Os02g0218200

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Revision as of 02:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0218200| Description = Peptidase M1, membrane alanine aminopeptidase family protein| Version = NM_001052838.1 GI:115445046 GeneID:4328737| ...")
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Gene Name

Os02g0218200

Description

Peptidase M1, membrane alanine aminopeptidase family protein

Version

NM_001052838.1 GI:115445046 GeneID:4328737

Length

7292 bp

Definition

Oryza sativa Japonica Group Os02g0218200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6628225..6635516

Sequence Coding Region

6628327..6628563,6629146..6629291,6629467..6629569,6630307..6630493,6630599..6630692
,6631190..6631343,6631651..6631755,6631837..6631953,6632148..6632261
,6632791..6632973,6633107..6633386,6633465..6633586,6633663..6633760
,6633841..6634018,6634339..6634453,6634556..6634623,6634725..6634802
,6634886..6634960,6635056..6635238

Expression

GEO Profiles:Os02g0218200

Genome Context

<gbrowseImage1> name=NC_008395:6628225..6635516 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6628225..6635516 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggagcagagcgcggagcagttcaggggccaggcgaggctcccggggttcgcggcgccccggcggtacgacctgcggctcgtccccgacctcgacgggtgcgccttcacgggatctgtggacgtctccgtcgacgtcacggcgcccaccaggttcctcgtgctcaacgccgccgagctcgaggtctcccccgggggcgtccagttcaagccccatggcgccgagcaggagctgcacccagcggaggttaccaatgtgccagaggatgagatcctgattatccgcttcaatgaggttcttcctgtaggggagggaactttagtaattgcattcaagggaactctgaacgacaagatgcatggcttctacagaagtgtgtatgaactcaatggggagaagaagaacatggcggtaacccagtttgaacctgctgacgcaaggcgttgttttccttgttgggatgagccctcttttaaggctatattcaaaattactctagaagttccgtctgagaccgttgcattgtcaaacatgccagtggttgaagagaaggtcaatggccttatcaaagctgtctattttcaagaaacaccaataatgtcaacatacctagtggctgttattgttggcatgttcgactatgtggaagctttcaccactgatggcactagggttcgtgtttacactcaagttggcaagagtgcccagggaaagtttgcactagaggttgctgtgaagacactggtcctcttcaaggagtattttgctgtgccatacccactcccaaaaatggacatgattgccattcctgattttgcctctggagcaatggagaactatggcttggttacatatcgtgaaacagctttgttatttgatgagaaacactctgcagctgcgaataagcaaagggttgcagttgtggtagcccatgaattagctcaccagtggtttggaaatcttgtgacgatggagtggtggacacacctatggcttaacgagggttttgcgacatgggtctcctacttagctgcagacaatttctttcctgaatggaatgtttggacccaatttcttgaggaatctacaacaggtttcaagttagatgcccttgcagggtcacatccaattgaggtcgacgtaaatcacgttgatgaaatagatgaaatatttgatgctataagctacaggaaaggagctgctgttattcggatgctgcaaagctatcttggggctgaaacttttcagaaatctctggccgcatacatcgaaaagttcgcatattcaaatgccaagactgaggacttgtgggctgcccttgaagaggggtctggtgaaccagtgaaaacattaatgcattcatggacaaagcagcaagggtaccctgttgttaatgtgaagctcaaggatggaaagctagagatggagcagacacagttcctatcaagcggggctgaaggagttgggcaatgggtggttcccatcacactgtgttgctgttcgtactcacgtcaagagaagttcctttttaatggaaagcaagaggattttaatttgtcagggcttgtagaatgtcaaaagaaagaagacttctggattaaacttaatgtcaatcagactggcttctatagagtgagctatgatgaggaacttgcatctcgacttagatatgcaattgaagccaacaaactgagtgcagcagacagatatggtgtacttgatgacacatatgccctctgtatggctggcaaacagaagctagtctccttattgcatttgattgctgcgtacaaggatgaaaccgagtatactgtgctcgcccgtgtcatagatacaagtctgagcattgtcgagatggtggctgttgctgctcctgaggggttgggcaagctgaaaaagttcctgattgactttcttgagccatttgcacagagaattggttgggatgctaaaagcggtgagggtcacttggatgcattattgagaggtacacttttaactgctctggcagaacttggccatgaagctacaataaatgaagctgtacgccgatttaacatctttgtggaagatagagaaacaccactactccctccagatgttcgaaaggcggcatatgttgctttgatgcagacagtgaacaaatcaaacagagccggctatgaatcactattgaagatctataaagaaactgatctgagccaggaaaaagtcagaattttaggttctctagcatcttgccctgatcctgatgttgttcgtgatacactggacttcatgctgtcacctgaggtgaggaatcaggactctatatttttgcttagaggagtcggtgcagcgggacatgaggtggcatggacatggttgaaggaaaagtgggactacatttcagacaccttctctggaactcttctcacctatttcgtttccaccaccgtctcaccgctgcgcaccgatgaaatgggcgacgacgcggaggagttcttcaagagcaggacgaaggccaacatcgcgaggacggtgaagcagagcatcgagagagtgaggatcaatgccaaatgggtggagagcaccagggccgaggctaacctgggcaatgtcctcaaggaaatttctcacgaccactga</cdnaseq>

