGVSKQVFKRRNGLMAFGSSRLSRMMMLCSTRGLSRR</aaseq>

Gene Sequence

<dnaseqindica>1..268#820..878#1054..1104#1339..1471#2106..2191#2339..2425#2528..2581#3149..3293#3771..3832#3943..4030#4218..4301#4393..4554#4673..4899#atgccgccgccgccgccgtcgaagaaccgcggccacgttcccgcgccccggccgcctccgggcaagccgcctgggcgacggatggcgagccgggacgcggcggagcgggcggcgttcttcgcgcggcgcgaggcggccgcggtgctccgccgcgtgctccgcggggacgcgtccaggcgcgccgcgggctccatcaagtcgctcgtgtactccccctccgtccgcaacaagcgcgccaccttcgccctcgtctgccagaccctcaagtgtaagcctcactcgcatcgatgccccccctcgtttcgctgttgcgtgcaaggtgttcgatggaatgccagtgccgagctgtgttgctgcgtcctctcaacttggatttggatatcctattactgccatcctatgtgtcgcatgaaatggtcgtgtgggaatgagtgccaggtgtttgtgccagttttcttctcgtttgtccatactgcacaatgcaagaggttattttctggaaacattaaagacaacttcactacctagcctccagagttgctctgatatggataatacatcttggtaatcagcatcacaaataacattttagcatcactcacagaactttggtggtaaaaatgccaactgttagataaccccatacacactgtttttcctagatttggatggtaattgagagctggggagtaaaacctcagtttggtatactgtacacttaaaaaataatctgctatactgtacacttagaaaatacctcagtttggtcctttttctgtattcactcctctcctcatgttgctctatttcctttatcagatcttccaattctaaaggaggttttagcatcaactggagtactaaccagtaaatggaaggtcagttagacacttcgtatgttgtgatggaataatggaattgaattccttctttgtgtacagtattgttatctgtgtggtgttcacatgttagctttagtcatgcctcttaagttgcaacatagaatacctgcatggtgcaaaacatcaactgactttttttttcaacttgcagaaacaggaagaattagttttcgtgactgcctatgacattctctttggtcaggtttgtcagttactcaaccctttagattcaacatattacttccacagtctgtgcatttgttttgtttaacctttcagttgtggagttcagatcttgtagccacaaaatggttaaacttttgcattgcacttgattacataacagttctgcatgtcattgaagctcacaagatagttcatttctcctgtccctattaaaataaacaataacatgaaatgatattgatacttgtaggagacagcagcttctggatccgttgaacagttaattatgttacataaggatactattatggctgctcttgagaaaatgtgtattagaaggaaggttcgtagtgttgaagacttagtaagcaagaaaaggacaggtacttctctccgctctgttcttttgaagcttttcattcattattcctgttatatgatatgattacttctaaatgcttctctcagccatctaattagcctgcccttccaaaatcaaatgcattagtcgatgtttaaattttttgtagcagttaaaagaagtgctagtctgtaatgaagcatgtaattacactgtataattagaatgtgctacaaacttacacttgcatttgcagagcatctcagttcaattttgtcaatactcaatatacattgttcatgtaatgtttcatataataggtagcttatgagttcatttccttttgtccatgtacagttgatttgttatgacaattgacatattatggccagctctgtttaacctgttggttttatttttagcaataccatcacagataatagttaatagcaccagtcgcatttgcacccggaaaaaccgacttggttttcaaaattaggatcataacaatgtttgaaaataagtgtattaattgaatttgtgcatatgttttggtttctacatattaattacatatggtcctcactaagcttaaatcatatgctaatagaggaattgtattcatacaagctactcactgttatccctttcttcagtcaaaccaaaacccaggtttcttcgtgttaacacactcaggaccagtacagattctgtcatcgaagaactgaacaaaatacacaaggtacttcatccatcttcatgtttagcaagcctgttgctgtaaggaacagtctaagcaattcttccggaaactactgctgtaaatgcaaccttattttcaaattgtactacttgtgagactcgactaatttcattcagtattgagtaggttgataaagacgaattggttccggacttgttggtgctcccacctggaactgatttgcataaccaccatttggtctcagaaggaaaagtatttttacaagtgaagtcttgtatttctatagcgtttactcttgaatgacctatgaataataccgattgcctttttcctcatctttaactcctttcacaggggaaagcaagttgtatggtggcagttgcattatgccctgagccaggctggaaggttagtgcattcgatctggctggactaaaatttcattaatatttattattatcttgaaactatttgcagccaaagatctacagccctaaaaggaaggcagcatatgttcttgatagatgctaagtagcagtagtaaactagtttattaccctgcctttcctgtatgcttgcttaattaaatgatggatatgactttacataaataagattttaatatcatctgaattacagtactacctatgttagtgcgtagcaataaatactccattgattttgattattctatggcatgagtttttggtaatgctgaaattgctggtatgaattgagcatacaaaataatactagtagctatgtgtttacttaaaatctatatactatttctcactttgcaaataaataagtctatatgcttttttttttgttttcatcttttgtttttgtcatggatttggaaaaaaaattgtagcatcacaatatttccagtcaaacaacattactttgattgtattgctttttagttacatcatattaaatcattaatttccacttgaacattaaacttaggttattgatgcatgtgcggctccagggaataaaacagtccatcttgctgcactcatgaatggagaggggagtattacagcttgtgaacttaataaagagaggaccaagactttgcaaaatactatccgaagatccggagcaaacagtatcctctctttaagtttctggttttaatgaccttgatagtgtatttttgcacattgttttgctgttaacacatccttctcaccatacttttagtttaaactagatcaatttattttttcaagtttgcatagtttctgctgtaactaaaatatccaatgatccttttggaccttcagtataagcttgttctgaaggaatttctagatatgctacttaagttgatgattaaaacattccgcctcccttagattggggtgttaatttctttgtagaaaacatactataacctcctgcttgcatcttaactttaatacgttttctcgatatgatcataaattgtcttgatgatatgtagtttgttcttctgtttcccaagttctatgtctgtttgtacttatttactatacattgtctgttatgtcttacaaagttcatgacatattatgaaactcattttccttgaccaattgattagatattgaaacaatcaatggtgactttttggatatcgatagcaatgatccatcatatgccgaggtttgtaggagttattgataaatattttagacgtcttgtagccttttgcttgcctcatagcacagctgtccctaattttgtgtgttcctatgagatgatgattgctgcaggtccgagctattctattagatccctcttgctctggttccggaatctctacagagagacttgaccatttgctcccttcgcactcaagaggtaactacaggttgataacttgtatattcataccctgtccaattaaaaacttttttgcatgatttgcgatgagcttagtatttactgtgtgcaatgtatgagtttgccacgatgatatgcatcctatccttgcattcatggaatttttgagggaaacatttgcactgaatgaaatcttgatacgcaggtaatcaggatgatgcaagtacgagttcaaggataaggaaactctccgccttccagaggaaagcgctctcacatgctctgtcatgtaagtccctcctctttttctgtatccaatcttaacatgtcaatggacatcatctgcacaattctgaagcttccctccacctcttgcccagtcccctctgtggagagagtggtctacagcacctgctcaatccaccaagctgagaacgaggacgtcgtgagctccgtcctgccattggcgtcatcgctcggattcgagctcgctactccattccctcaatggcgacgccgtggtctccccgtctttgaaggatgtaggtgttctatacctcaaatttcaaccatgatcagtcctggatgacaatccattgacgagtaaaaaaaaaaaaaacctctagttcttcatggctttggctttgcgcttgtgtgcagctgagcatctgcttcggacggacccggaggacggcctggagggcttcttcatatcgttgttcgtgaggaaagcagcagcagcagccgatgctgtaaagcctagcaatggtggtttgggagtgagcaagcaggtttttaagagacgtaacgggctcatggctttcggctcatcgagactgtccaggatgatgatgctctgctctacccggggtctctcgagaagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0217800, RefSeq:Os02g0217800