Protein Sequence

<aaseq>MAAAEQSAEQFRGQARLPGFAAPRRYDLRLVPDLDGCAFTGSVD VSVDVTAPTRFLVLNAAELEVSPGGVQFKPHGAEQELHPAEVTNVPEDEILIIRFNEV LPVGEGTLVIAFKGTLNDKMHGFYRSVYELNGEKKNMAVTQFEPADARRCFPCWDEPS FKAIFKITLEVPSETVALSNMPVVEEKVNGLIKAVYFQETPIMSTYLVAVIVGMFDYV EAFTTDGTRVRVYTQVGKSAQGKFALEVAVKTLVLFKEYFAVPYPLPKMDMIAIPDFA SGAMENYGLVTYRETALLFDEKHSAAANKQRVAVVVAHELAHQWFGNLVTMEWWTHLW LNEGFATWVSYLAADNFFPEWNVWTQFLEESTTGFKLDALAGSHPIEVDVNHVDEIDE IFDAISYRKGAAVIRMLQSYLGAETFQKSLAAYIEKFAYSNAKTEDLWAALEEGSGEP VKTLMHSWTKQQGYPVVNVKLKDGKLEMEQTQFLSSGAEGVGQWVVPITLCCCSYSRQ EKFLFNGKQEDFNLSGLVECQKKEDFWIKLNVNQTGFYRVSYDEELASRLRYAIEANK LSAADRYGVLDDTYALCMAGKQKLVSLLHLIAAYKDETEYTVLARVIDTSLSIVEMVA VAAPEGLGKLKKFLIDFLEPFAQRIGWDAKSGEGHLDALLRGTLLTALAELGHEATIN EAVRRFNIFVEDRETPLLPPDVRKAAYVALMQTVNKSNRAGYESLLKIYKETDLSQEK VRILGSLASCPDPDVVRDTLDFMLSPEVRNQDSIFLLRGVGAAGHEVAWTWLKEKWDY ISDTFSGTLLTYFVSTTVSPLRTDEMGDDAEEFFKSRTKANIARTVKQSIERVRINAK WVESTRAEANLGNVLKEISHDH</aaseq>

Gene Sequence

<dnaseqindica>103..339#922..1067#1243..1345#2083..2269#2375..2468#2966..3119#3427..3531#3613..3729#3924..4037#4567..4749#4883..5162#5241..5362#5439..5536#5617..5794#6115..6229#6332..6399#6501..6578#6662..6736#6832..7014#aaaaaaccgcaaaatctcaccgaatctttcgccgtctccgaggcttgcacaactcttcttcctcatcttccgccgcgggcggcgacggcggcggcggcggccatggcggcggcggagcagagcgcggagcagttcaggggccaggcgaggctcccggggttcgcggcgccccggcggtacgacctgcggctcgtccccgacctcgacgggtgcgccttcacgggatctgtggacgtctccgtcgacgtcacggcgcccaccaggttcctcgtgctcaacgccgccgagctcgaggtctcccccgggggcgtccagttcaagccccatggcgccgagcaggtagatatagattcgctttggtttctccctggcgctttgggtggtggccggccgtgggttcgatctactcgcgtgagggtggggggtttgggcgtgacaggtatatgttgttttcggtggattaagggtttgatctctcgagtcgaaaaattagggggaagttgacatttacttcagttatcggaacttgttagggcttatgtttttttttctactaaaaatgtctttggatatttcgatctttttatagcctttattgtaggcctcatgatcttgcatcctaagggttttagatttagatagggggtcgttgccgcagttgaaagtgtcaggaaatcgggatgtgatttaattatttagaatactcataataagtagaaggcctgtgcttgtaatagttagcttcaatttaaggtttgtgtttccatatctttaatttggtaggttgaggttagagccaaaataatgatggctaggaagtagcgatctttatttttttgggccgaggatggttttgcaaataatatcctagcattttgttatgtattttcttcataaggatcgttttatcttttgcattaggagctgcacccagcggaggttaccaatgtgccagaggatgagatcctgattatccgcttcaatgaggttcttcctgtaggggagggaactttagtaattgcattcaagggaactctgaacgacaagatgcatggcttctacagaaggtactcattttgtggtgaaaaggtttacttgtaaatattttgtctcatgtacataaactctgtaaatatcttttattaaatcttaatatactgtgggggcctctcctccctggtttaaaaaagtttatttgtaaattaataaatatatatatgtaatgtattgtgttgtctctagtgtgtatgaactcaatggggagaagaagaacatggcggtaacccagtttgaacctgctgacgcaaggcgttgttttccttgttgggatgagccctcttttaaggtctacacttccttgcctttttttttgactcctggtatctcaagctagtactatatgtgttatttttatttctgcttcatggggaataagtgttttgggccatgcatggtgcttacgttcaatctcactcagtgtgatgtctagttgaggacaaaacaaattatgtccctaaatggacatattgtgccacgtgggcttcagttcttcttgttatcgcttcatggagtccatggaattttttttggtgctatctcatttgttatccccaagtttgatggttaggatttaaattcgttagggttagttatgtattttcacttttttttttaccttccatagctttggatgatataaactgaacagtcactccacatgttcgattcatccttaaactctagggtatagactgattacatgttgcctgatttcatctttatatatgagttatgagtagacgagtgtctagtgcccattggatataatgatatagagcagggcatgcattgtttgattttgttgctcattttctgaacctatgccatatttgttttccttctggaatcaaaataggtctagaataacatctgcagttcatcctttaccataccaaagaaaactacatcctgactctctgcaccaactggttaaaagtgcatatgaagaggagttaaatattaagggactttaggttaaacagaaaatataatgtgggtttaatctctccttcttcgttacaggctatattcaaaattactctagaagttccgtctgagaccgttgcattgtcaaacatgccagtggttgaagagaaggtcaatggccttatcaaagctgtctattttcaagaaacaccaataatgtcaacatacctagtggctgttattgttggcatgttcgactatgtggaagctttcaccactgatggtactgtaactctttcattatctcactatcacacctattttagctttcacctttttgtggctcatgtcttgaatttaattggccttgtctttattttactttcaggcactagggttcgtgtttacactcaagttggcaagagtgcccagggaaagtttgcactagaggttgctgtgaagacactggtcctcttcaaggagtaattatctgttcctctgccttagtattgattatttgattagcagagttatcttgtgcagttatgctgctattacagtgctcattagacattgattatttttgataccagtagtattgctgaggaatttctggaacttgtcgttgccaaataaatgccattgaatgatacttatatagtctgcctctctctctctctctctctctctctctctctctctctacatatgcaaatctgcaaactttaacttctgcaggttgacagatatatttcattctattggaaaaccttttttctatatctattagagtcaaatcaaatattacattatgagctatttctggatgttatgagttttagaagaggcattcaaatgatgtatcatttcatagttatataatttgaggaactgttaagacttgagacatatgcatcaacccttaattgacttactgtcataaatgatccagctgatgacaattcctttatgttgctaggtattttgctgtgccatacccactcccaaaaatggacatgattgccattcctgattttgcctctggagcaatggagaactatggcttggttacatatcgtgaaacagctttgttatttgatgagaaacactctgcagctgcgaataagcaaagggtaggacactattttaattttattattttgattatttatgctaagattgcaatatgattcatggtcaccattacacatgatttatccacccaatttgatttatcagctaaacaaatgttgatctgatggtgtgaccagaaatttttcttatcagcaaattaataactggatagtacaccgatgggtcctttgagtcatcatttaaagatttaataatttctgatattcatatctgttttggttgtcatgtttaattgataccatccttctgtaagatacgtagctaatctcttattccactgttcaggttgcagttgtggtagcccatgaattagctcaccagtggtttggaaatcttgtgacgatggagtggtggacacacctatggcttaacgagggttttgcgacatgggtaagaacaaaacaatcaagagtacaaatatatagaaaatttacatttttatgttgctcatttgattttttccttttgcaggtctcctacttagctgcagacaatttctttcctgaatggaatgtttggacccaatttcttgaggaatctacaacaggtttcaagttagatgcccttgcagggtcacatccaattgaggtaatgtttgatatatagctgcatatttctaataataggtttgttttcatctaactgttttttcagtttcatttaagttttcttaaaaagcacttaaaaaattttactatacttttgatgccagtgttaccaagatctttcattgcaaacttacactaagacttacatcgcaaatttatgtatgctattttcaggtcgacgtaaatcacgttgatgaaatagatgaaatatttgatgctataagctacaggaaaggagctgctgttattcggatgctgcaaagctatcttggggctgaaacttttcaggtttgtgatgcatgtactagtgtgctgccccatgtagtgctacagttttcaaataaatacgtactgtaaattctaattttacaaaacaccaaacgactatcttcaaatctaaaactaaactggccaagtaggcatgtacatacatacatgtgtacatggtttaatatttaaaaagatcttacaaatgatacactctttgattatataaccacaggattagcataaactcactataactaccgctggtcctcttttaaattctagaccagagatgttccctttgttattttggaaaatacaaatggatggcagaatggtcgctttttatatttgtttttttaaagactgtttatcagcctgcataagctttttattaggaccttaatatttgcagtagtatgttacctgaggaattaactaggcgcagaattagttattactaataatattctttggaacacaagtttgcatgaggtttcattttttgcttctcattggaaataagaagtttgtttgttctttttgctagaaatctctggccgcatacatcgaaaagttcgcatattcaaatgccaagactgaggacttgtgggctgcccttgaagaggggtctggtgaaccagtgaaaacattaatgcattcatggacaaagcagcaagggtaccctgttgttaatgtgaagctcaaggatggaaagctagagatggagcaggtaagactttcctttcttttttcactataaggtggacttccttccctctatctaaccctttttgcatcctaaaaaaatattattgtttctatttggaggatttgtgattagcacctggtcttatctcttgcagacacagttcctatcaagcggggctgaaggagttgggcaatgggtggttcccatcacactgtgttgctgttcgtactcacgtcaagagaagttcctttttaatggaaagcaagaggattttaatttgtcagggcttgtagaatgtcaaaagaaagaagacttctggattaaacttaatgtcaatcagactggcttctatagagtgagctatgatgaggaacttgcatctcgacttagatatgcaattgaagccaacaaactgagtgcagcagacagatatggtaaagttcttacagaagcatcttataagtggatgttaccctgcccaactgttcttacaatattattgtttggtacaggtgtacttgatgacacatatgccctctgtatggctggcaaacagaagctagtctccttattgcatttgattgctgcgtacaaggatgaaaccgagtatactgtgctcgcccgtgtcatagatgtatagatctttctacccgacaaatgtttttgttagattgattctgttctaagcatttcaattcttggcttgatagacaagtctgagcattgtcgagatggtggctgttgctgctcctgaggggttgggcaagctgaaaaagttcctgattgactttcttgagccatttgcacagtaagttctgtatgatgccattccatagtggaagaatattttgttctacaacctcctaaacattcaggaatcctttgcaggagaattggttgggatgctaaaagcggtgagggtcacttggatgcattattgagaggtacacttttaactgctctggcagaacttggccatgaagctacaataaatgaagctgtacgccgatttaacatctttgtggaagatagagaaacaccactactccctccagatgttcgaaaggttagcattgtaatttactgcacattatgttggggttatttgttaattttatatctcattaacaggaatagtgttatttgttaattttatatctcattaatgaagttgagtttgttcatgaaactttgtagggttgtttatttacatattacctacatgtgtgattctttttgagattttttgaaaattttataaaaaagtttccaagtttctgcctaagatgtggtttccaccatgtatttttcccatttgtatagctatgtaactatgcgaactatctgcactcagatcttctttttaaccatcttcctgttttgtaggcggcatatgttgctttgatgcagacagtgaacaaatcaaacagagccggctatgaatcactattgaagatctataaagaaactgatctgagccaggaaaaagtcagaattttaggttagtcaaatatgcatttaatatttattttgacataggtgacattgtctgtctgaagttgggacttgggaccttttataagttctgttcctccttatgtaggttctctagcatcttgccctgatcctgatgttgttcgtgatacactggacttcatgctgtcacctgaggtaaatacgggaatcagtaaacaccttcacattctacatgatacagccaaaactttatctcatgtgataagcataactcacaacattttatgaatgaacaggtgaggaatcaggactctatatttttgcttagaggagtcggtgcagcgggacatgaggtggcatggacatggttgaaggtgcttacaaatatgttattttcctcgattcgcctttctacttcctgtttcttctactgacaccatgcttctttatggttcaggaaaagtgggactacatttcagacaccttctctggaactcttctcacctatttcgtttccaccaccgtctcaccggtacacagtacaccttattttcaacgtgctcacatacacatgccattatcgttacattgtaaattttcctgactcggtgtcgaaaattgttccagctgcgcaccgatgaaatgggcgacgacgcggaggagttcttcaagagcaggacgaaggccaacatcgcgaggacggtgaagcagagcatcgagagagtgaggatcaatgccaaatgggtggagagcaccagggccgaggctaacctgggcaatgtcctcaaggaaatttctcacgaccactgagacgaccgatcttttcctgcgccgttgtcttagcgtgtaagatgcgtactctccagcaacaagttagtaataagaacttggtgggttagacgacctgttgcatgcccctgatacttgcatctatggaccagtttctccaggttatgtcagtttgatagatgcaattgcaatttgcatggagtatttgatagggacatccggacatgaattgcatgcaaatgttgccctggcagttcaacattgccagaatctgggaaattaatgagcatctttcgtac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0218200, RefSeq:Os02g0218200